Oncorhynchus mykiss (rainbow trout): 110517300
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Entry
110517300 CDS
T07259
Name
(RefSeq) cohesin subunit SA-1
KO
K06671
cohesin complex subunit SA-1/2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110517300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110517300
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
110517300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_SCC3-SA
STAG
SCD
Cnd1
Cnd3
Motif
Other DBs
NCBI-GeneID:
110517300
NCBI-ProteinID:
XP_036808010
LinkDB
All DBs
Position
18:18176721..18224140
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AA seq
1262 aa
AA seq
DB search
MITSELPVLQDSSNESGAADTVSLSVSVSELEDPTDTKGKKKRGRPGRPPAANKKPRKSP
AEKATGGAKGRKANGVPQTNGEGGDPVTLFEVVRMGKSAMQSVVDDWIESYKQDRDIALL
DLINFFIQCSGCKGTVRIEMFRNMQNAEIIRKMTEEFDEDSGDYPLTMPGPLWKKFRYNF
CEFICVLIRQCQYSIIYDEYLMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVAL
NLSIHQDNTQRQYEAERNKMAGKRANEKLELLLQKRKELQENQDEIENMMNSIFKGIFVH
RYRDAIAEIRAICIEEIGVWMKMYSDAFLNDSYLKYVGWTLHDRQGEVRLKCLKALQNLY
TNRELFPKLELFTNRFKDRIVSMTLDKEYDVAVEAIRLITLILQGSEDALSNEDCENVYH
LVYSAHRPVAVAAGEFLHRKLFSRHDPQAEEELAKRRGRSSPNGNLLRMLVLFFLESELH
EHAAYLVDSLWESSQELLKDWECMTELLLEEPVQGEEVLSDRQESSLIELMVCTIRQAAE
AHPPVGRGTGKRVLTAKERKTQIDDKNKLTEHFIMALPMLLSKYQADSEKVANLLQIPMF
FDLDVYSAGRMEKHLDALLKQIRLVVEKHIETDVLEACSKTYSILCSEEYTIMNRVDIAR
SQLIDEITDRFTHSVEDLLQEAEEADDDDIYNVLSTLKRLTAFHNAHDLTRWDLFGSCYR
LLKAGIEQGAMPEQIAVQALQCSHYSILWQLVKITEGTPSKEDLVALRRVVKSFLAVCQQ
CLSNVNTPVKEQAFMLLCDLLMVFSHQLVSGGREGLEALVFNPDSTLQNELLTFILDHVF
IDQDDENQSMEGDEEDEANKIEALHKRRNLLAAFSKLIIYDIVDMPAAADIFKHYMKYYN
DYGDIIKETLSKTRQSDKILCAKTLILSLQQLFNELLQDQGPTLDRTSSHVSGIKELARR
FALTFGLDQIKTREAVATLHKDGIEFAFKYQNPHGAEFPPPNLAFLEVLSEFSSKLLRQD
KKTVHSYLEKFMSESMSERREDVWLPLISYRNSLLTGGEDGDRMSVTSGASSKTSSIRSK
KGRTPIHKSKRIEEESSVEASWLRGNDNLQTPGALTTPQLTSTVLRENPRQAADTHLPDH
DSEPGSENDYVHNPQMQMSWLGQQKMEDSRKDRTAMNYMKARNQTVRQTVRGLMEDDAEP
IFEDVMMSSRGQLEDMNEEFEDTMVIDLPPSRNRRERAELRPDFFDSAAMIEDESGFTMP
MF
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatcacctctgagctgcctgtcctacaggactcgtccaatgagagcggagcggcagac
acagtgagtctgagtgtgagtgtgagtgagctggaggacccgacagacactaaaggcaag
aagaagagagggaggcctggcagaccaccagcagccaataagaagcctcggaagtcccca
gcggagaaggctacaggcggggctaaagggaggaaggccaatggggtccctcagaccaac
ggcgagggaggagaccccgtcactctgtttgaggtggtcagaatgggaaagagtgccatg
cagtctgtggttgatgactggatcgagtcgtacaagcaggacagagacatcgccttactg
