Oncorhynchus mykiss (rainbow trout): 110516816
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Entry
110516816 CDS
T07259
Name
(RefSeq) cullin-associated NEDD8-dissociated protein 1 isoform X1
KO
K17263
cullin-associated NEDD8-dissociated protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110516816
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110516816
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
110516816
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110516816
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIP120
HEAT_EF3_N
HEAT_EZ
HEAT_2
TOR1L1_N
HEAT
UME
MMS19_C
Adaptin_N
INTS7_N
Vac14_Fab1_bd
mTOR_dom
ARM_ARMC5
Cnd1
HEAT_DAAF5
Tti2
VHS
MMS19_N
Dcc1
V-ATPase_H_C
Motif
Other DBs
NCBI-GeneID:
110516816
NCBI-ProteinID:
XP_036812523
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All DBs
Position
21:4384016..4441236
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AA seq
1234 aa
AA seq
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MASASYHISNLLEKMTSSDKDFRFMATNDLMSELQKDSIKLDDDSERKVVKMILKLLEDK
NGEVQNLAVKCLGPLVSKVKEYQVETIVDTLCTNMLADKEQLRDISSIGLKTVIGELPPA
SSGSALAASVCKKITGRLTSAIAKQEDVSVQLEALDIMADMLCRQGGLLVNFHPSILSCL
LPQLTSPRLAVRKRTIIALGHLVMSCGNLVFVDLIEHLLSELSRNDSMSTTRTYIQCIAA
ISRQAGHRIGEYLEKIIPLVVKFCNIDDDELREYCIQAFESFVRRCPKEVYPHVGTVISI
CLKYLTYDPNYNYDDEDEDENAMDADGADEDYQGSDDEYSDDDDMSWKVRRAAAKCLDAV
VSTRHEMLPEFYRTVSPALIARFKEREENVKADVFHAYLSLLKQTRPAQSWLCDPDAMEQ
GETPLTMLQNQQVPMIVKALHKQMKEKSVKTRQCCFNMLTELVNVLPGALTQHIPVLVPG
IIFSLNDKSSSSNLKIDALSCLYVVLCNHQPQVFHPHVQALVPPVVACVGDPFYKITSEA
LLVSQQLVKVIRPLDQPERDTFDASPYITDLFTCTIKRLKAADIDQEVKERAISCMGQII
CNLGDSLGDDLPGTLHIFLERLKNEITRLTTVKALTLIAGSTLKIDLRPILDEAVPILAS
FLRKNQRALKLSTLAALDILVKNYSDSVTPAMIDAVLAELPPLISESDMHVSQMVISFLT
TLARVHPLSLAKIGGSSILSELISLVRSPLLQGGALSAMLEFFQALVGTGTSSLGYMDLL
RMLTGPVYAQSAALTHKQSYYSIAKCVAALTRACPDEGPAVVGQFIQDVKNSRSTDSIRL
LALLSLGEVGHHVDLSGQPELKTVILDAFSSSSEEVKSAASYALGSIAVGNLPEYLPFVL
GEISGQPKRQYLLLHSLKEIISSASVTGLKLYVEGVWTLLLKHCECAEEGTRNVVAECLG
KLTLIDPETLLPRLKGYLLSGSSYARSSVVTAVKFTISDHPQTIDPLLKNCIGDFLKTLE
DPDLNVRRVALVTFNSAAHNKPSLIRDLLDTVLPHLYNETKVRKELIREVEMGPFKHTVD
DGLDIRKAAFECMYTLLDSCLDRLDIFEFLNHVEDGLKDHYDIKMLTFLMLARLSTLCPS
AVLQRLDRLVEPLRATCTTKVKANSVKQEFEKQDELKRSAMRAVVALLTIPEAEKSPLMS
EFQSQISSNPELAAIFENIQRDSSSANMESMDTS
NT seq
3705 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgcctcgtaccatatctctaatctattggaaaaaatgacatcaagcgacaag
gatttcagattcatggccaccaacgacctgatgtcagagctgcagaaagactccatcaag
ctggacgatgacagtgaacgcaaggtggtcaagatgatcctcaagctactggaagacaaa
aacggagaggtccagaatctggccgtcaaatgcctgggcccgttggtcagtaaggtgaag
gagtaccaggtggagactatagtggacacactgtgtaccaacatgctggcagacaaggag
cagctccgagacatctccagcatcggactgaagacggtcataggagaactgcccccggcg
tccagcggctcggccctggctgccagtgtgtgtaaaaagatcacaggccgtctgaccagt
gccatcgccaagcaggaggatgtgtcagttcagctggaggctctggacatcatggctgac
atgctctgcagacagggtggtctcctggtgaactttcacccctccatcctgtcctgcctg
ctccctcagctgaccagcccccgcctggcggtgaggaagaggaccatcatcgctctgggt
cacctggtcatgtcctgtgggaacctggtgtttgtggacctgattgaacacctgctgtca
gagttgtctcgtaacgactccatgtccaccacccgtacctacatccagtgtatcgcagcc
