Oncorhynchus mykiss (rainbow trout): 110516860
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Entry
110516860 CDS
T07259
Name
(RefSeq) uncharacterized protein LOC110516860
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
110516860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110516860
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110516860
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110516860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
zf-C3HC4_4
SPRY
zf-RING_UBOX
zf-C3HC4
zf-B_box
zf-C3HC4_3
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_2
ANCHR-like_BBOX
zf-RING_5
DUF948
MRP-S31
ALMT
zf-RING_6
BLOC1_2
5_nucleotid
CCDC22_CC
IBR_1
Motif
Other DBs
NCBI-GeneID:
110516860
NCBI-ProteinID:
XP_036838300
LinkDB
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Position
7:complement(8300732..8319408)
Genome browser
AA seq
873 aa
AA seq
DB search
MSGNLWTEEQFNCPVCLDLPNEPVTIPCGHSYCMGCIKDYWSKDNPRSPGVYSCPQCRQT
FCPKPSLSRNTMLAEAVEQLRKGALTTSARESIRSAHRANTMGRAKGSSRSGGVSRLPAM
AVPCDMCHGAGDQRAAVKSCLVCMASYCEAHLKPHQTKAELKKHELIAPTGKLAQKICTE
HKYLQEFYCRQCQIFVCWLCTSNQHKDHETTSTKAERTERQKELAEVQTENHQRLKEREG
ELKDMKKMLEATKRSADRVHDDTETVLSELQRSVERLQELVEGVMNQAGQEKVSEAQDVV
NKLEAEISELKRRDKDMKEVFRCEDNIHFLETCESLCSPFECNDLSCVVANPEATFEPVR
EAILNLRERVEDMCNVELGKITKTVNDTTLFTLGDKAKKNGVQKTGGFRSLFSGLGSKTT
TTNNNRPAAPTPTVSVAVRGPNSRGVGLRSQDVRSREEPRADRDRPRREEREPAREAAPR
PSTRSSPTQRRKKPARNSPTQSRRETRRRSPSPTPSRREPASPSPTPSRREPASPSPTPS
RREPASPSPTPSRREPARPSPTPSRRETPRPEPTTTPTPGAVTQATPASGAFSRMGSIAS
LFRSHRRATPAPGPVNNNTGGVDPWGMGALTESQPEVNTSLFLDPPTPDPIMNQMPAFPA
LREIDISSIQAPEPRSREEFLQYACTLTLDTRTAHRRLTLSESNTKATLQGARQPYPDCP
QRFDGWTQVLCQAPLSAQRCYWEVDWRGRGSSMGVAYGALSRKGADARAGFGYNAQSWSL
ELSDTCCTAMHDNEKRDIPVTYSPRLGLFLDLNAGTLAFYSVAESMAHLHTFRANFTQPL
YAAFGVGSGVGVGLDFALGQFSQTSDSIKICPM
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgagtggtaatctgtggacggaggagcagttcaactgtcctgtgtgcctggacctcccc
aatgagccagtcaccatcccgtgtggccacagctactgcatgggctgcatcaaggactac
tggagcaaggacaaccctcgctcccctggagtctacagctgcccccagtgccgccagaca
ttctgtcccaagccctccttgtccaggaacaccatgctggcagaggccgtggagcagctc
cgcaagggggccctcaccacctccgccagggagtccatccggagcgcccaccgtgccaac
accatgggtagagccaagggaagttcccgtagtggtggtgtcagcaggctgccagccatg
gccgtgccctgtgacatgtgccacggcgctggagaccagcgggctgcggtgaagtcttgc
ctggtgtgtatggcgtcctactgcgaggcccacctgaaaccgcatcagacgaaagcggag
ttgaaaaagcatgagctgattgcgcccacgggcaagctggcgcagaagatctgtaccgag
cacaagtacctgcaggagttctactgtcgccagtgccagatttttgtgtgctggctgtgc
accagtaaccagcacaaggaccatgagaccacctccaccaaggcagagcgcacagagaga
cagaaagagctggctgaggtgcagacagagaatcatcagagactgaaagaaagagaagga
gagctgaaagacatgaagaagatgctggaggcaacaaagcgctcagcagacagggtacat
gatgacacagagacggtgctgtcggagctccagcgctcagtggagaggctccaggagctg
gtggagggtgtgatgaaccaggctgggcaggagaaagtaagcgaggcccaggacgtggtg
aacaagctggaggccgagatctcggagctgaagaggagagacaaggacatgaaggaggtg
ttccgctgtgaggacaacatccacttcctggagacctgtgagtctctgtgcagcccgttt
gagtgtaatgatctgtcgtgtgtggtggccaatccagaggctacgtttgagcctgtacgt
gaagccatcctgaacctacgggagagagtggaggacatgtgcaacgtggaactgggcaag
atcaccaagacagtgaatgacacaacactgttcaccttaggagacaaagcaaaaaaaaat
ggcgtccagaagacgggagggttcaggagtttgttttctggtctgggatccaaaacaaca
acaacaaacaacaaccgtcctgcagctcccacaccgactgtctccgtggcggttcgagga
cctaactcacgtggtgtaggcctgcgctctcaggatgttaggagcagagaggaaccacga
gctgacagagacaggccgaggagagaggagagagaaccagccagagaggcagcccccagg
ccaagcaccagatctagtcccactcagaggcggaaaaagccagccagaaatagccctacc
caaagtcgaagagagacgcgcagacgcagtcccagtcccactccaagtcgtagagagcca
gccagtcccagtcccactccaagtcgtagagagccagccagtcccagtcccactccaagt
cgtagagagccagccagtcccagtcccactccaagtcgtagagagccagccagacccagc
cctacgcccagccggagagagacacccagaccagaacccaccaccacccctacccccggt
gctgttacccaagccaccccagcctcaggagctttcagccggatgggatccatagcaagt
ctcttccgctcccatcgacgtgccacaccggcacctgggccagtcaacaacaacactggt
ggagttgacccatgggggatgggtgcactgactgaatcccaaccggaagtgaataccagc
cttttcctggatccgccgacccctgaccccatcatgaatcagatgccagctttccctgca
ttgagggagatagacatctccagcatccaggccccagagcccaggagcagagaggagttc
ctgcagtatgcctgtaccttgaccctagacacgaggacagcccaccggcgtctgaccctg
tcggagagcaacaccaaggccaccctacagggggcacggcaaccctatccagactgcccc
caacgcttcgacggctggacccaggtgctgtgccaggcccctctttccgcccagcgatgt
tattgggaggtggattggcgggggagggggtcatcaatgggtgtggcttatggagccctg
agcaggaagggggcggacgccagggcggggtttggctacaacgcccaatcatggagcctg
gagctgtcggatacgtgttgcacggcaatgcatgacaatgagaagagggacatcccggtg
acgtactcgccgcgtctggggttgttcctggacctcaacgcgggcaccctggcgttctat
agcgtggcggagagcatggcgcacctgcacacgttccgtgccaactttacacagccactg
tatgcggccttcggggtgggaagtggggttggtgttggactggacttcgctctgggtcag
ttcagccagacatccgacagcatcaagatctgccccatgtga
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