KEGG   Oncorhynchus mykiss (rainbow trout): 110517253
Entry
110517253         CDS       T07259                                 
Name
(RefSeq) exportin-1 isoform X1
  KO
K14290  exportin-1
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy03008  Ribosome biogenesis in eukaryotes
omy03013  Nucleocytoplasmic transport
omy03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:omy00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    110517253
   03008 Ribosome biogenesis in eukaryotes
    110517253
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    110517253
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110517253
   03009 Ribosome biogenesis [BR:omy03009]
    110517253
   03016 Transfer RNA biogenesis [BR:omy03016]
    110517253
   03036 Chromosome and associated proteins [BR:omy03036]
    110517253
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Ran-mediated transport factors
     110517253
Ribosome biogenesis [BR:omy03009]
 Eukaryotic type
  Pre-40S particles
   Export and cytoplasmic maturation factors
    110517253
  Pre-60S particles
    110517253
Transfer RNA biogenesis [BR:omy03016]
 Eukaryotic type
  tRNA transport factors
   tRNA export factors
    110517253
Chromosome and associated proteins [BR:omy03036]
 Eukaryotic type
  Centrosome formation proteins
   Centrosome duplication proteins
    Regulators of centriole replication
     110517253
SSDB
Motif
Pfam: CRM1_C Xpo1 CRM1_repeat_2 CRM1_repeat_3 CRM1_repeat IBN_N TPR_TNPO3_IPO13_2nd BspA_v Hydrolase_3 Rap1a
Other DBs
NCBI-GeneID: 110517253
NCBI-ProteinID: XP_036843961
LinkDB
Position
1:87953865..88022972
AA seq 1074 aa
MSSMPAVMTVLADHAAQQLLDFSQKLDINLLDNVVNCLYHGVGTQQRLAQEVLTQLKEHP
DAWTRVDTILEFSQSMNTKYYALQILETVIKTRWKILPRNQCEGIKKYVVGLIIKTSSDA
TMVEKEKVYIGKLNMILVQILKQEWPKHWPTFISDIVGASRTSESLCQNNMIILKLLSEE
VFDFSSGQMTQVKAKHLKDSMCNEFSQIFQLCQFVMENSQNAPLVHATLETLLRFLNWIP
LGYIFETKLISTLVYKFLNVPMFRNVTLKCLTEIAGVSVSQYEEQFVNLFTLTMCQLKQM
LPLNTNIRLAYSNGKDDEQNFIQNLSLFLCTFLKEHGQLIEKRPNLRETLMEALHYMLLV
SEVEETEIFKICLEYWNHLAAELYRESPFSTSTSPLLSGSQHFDVPPRRQLYLPVLSKVR
LLMVSRMAKPEEVLVVENDQGEVVREFMKDTDSINLYKNMRETLVYLTHLDYADTERIMT
EKLHNQVNGTEWSWKNLNTLCWAIGSISGAMHEEDEKRFLVTVIKDLLGLCEQKRGKDNK
AIIASNIMYIVGQYPRFLRAHWKFLKTVVNKLFEFMHETHDGVQDMACDTFIKIAQKCRR
HFVQVQVGEVMPFIDEILNNINTIICDLQPQQVHTFYEAVGYMIGAQTDQAVQEHIIEKY
MLLPNQVWDSIIQQATKNVDILKDPETVKQLGSILKTNVRACKAVGHPFVIQLGRIYLDM
LNVYKCLSENISAAIQTNGEMVTKQPLIRSMRTVKRETLKLISGWVSRSSDPQMVGENFV
PPLLDAVLIDYQRNVPAAREPEVLSTMATIVNKLGGHITGEIPQIFDAVFECTLNMINKD
FEEYPEHRTHFFYLLQAVNSHCFPAFLAIPPAQFKLVLDSIIWAFKHTMRNVADTGLQIL
YTLLQNVTQEEAAAQSFYQTYFCDILQHIFSVVTDTSHTAGLTMHASILTYMFNLVEEGK
INTQLNPSNPGNNQVFIQEYVANLLKTAFPHLQDAQVKVFVTGLFSLNQDIAAFKEHLRD
FLVQIKEFAGEDTTDLFLEEREASLRQAQEEKHKLQMSVPGILNPHEIPEEMCD
NT seq 3225 nt   +upstreamnt  +downstreamnt
atgagctccatgccagcagttatgacagtgttagcagaccatgcagcgcagcagctgcta
gacttcagccagaaactagacatcaacctgttggacaacgtggtcaactgtctgtaccac
ggggtcggaacacagcaaaggctggctcaggaggttctgacccagctgaaagagcacccg
gatgcttggaccagagtggacaccatactggagttctcccagagcatgaacaccaaatac
tatgctctgcagattctggaaacagttatcaaaacaagatggaagattctacccagaaac
