Oncorhynchus mykiss (rainbow trout): 110517067
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Entry
110517067 CDS
T07259
Name
(RefSeq) cingulin-like protein 1
KO
K21110
cingulin-like protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
110517067
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Ortholog
Paralog
GFIT
Motif
Pfam:
Myosin_tail_1
CCDC39
CCDC113_CCDC96_CC
Fez1
DUF1664
CENP-F_leu_zip
OVT1
Filament
Motif
Other DBs
NCBI-GeneID:
110517067
NCBI-ProteinID:
XP_036824689
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All DBs
Position
30:6358867..6398344
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AA seq
1222 aa
AA seq
DB search
MESHRHGVSGSSPDFSRIQQGYNMQQPRPGPRGSPRPHSDSSSMFGVRVQVQGIEGLPYV
VLNGDSRAALPSGGLESYSRHWDHQEVFVNAHSQSEYTFMVNDGRSSFSSPNVEHRPPNH
QREYAHGGALTEVKESQKIPLASAAFMFDFQESQRTVPTSNTVLNFQRHPELLKPYNPDR
NSLSPLPVSTRRLSVPPTQTASVPRPGHLTTPLQSGAEATLIQAAGSRPGAARIPLPAGG
VEWAPTPVSATSQTQCPGPVSAPTQTQCPGPAPTQTQCPGPAPVSAPTQTQCPGPAPVSA
PAPHHSSLATLLSPPNEITNIPRRSPNSVDTEPISSIGSLINQFDSPQQMGRAGPRRGRI
APEDRRRSRSVDSRQQCHSYPLDPSSPASVIRGARGETPGGSTSAPGSPKVRGANRPSTV
MFNRLQWEEKEPSGRSSRAVNVLYGVEETSMTRSRSLNHTEEESERDIQIITPDLLGGQR
GQHEVSIEPQPNEDTAKKILFTYLNDGTTDKTSITEKKVNLVFDRISQLKWKTAENVEEE
IRDYAAKAKEAKELQMTGAELEREVSQLKTQLEHKTMSGRSLAEVCYKAQTDMKTIQEEL
DRRQEELSTLRDRLAQMETELEVAIEELVRVKTERERGRTEMKDLQQQLSEMHDELDQAK
NTTQADGTEKQLLLKDLAQLRLDYQGLIQVQEEQEEVLHWRERELTALKGALNEEVESHD
KELGIMKEVRDKEVQKLREEVEEVKESNTVLGQEKREMEEERGEARGQVNQLMQEREELR
GQVEELESRVEQLNLVIKDSKTLQRQLVKCIEQLKREKRQVEETLEEVREKEEEMSQANK
ALLVRLENVQSEMTQLNHQHREMKERLKEETRRTEELKRTKSDLDEERRLQNSTVEELQK
EMSTIVEGCEVSTEKLQLQVDEVREKSHSALSELQQQLQEKGVELEKSRQTARKLQEELL
PLEQGLERGRREWEEAQQRGRQLERKVEELEGRNAHAHEDHARQVKLMEGEVSHLERDLS
EERNSADLLMDRLDQWKQQMELIRVELLQESAVKQDLECDKITLERQNKDLKSRVSHLEG
SQRSNQDVVVSRLEGRVQELEGRLEGEERDNINLQQANRKLERKVKEMTIQVDDEHISMQ
NQNDQLNQRLKSVKRQMDGAEEEIERLENSKRKLQRDLDERIETNDQVLSQLNTLRSEMR
RKQQKSAPLLMILKGVDDVNTD
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcacagacacggagtgagtggctcttctccagacttcagtagaatacaacag
ggctacaacatgcagcagccgaggcctggtcccagaggcagccctcgacctcacagcgac
agcagcagcatgttcggggttagggtacaagttcagggaattgagggtcttccttacgtt
gtgttgaacggggatagtagagcagctctgccatctggtggcctggagagctacagcagg
cactgggaccaccaggaagtgtttgtcaacgcccacagccagtctgagtacaccttcatg
gtgaatgatgggcgatcttcattcagtagtcccaatgtggagcacagacctcccaaccac
cagagggagtatgctcatggaggtgctctgactgaggttaaggaatcacagaagattccg
ctggcgtccgctgcgttcatgttcgacttccaggagtcacagaggaccgtgccgacatct
aacacggtgttgaacttccagagacacccagagctgctgaaaccctacaacccagacagg
aacagtctcagccccctcccagtttccacccgaagactctctgttccccccactcagaca
gcctctgtacctaggccgggacatctcaccacacctctccagagtggggcagaggccacc
ctgatccaggcagcagggtctagaccaggagcagccaggatccctctgcctgctgggggt
gtagagtgggcccccacccctgtctcggccaccagccaaacccaatgcccaggccctgtc
tcagcccccacccagacccaatgtccaggccctgcccccacccagacccaatgcccaggc
cctgcccctgtctcagcccccacccagacccaatgcccaggccctgcccctgtctcggcc
