Oncorhynchus mykiss (rainbow trout): 110517131
Help
Entry
110517131 CDS
T07259
Name
(RefSeq) ELKS/Rab6-interacting/CAST family member 1 isoform X1
KO
K16072
ELKS/RAB6-interacting/CAST family member 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110517131
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110517131
Membrane trafficking [BR:
omy04131
]
Exocytosis
Others
Others
110517131
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110517131
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cast
Rod_CreS
CCDC39
TMF_DNA_bd
CCDC192
DUF5798
MTUS1_CCDC69_CC2
TolA_bind_tri
Motif
Other DBs
NCBI-GeneID:
110517131
NCBI-ProteinID:
XP_036801226
LinkDB
All DBs
Position
15:73258523..73536948
Genome browser
AA seq
963 aa
AA seq
DB search
MYGSSRSVAKMEGNNGSSQSPGRSPCLPRSPRLGHRRTNSTGGPGGKTLSMENIQSLNAA
YATSGPMYLSDNEVISQQTQAYPNPNHDPSLPKSTMTLGRSGAKLPYGVRTTAMGSNPNI
SQGGGGSSMPSDSIAFGCDQVSSSQSSLQQASTVPHSLRQTRDNTIMDLQTQLKEVLREN
ELLRGEVDVKESKLSSSMNSIKTFWSPELKKERALRKDEVSKISVWKEQYRVVQDETQHL
QMTVQALQDELRTQRDLNQLFQQDCSGGRPGEPLSFEPTEENFHRLQAEHQRQAKELFLL
RKTLEEMELRIDSQKQTLGARDQSIKKLLEMLQSKGLSAKASEEDHERTRRLAEAEMHIH
HLDSLLEQKDKETNALREELHRRSYEGAPESAKTKALQTVIEMKDSKVQSLERGLRDLEE
EIEMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKVEQLKEELSQREVQGEELKQKAAD
LQEEVSAIDQVKQDLSRKETELMGMRTKLETLTNQFSDSKQHIEVLKESLTAKEQRSTII
QTEVDALRLRLEEKDSQLNKKSNQIQETSEEKGTLSREVHDLKDMLEVKERKVNVLQKKI
ENLQEQLRDKEKQMSSLKDRVRSLQTDTSNTDTALTTLEEALAEKERIIERLKEQRDRDD
REKTEDIESNKKELKELREKLSLLQGDLSDRETNLLDLKEHASSLVSSGLKKDSKLKSLE
MSLEQRKDEFIKMENQLKKQSHLLSDHPSNPAQNAMLEAQANTELSERIVTLEQEVTRHR
EDSGKAQVEVDRLLEILREMENEKNDKDKKINELENFASRQVKDQTKTVAHLKHKEQVEK
SKNAQLVQEVRKREDNLNESSQHVKDSLRQKEERIEELEEALRESVQITAEREMVLAQEE
AARTHTEKQMEELLAAMGKVKLELESMQAKLSSTQQSLAEKEAHLTTLRAERRKHLEEVL
EMK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgtacggcagctcccgctccgttgccaagatggagggcaacaacggcagcagtcagagt
cccggtcgctccccctgcctgccccgctccccgcgcctcggccaccgtcgcaccaacagt
acaggaggccccgggggaaagaccctctccatggagaacatccagtctctgaacgcggcc
tatgccacctccggacccatgtacctcagtgacaacgaggtcatctctcaacagacccag
gcctatcccaaccccaaccacgaccctagcctgcccaagagcaccatgaccctgggtcgc
tccggagcaaagctcccttacggcgttcggacaaccgccatgggctccaaccccaacatc
agccagggaggtggaggctcgtccatgcccagtgacagcatcgcgtttgggtgtgaccaa
gtgtcctcgtcccagtccagcctccagcaggcgtccacggtgcctcactccttacgccaa
accagagacaacaccatcatggacctccagacccagctgaaggaggtgctgagggagaac
gagctcctccggggggaggtggatgtgaaggagagcaagctgagctcttccatgaactcc
