KEGG   Oncorhynchus mykiss (rainbow trout): 110516876
Entry
110516876         CDS       T07259                                 
Name
(RefSeq) non-muscle caldesmon isoform X1
  KO
K12327  caldesmon
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04270  Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:omy00001]
 09150 Organismal Systems
  09153 Circulatory system
   04270 Vascular smooth muscle contraction
    110516876
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:omy04812]
    110516876
Cytoskeleton proteins [BR:omy04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Others
     110516876
SSDB
Motif
Pfam: Caldesmon
Other DBs
NCBI-GeneID: 110516876
NCBI-ProteinID: XP_036837487
LinkDB
Position
6:complement(93111509..93199047)
AA seq 621 aa
MSGHLLRRNSSKEGLQNLLRVTAQRSIEDAEEIERERRRRARERQGDQDPHTHTGPASTT
SPTPDNGLPELYPMCESELKASGCQLALEEDEGFSDWTQRLEKRRQRHLEEQESSEDHQP
QQQQNQSQQHEPQQHHPQQQHQPQQHHPQQQQNQPQQHQPQQHHPQQQQQPQMLRLNRAS
PIRPCLKTRPGPGPEEREEKEVEWERRASNKTQDTSRRVTDDKVVEKKKSELKISYTSKV
MRHVNSNGEAAGAEVTSYLVAGKLSPSRSGSLGGQRQEEVDGEVPGGQLETEKAPGQGQG
TLEQLRQRQQEDQEEMEELNRRREEKRRAREEEEHQREKEEQHRQEQEEEERKRVKDGIE
SRRMAASERRMKNLSISSIEGDESFSPFSPMSPTFKNDTEERMTSENTCTINERTESLNR
SLQKSNSIKKTQPPIPISKIDNRLEQYTHAIETSSMEAKAARQQALTDLPSPTEPVASKK
NLFEAGEAWSQPPRETPSKDTEGLNVGVADLIHQWVKGNPDGSCKSLSKPAFSTVFLHLR
YILICPFFKEVKAGDVLSKKNLWENLGESSPSGRAGKGASSGKKYKFVMMAHGKYEKVVV
GDDDYNEHTNGKSTGQCLEEL
NT seq 1866 nt   +upstreamnt  +downstreamnt
atgtctggtcatttactaaggagaaactccagcaaggaaggtctgcagaacctgctcagg
gtgacggcccagcgcagtattgaggatgctgaggagatagagcgggaacggagacgaagg
gccagggagagacagggagaccaggacccacacacccacactggcccagccagcaccacc
agccccacaccggacaatgggctcccggagctatatccaatgtgtgagagtgaactgaag
gctagtggctgccagttggctctggaggaggacgagggcttcagtgactggacccagagg
ttggagaaacgcagacagcgccacctggaggaacaggagtcctcggaggaccatcagccc
cagcagcagcagaatcagtcccagcagcatgaaccccagcagcatcacccccagcagcag
catcaaccccagcagcatcacccccagcagcagcagaatcagccccagcagcatcaaccc
cagcagcatcacccccagcagcagcagcagccccagatgctcaggctaaacagagcctcc
ccaatcagaccctgcttgaagacacgtcctggacctgggcccgaggagagggaggagaag
gaggtagagtgggaacgaagagccagcaacaagacacaagacacttcaagaagagtaaca
gatgacaaggtcgtggagaagaagaaatctgagctgaagatctcctacacctctaaagtc
atgagacacgtcaacagcaacggggaagcagctggggcggaagtgacctcatacctagtt
gcagggaaactgtctccaagtcgtagtggcagcttgggagggcagagacaggaggaggtg
gatggagaggttcccggggggcagctggagacagagaaggcaccaggccagggacagggc
accctggaacagctgagacagagacagcaggaggaccaggaggagatggaggagttgaac
cgcaggagagaggagaaacgcagagccagggaggaggaggagcaccagagagagaaagag
gagcagcacagacaggagcaggaggaggaggagaggaagagggtgaaagacgggatagag
agtaggaggatggcggcttcagagagaaggatgaagaacctcagtatttccagcattgag
ggagacgagtccttcagccccttcagtcccatgagccccaccttcaagaatgacaccgag
gagaggatgacgtctgagaatacctgcacgatcaacgagaggactgagtctctgaaccgc
tctctgcagaaaagtaacagcatcaagaagacccagcctcccatccccatctccaagatc
gacaacaggctggaacagtacactcatgccatagagacgtcctctatggaagccaaggca
gccaggcagcaggctctgacggacctgcccagccccactgagcctgtggcctccaagaag
aatttgtttgaggccggggaagcttggagccagccgcccagggaaacaccttccaaggat
acagagggtctgaatgtaggcgtggccgacctcatccaccaatgggtgaaagggaaccca
gacggaagctgcaaaagcctctccaagccagcattttcaactgtcttcctacatctccgg
tacattctaatctgtcccttcttcaaggaggtgaaggccggtgatgttctgagcaagaag
aacctctgggagaatctgggagaatcttccccgtctgggagagctgggaagggagcttcc
tctggtaaaaagtacaaatttgtgatgatggctcacggcaagtatgagaaggttgtcgtc
ggtgatgatgattacaacgagcacacaaacgggaaatcaactggacaatgccttgaggaa
ctgtga

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