Oncorhynchus mykiss (rainbow trout): 110517154
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Entry
110517154 CDS
T07259
Name
(RefSeq) RNA exonuclease 5-like isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
110517154
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
omy03009
]
110517154
Ribosome biogenesis [BR:
omy03009
]
Eukaryotic type
Pre-60S particles
RNases
110517154
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RNase_T
Phosphodiest
Motif
Other DBs
NCBI-GeneID:
110517154
NCBI-ProteinID:
XP_036798072
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Position
13:complement(3533508..3554061)
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AA seq
889 aa
AA seq
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MEPQVCLKRKREPSPTPESSKTVKETGGNRVPESEHRSGSRPPRLSLPFDRLQEPVTLKD
LTELLQFAALGNTGGLKQPSWCRLHHQKNVSGVSVILLEGLSQAHFYRHYLHFKHLRTKY
TSRHSYTPSPGNMISEIFSSEVVNNSPADALGDQKSAQPEGGLQWHPVIRKFGLETRGLT
GYLLTQEEMIKKHFPVRGMPGSEGFVCTDSDDCVTDSSPLYGLDCEMCLTECGNELTRIS
LVDSRGSCVLDELVKPPNRILHYLTQFSGITRAMLQPITTTLREVQSKLKKVLPRDAVLV
GHSLENDLVALNLIHPHVIDTSLLYRREFGRRFKLKVLAETVLKKQIQTEERKGHDPTED
AQAALELAQYFIHTGPRQVVELYCEELWGGSPTMYQPPVNRATSTHNNNNSSLRFAEALK
SSGQSAVFIGKRADNTLDLANQQWHSSDREVLSSFKRGLDSHSFSVVQLSSFSDHLKAMI
STDQHYHTMSQRLREMCVVFAGPLPSDYTERAVRRLFSSCGTVRAVRLLNTTQRVHAEVE
FELLEGAVLAVEMLNGTLLHSGHIVKVQRPVKESMLDLDVFLSSLQDDPLNANVIYAAGL
KANAKTAQFAAKVNGTGLNANAAAEVNETGLNANIAALPAKVNRARLHAKANHSGLLEKV
NGTFLNAKAKLAEANGPGLHAKAKFAKLAELSVEVNGTLLQVKTMLAEIAAEANVGARLH
AKTAGLCEEDLREAFGQYGTVQGVILPAKHSGKQKRRRHAFLKYDSPDTVDAVLSSPVEL
WDRKVSTRRALTPPHLCSWVTMTTTTGSDRETLDESSQETGREEQEVACVMRKLDRRVGK
LFRSLPDNTLSIVLLPGHNSSHGDGLCFLEVKQGSAALSDHAPDLMLPA
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggagccacaagtctgtctcaagagaaagagggaaccttccccaacaccagagagcagt
aaaacagtgaaagagacaggtggtaacagagttccagagtctgagcaccgttccggttcc
cgacccccgcggctctctctgccgtttgaccgtctccaggaaccggtcacgttgaaagat
ctgacggaactgcttcagtttgctgctctggggaacaccggggggctgaaacaacccagt
tggtgtcgcctccaccaccagaagaatgtgtcaggggtgagcgtgatccttctagaagga
ctgagccaggctcacttctacagacactacctgcactttaaacacctccgcaccaagtac
acctctagacacagttatactccatcgcctggcaacatgatttctgagatatttagcagt
gaagttgtcaacaacagtcctgccgatgcgctaggagaccagaagagcgctcagccagag
ggaggtctgcagtggcacccagtgatcaggaagtttggtctggagaccagagggctgact
ggatacctcctcacccaggaggagatgatcaagaaacacttccctgtccgcggtatgcct
ggcagtgagggctttgtgtgtacagacagtgacgactgtgtgactgacagtagtcctctc
tatgggctggactgtgagatgtgtctgacagaatgtggcaacgagctgacacgcatctct
ctagtagacagcagagggagctgtgttctggacgagctggtcaaacctcccaaccgcatc
ctacactaccttacacagttctctggtatcacccgtgcaatgctgcagccaatcaccacc
accctgagagaagtccaatcaaagctcaagaaagtgttgccccgggacgcggtcctggtt
ggccactcccttgagaacgacctcgtggccctgaacctgatccacccccatgtgattgac
acctccctgctgtacaggagagagtttggacggaggtttaaactcaaggtgctggctgag
actgtgctcaagaagcagatccagacggaggagaggaaaggtcatgaccccacagaggac
gcccaggctgccctggaactggcccagtacttcatacacactggaccacgacaggtagta
gagctgtattgtgaagagctgtggggtgggagtcctaccatgtaccagcctcctgtcaac
agagcaacatctacacacaacaacaacaacagctctctcaggttcgccgaggccctgaag
agttctggccaatcagccgtgtttatagggaagcgtgctgacaacaccctggatctggcc
aatcagcagtggcacagctcagacagagaggtcttgtcttcctttaaaagaggactagac
tctcactcgttcagcgttgtccagttgtcttccttctctgaccatctgaaggctatgatc
tctactgaccagcactaccacacgatgtctcagcgtctgagagagatgtgtgtggtgttt
gcagggccgttgcctagcgactacacagagagggctgtgaggaggctgttcagcagctgt
ggaaccgtacgagctgtcaggctgttgaacactactcagagggtgcatgcagaggtagag
tttgagctgctggagggagctgtgctggctgtcgagatgctcaacggaacactgctacac
agcggacacatcgtcaaggtccagagacctgtaaaggagtccatgttggatctggacgtc
tttctgagttccctgcaggatgacccgctaaatgctaacgtcatctacgccgcagggcta
aaggctaatgctaaaacagcacagtttgcagccaaagtcaatgggactgggctaaatgct
aatgcagcagctgaagtcaatgagactgggctaaatgctaacatagcagcactcccagct
aaggtcaatagagctaggctacatgctaaagcgaaccattcggggctcttagagaaagtc
aatggaacttttctaaatgctaaagctaagctagctgaagcgaatggacctgggctacat
gctaaagctaaatttgctaagctagcagagctctcagttgaagtcaatggcactctgctc
caagtgaaaactatgctagcagagatagcagccgaagccaatgttggagcgaggctccat
gctaagactgccggactctgtgaagaggacctccgcgaggccttcggacagtacggaacg
gttcagggcgtaattctacctgcaaagcactctggaaaacagaaacgtaggagacatgct
ttcttaaagtatgatagtcctgacactgtggacgcggtcctcagctcacctgtggaactc
tgggacaggaaggtgagcactcgcagagccctaactccgccccacctgtgctcctgggtt
actatgacgacgacgactgggtccgacagagaaacactggacgagtcgtcgcaggaaacc
ggaagagaggaacaggaagtggcgtgcgtgatgaggaagttggaccggcgcgtggggaag
ctgttcagatctctacctgacaacaccctcagcatcgtactgctgcctggtcacaacagt
tcccatggcgatggtctgtgtttcctggaggtcaaacaggggtcagcagcactcagtgac
cacgcccccgacctgatgctacctgcatag
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