atcagcagacaggccggacacaggatcggtgagtacttggagaagatcattcctctggtg
gtgaagttctgtaacatagacgacgatgagctgagagaatactgcatccaggccttcgag
tccttcgtcaggaggtgtccaaaggaggtttatccacatgtgggcactgtcatcagcatc
tgtctgaagtatttgacctacgaccccaactataactacgatgacgaggatgaagatgag
aatgccatggatgccgacggagcagacgaagactatcaaggaagtgatgacgagtacagc
gacgacgacgacatgagctggaaggttcgccgtgcggccgccaagtgtctggacgccgtg
gtcagcacacgtcacgagatgctgcctgagttctaccggaccgtgtcgcccgcgctcatc
gcccgcttcaaggagcgggaggagaacgtgaaggctgacgtgttccatgcctacctgtcg
ttgctgaagcagacacgtcctgctcagagctggctgtgtgacccagatgccatggaacag
ggagagactccactcaccatgctgcagaaccagcaggtgccaatgatcgttaaggccctg
cataagcagatgaaggagaaaagtgtcaagacacgacagtgctgcttcaacatgctgacg
gagctggtcaacgtgctgcctggagccctcacacaacatatccctgtcctcgtaccagga
atcatcttctctctcaacgacaagtccagctcgtccaacctgaagatcgatgccctgtcc
tgtctgtatgtggtcctgtgtaaccaccagcctcaagtcttccaccctcatgtccaggcc
ctggtgccgcccgtggtggcgtgtgtaggagaccccttctataagatcacctccgaggcc
ctgctggtcagccaacagctggtcaaggtcatcagacctctggaccagccggagagggac
accttcgatgcttctccctacatcactgacctcttcacctgcaccatcaaacgcctcaag
gctgccgacatcgaccaggaagtgaaagagagggccatttcctgtatgggtcagatcatc
tgtaacctaggagacagcctgggggacgacctccctgggacgctgcacatcttcctggag
cgactgaagaatgagattaccagactgacgacggtcaaggccctcacgctcatcgcaggc
tccacgttgaagatcgaccttcgacctatcctcgacgaggcggtgcccatcctggcgtcg
ttcctgcgtaagaaccagcgggcgctgaaactgagcaccctggccgcgctggacatcctg
gtgaagaactacagcgacagcgtgactccggccatgatcgacgccgtgctggccgagctg
ccgccgctgatcagcgagagcgacatgcacgtgtcccagatggtcatcagcttcctgacc
accctggcccgggtccaccctctctccctggctaagatcggggggtcgtccatcctctcg
gagctcatctctctggtcaggtctcctctgctgcagggaggggccctcagtgccatgcta
gagttcttccaggctctggtgggtaccgggacatcctctctgggttacatggacctgctc
cgtatgctgaccggtccagtctacgcccagagtgctgctctaacacacaaacagtcctac
tactctatcgctaaatgtgtggccgccctgacccgcgcctgtcctgatgagggtcctgct
gtggtaggccagttcatccaggatgtgaagaactctcggtcgacagactccatcaggctg
ctggccctgctgtcactgggagaggtgggacaccacgtagacctgagcggccaaccggag
ctcaagacggtcatcctggacgccttctcttcctcctccgaagaggtcaagtctgccgca
tcctacgccctgggatccatcgccgtgggcaacctaccggaatacctgcccttcgttctg
ggggagatctcgggacagcccaagaggcagtatctgctgcttcactcgctcaaagagatc
atcagctcggcgtccgtgacgggtctgaaactttatgtcgagggtgtgtggaccctgctg
ttgaagcactgtgagtgtgccgaggagggcaccaggaacgtggtagcagaatgtctgggg
aaactcaccctcatagacccagaaaccctgctgcccagacttaaaggatacctgctctca
ggatcatcatatgccagaagctcagtcgtgacagcagtgaagttcaccatctcagaccac
ccacagacaatagaccctctcctgaaaaactgcataggtgacttcttgaagacgttggag
gacccggacctgaacgtgcggcgggttgccctggtaaccttcaactccgcagcccataat
aagccctctctcatcagagacctactggatacggtcctgccacacctctacaacgagacc
aaagtccgcaaggaactcatcagagaggttgagatgggtccctttaaacacacagtggac
gatggtctggacataaggaaggcagcgtttgagtgcatgtacacactcttggacagctgt
ctagacagactagacatctttgagttcctcaaccacgtagaagacggactcaaggaccat
tacgacatcaagatgctgacgttcctgatgctggctagactctccactctgtgtcccagt
gctgtgctacagaggctggacagactggttgagccgctacgtgccacctgcaccaccaag
gtgaaggccaactcagtaaagcaggagtttgagaagcaggatgagttgaagcgttcagcc
atgcgggcggtggtcgccctcctcaccatccccgaggcggagaagagtcccctgatgagc
gagttccagtcccagatctcctccaaccccgagctggctgccatctttgaaaacatccag
agagactcgtcctccgctaacatggagtccatggacaccagctaa
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