ccagcgccccaccactcttctttggccaccttactaagccccccaaacgagatcaccaac
atccccagaagatccccaaactcagtggacacagagcccatctcctccataggtagcctg
atcaaccagttcgacagcccccaacagatgggtcgagctgggcctaggagagggaggata
gcccctgaagaccgaaggaggtcacgtagcgtggacagcagacaacagtgtcactcatac
ccattggacccctccagccctgcctcggtcatcagaggggccaggggagagactccaggc
ggatccaccagcgccccagggtcacctaaggtgagaggggccaacagaccctccactgtg
atgtttaatagactacagtgggaggagaaggagcctagcgggaggtcatccagagcggtg
aatgtgctgtacggagtggaggagacctccatgaccagatccaggtctctcaaccacacg
gaggaggagtcagagagagacattcagatcatcactccagatcttctgggaggtcagagg
ggtcagcacgaggtctcaattgaaccacaaccaaatgaagacaccgccaaaaagatactg
ttcacttacctcaatgatgggactactgataaaacctcaatcactgagaagaaggtgaac
ctggtgtttgacagaatcagtcaactgaagtggaagactgcagagaacgtggaggaggag
atcagggactatgctgcgaaggccaaggaggcgaaggagcttcagatgacaggagcagag
ctggagagagaggtgtcacagctgaagacacagctggagcataagaccatgagtggtcgg
agtctggcggaggtgtgttacaaggcccagacagacatgaagactattcaggaggaactg
gacaggagacaggaagaactctctacgctacgggataggctggctcagatggaaacggag
ctcgaggtcgccatagaggagctagtccgggtgaagactgagagagagcggggccgtaca
gagatgaaggaccttcagcagcagctgtctgagatgcacgatgagctggaccaggctaag
aacacaacacaggcagacggcacagagaaacagctccttctaaaggacctggcccagctg
cggttggactaccaggggctcattcaggtgcaggaggagcaggaggaggtgctacactgg
agggagagggagctgactgccctgaagggagccctgaacgaggaggtggagagtcatgac
aaggagctgggcattatgaaggaggtgcgcgacaaggaggtgcagaagctccgagaggaa
gttgaggaggtgaaagagagtaacacagtgctgggccaggagaagagagagatggaggag
gagagaggggaggcacggggacaggtgaatcagctgatgcaggagagggaggaactgagg
ggacaggtggaggaactggagagcagggtggagcagcttaacctcgtcatcaaggactcc
aaaaccctgcagagacagctggtgaaatgcatagagcaactcaagagggagaaacggcag
gttgaggagactctagaggaggtgagggagaaggaagaggagatgtcccaggcaaacaaa
gcccttctcgtacgtctggagaatgtacagagtgagatgacccagctgaaccaccagcac
agggagatgaaggagagactgaaggaggagacgagaagaacggaggagttgaagaggacg
aagagtgatctggacgaggagaggagactgcagaacagcactgtggaggaactgcagaag
gagatgagtactatagtagagggctgtgaggtgtccactgagaagctccagctccaggtt
gatgaagtcagagagaagagccactccgcgctgtctgagctccaacaacagctgcaggaa
aagggagtggagttggagaaatcccgacagactgccagaaaactgcaggaagagctgctt
cccctggagcagggtctggagcggggtcgtagggagtgggaggaggcccagcagagaggc
agacagctggagaggaaggtggaggagctggaggggaggaatgcacacgcccacgaggac
cacgcccgacaggtcaaactcatggagggtgaggtgagccatctggagcgtgatctgagt
gaggagaggaacagtgcagatctcctgatggacagattggaccaatggaaacaacagatg
gagctgataagagttgagctgctgcaggagagtgcagtcaaacaggacctggagtgtgac
aagatcactctggagagacagaataaggatctgaagagcagggtgtctcatctagagggc
tcccagaggtccaaccaggatgttgtggtctccaggctggagggaagggtccaggagctg
gaggggaggctagagggagaggaaagagacaacatcaacctgcaacaagccaacaggaaa
ctagagagaaaagtgaaggagatgacgatacaggtggacgatgagcacatatctatgcag
aaccagaatgaccagttgaaccagaggctgaagagtgtgaagagacagatggatggggct
gaggaggagatagagcgactggaaaactctaagaggaagttacagagagatctggatgaa
cggatagagaccaatgaccaggtcctcagccagctcaacaccctgcgctcagagatgagg
cgtaagcaacagaaatcagcaccgctcctgatgatccttaagggtgtggatgatgtcaac
actgactga
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integrated database retrieval system