atcaagaccttctggagccccgagctgaagaaggagagagccctgaggaaggacgaggtg
tccaagatctctgtctggaaggagcagtacagagtggtacaggacgagactcagcacctc
cagatgacggtgcaggccttgcaggatgagctgaggactcagagagatctgaatcagttg
ttccagcaggactgtagtggagggagacctggagaacctctgtcattcgaacccactgag
gagaacttccacaggctccaagctgaacaccagagacaggccaaagagttgttcctcctg
aggaagacgctggaggagatggagttgaggatcgacagtcagaaacagaccctgggggcc
agagaccagtccatcaagaaactactggagatgctgcagagcaaaggtctgtcagccaag
gcctcagaggaagaccatgagaggaccaggagactggctgaggctgagatgcacatccac
cacctagacagtctactggaacagaaagacaaggagaccaacgccctacgagaggagctg
caccgacggagctatgaaggagcccctgaatcagccaagaccaaggccctgcagaccgtc
atcgagatgaaggactctaaggtccagtctctggagcgaggtctgagggacctggaggaa
gagattgagatgttaaagtctaacggggctctgagcactgaggagagagaggaggagatg
aaacaaatggaggtgtacagatcccactccaagttcatgaagaacaaggtagagcagctg
aaggaggagctgtctcagagagaggtccagggggaggagcttaagcagaaggctgccgac
ctgcaggaggaagtgtctgccattgaccaggtaaagcaggacctcagcaggaaggagaca
gagctgatggggatgaggaccaagctggagactctcaccaaccagttctcagacagcaaa
cagcacatcgaggtcctcaaggagtcactgaccgctaaggaacagcgctctactatcatt
cagacagaggtggatgctctgcgtctgcgtctggaagagaaagactcccagctgaataag
aagtcgaaccagatccaggagacgtctgaggagaaggggacgctcagcagagaggtacac
gacctcaaggacatgctggaggtcaaggagcgcaaggtcaacgtcctgcagaagaagatt
gagaatctacaggagcagctgagagacaaggagaaacagatgagtagtctgaaggacaga
gtcaggtctctccagacagacacctccaacactgacacagctctcaccaccctggaggaa
gcactggctgagaaggagcgtatcattgagcgtctgaaggagcagagagacagagacgac
agagagaagacagaagacatcgagtccaacaagaaagaactgaaggagctcagagagaaa
ctcagtctactgcagggagacctgtctgaccgagagaccaacctgttagaccttaaggaa
catgcttcgtccctggtctcctccggtctgaagaaggactctaaactgaagagtctggag
atgtctctggaacagaggaaagacgagttcatcaagatggagaaccaactcaagaagcag
tctcatctcttgtcagaccatccctccaatcctgcccagaatgccatgctggaggcccag
gccaacacggagctgtcagaacgcatcgttactctggaacaggaagtgactcggcacaga
gaggattctgggaaggcccaggtggaggtggaccgattgctggagatcctcagagagatg
gagaatgagaaaaacgacaaggacaagaaaatcaatgaactggagaattttgcttcaaga
caggtgaaggaccagactaagacggtggcccacctgaaacataaggagcaggtggagaag
agtaagaacgcccagctggtgcaggaggtcaggaagagagaggacaacctcaatgagagc
tctcaacacgtcaaggactccctgcgccagaaggaggagcgaatagaggagctggaggag
gctctgagagagagtgtccagatcacagcagagagagagatggttctggctcaggaggaa
gctgctcgcacacacactgagaaacagatggaggagctgcttgcggccatggggaaggtg
aaactggagctggagtccatgcaggccaagctgtcctctacccagcagtcattggctgag
aaggaggcccacctgaccacactgagggcagaacgcaggaaacacctggaggaggtgctg
gagatgaagtaa
DBGET
integrated database retrieval system