cagtgtgaaggtattaaaaagtatgttgttggactaattatcaagacgtcgtcggacgct
acaatggtcgagaaagagaaagtgtacattggaaagctgaacatgatccttgttcagatc
ctgaagcaggagtggcccaagcactggcccacgttcatcagtgacatcgtgggagccagc
cgcaccagcgagagcctctgtcagaacaacatgatcatcctcaagctgctcagtgaggag
gtgtttgacttctctagtggacagatgacccaggtcaaggccaagcatctcaaagacagc
atgtgcaatgaattctcccagatattccagctctgccagtttgtcatggagaattcccag
aatgcaccactggtccacgccactctagaaacgctgctgaggtttctcaattggattcct
ctggggtacattttcgagaccaaactcatcagcacactcgtctacaagttcctgaacgtg
ccgatgttccgcaacgtgacgttgaagtgtctgacggagatcgccggcgtcagtgtcagc
caatacgaggagcagtttgtcaacctcttcacgctcaccatgtgtcaactcaaacagatg
cttcccctgaacaccaacatccgcctggcgtattccaacggtaaggatgacgagcagaac
ttcatccagaacctcagcctgttcctctgcaccttcctgaaggagcacggtcagctcatc
gagaagaggcccaacctccgagagacactgatggaggctctccactacatgttgctggtg
tctgaggtggaggagacagagatctttaagatctgtctggagtactggaaccacctggct
gcagagctttacagggagagtcccttctccacctccacctcccccctgctgtctggatca
caacactttgatgtccctcctcgcagacagctctacctgcctgtactctccaaggtgcgt
ctgctgatggtgagccgcatggccaagccggaggaggtgctggtggtggagaacgaccag
ggagaggtggtacgagagttcatgaaggacacagactccatcaacctctacaagaacatg
agagagacactggtgtacctgacccatctggactatgcagacacggagcgtataatgaca
gagaagcttcataaccaggtgaacggtacagagtggtcctggaagaacctcaacacactg
tgctgggctatagggtccatcagtggagccatgcacgaagaggacgagaagaggttcctg
gtcaccgtcatcaaggatctgctgggtctatgtgaacagaagaggggaaaggacaataag
gccatcattgcctccaatatcatgtacatcgtgggccagtaccctcgcttcctcagagcc
cactggaagttcctcaagaccgtcgtcaataaactctttgagttcatgcacgagacccat
gatggggtacaggatatggcgtgtgacactttcatcaagatcgcccagaagtgccgtcgc
cattttgtccaggtgcaggtgggcgaggtgatgcccttcatcgacgagatcctcaacaac
atcaacaccatcatctgtgacctgcagccacagcaggtccacacgttctacgaggccgtg
gggtacatgatcggagcccagacagaccaggcagtacaagagcatatcatagagaaatac
atgttactgcctaaccaggtgtgggacagcatcattcaacaggccaccaagaacgtggac
attctgaaggacccagagacggtgaagcagctcggcagcatcctgaagaccaacgtccgg
gcctgtaaggccgtgggacatcccttcgttatccagttaggacgcatttatctggacatg
ctcaacgtctacaagtgcctcagcgaaaacatctccgcagccatccagaccaacggagag
atggtgacgaaacagcccctgatcagaagtatgaggacggtgaaaagagagacgctcaaa
ctcatctccggctgggttagcagatccagcgatccacagatggtgggggagaactttgtt
ccgccactgctcgacgccgttctcatcgactaccagcgcaacgtccccgccgcccgggag
cccgaggtcctcagcaccatggcaaccatcgtcaacaagctgggcggacacatcaccgga
gagatcccgcagatcttcgatgccgtgttcgaatgcacgctcaacatgatcaataaagac
tttgaggagtacccggaacacaggactcatttcttctacctgctgcaggcggtcaactcc
cattgtttcccagcattcctggccatccctccggcccagttcaaactggtgctggactcc
atcatctgggccttcaaacacaccatgaggaacgtggccgacacaggtcttcagatcctc
tacactctactgcagaacgtgacccaggaagaggctgcagcacagagcttctaccagaca
tacttctgtgacatcctccaacacatcttctctgtggtcactgacacatcacacactgct
ggcctgacgatgcatgcctccatcctgacctacatgtttaacctggtggaggaagggaag
atcaacacccagctcaacccctccaaccccggcaacaaccaggtcttcatacaggagtac
gtggccaacctgctcaaaactgctttcccacatctacaggatgcccaggtcaaggtgttc
gtaacaggactgttcagtctaaaccaggacattgcagccttcaaggaacacctgagggac
ttcctggtacagattaaggagtttgcaggggaggacaccacagacctgttcctagaggag
cgggaggcgtcgctgcgtcaggcgcaggaggagaaacacaagctgcagatgtcagttccc
ggtatcctcaacccacacgaaatacccgaggagatgtgtgattga

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