gacctcatcaacttctttatccagtgttctggctgcaaaggcaccgtgcgcatcgagatg
ttccggaacatgcagaacgctgagatcatcaggaagatgacagaggagtttgacgaggac
agtggggactaccctctcaccatgcccgggccgctgtggaagaagttccgctacaacttc
tgtgagttcatctgcgtattgatacgtcagtgccagtacagcatcatctacgatgagtac
ctcatggacacggtcatatccctcctcacgggactatctgactcacaggtcagagctttc
agacacaccagcacactggcagcgatgaagttgatgacagcgttggtgaacgtggcgttg
aacctcagtatccaccaggacaacacccagagacagtatgaggctgagaggaacaagatg
gccggaaaacgagccaatgagaagctagagctgctgctgcagaagaggaaggagctccag
gagaaccaggatgagattgagaacatgatgaactctatcttcaaaggcatctttgtccac
cgctacagggatgctatagctgagatcagagctatctgtattgaggagattggagtttgg
atgaagatgtactctgacgccttcctcaacgacagctacctgaaatatgtaggatggacc
ttacacgaccggcaaggtgaggtccgtctgaagtgtctgaaggctctccagaacctgtac
accaacagagaactgtttcctaaactggagctgttcaccaaccgcttcaaggaccgcatc
gtgtccatgactctggataaggagtatgacgtggctgtggaggctattagactgatcact
ctcatcctgcagggcagcgaggatgcgttgtccaatgaggactgcgagaatgtctaccac
ctggtttactccgcccacagacctgtcgccgtggcagcaggagagtttctgcacaggaag
ttgttcagcagacatgacccccaggcagaggaggagttggctaagaggagagggaggagc
agccccaacgggaacctcctccgcatgctggtgcttttcttcttggagagtgagcttcat
gaacatgcagcctatctggtggactctctgtgggagagttctcaggagctgctgaaggac
tgggagtgtatgactgagttactgctggaggagcctgtacaaggagaggaggtgctgtca
gacagacaggagagttccctgatagagttgatggtgtgtaccatccggcaggcagcagag
gctcacccacccgtcggcaggggcactgggaagcgtgttctcacggcgaaggagaggaag
actcagatagacgacaagaacaaactgacagaacacttcatcatggccctgcccatgctc
ctgtctaagtaccaggctgactctgagaaggtggctaacctgctacagatccctatgttc
tttgatctggacgtgtacagcgctgggcgtatggagaagcacctagatgccttactgaag
cagatccgcctggtggtggagaaacacattgagacagatgttctggaggcctgcagtaag
acctacagcatcctgtgttctgaggagtacaccatcatgaacagagtggacatcgcccgc
tcgcaactcatcgacgagataacggaccgcttcacacactccgtagaagacctgctgcaa
gaggccgaggaggccgacgatgacgacatctacaacgttctgtctaccctcaagagactc
acggccttccacaatgctcatgacctgacgcggtgggacctgtttggtagctgctacagg
ttgttgaaggctggtattgagcagggggccatgccagagcagatcgctgtccaggccctg
cagtgttcccactactccatactgtggcagctggtgaaaatcacagagggaactcctagt
aaggaggacctggtggctctgaggagagtggtgaagtccttcctggctgtctgtcagcag
tgtctgtccaatgtcaacacacctgtcaaagaacaggccttcatgttgttgtgtgacctg
ctgatggtcttcagtcaccagttggtgtctgggggcagagaaggactggaggccctggtg
ttcaacccagacagcaccttacagaacgagctgctcaccttcatcctggaccacgtcttt
atagaccaggacgatgagaaccagagcatggaaggcgacgaggaggatgaagccaataag
atagaagcccttcacaagaggagaaacctgctcgcagccttcagcaaactcatcatctat
gacatcgtggacatgcctgctgctgcagacatcttcaaacactacatgaagtattataat
gactatggtgatatcatcaaggagactctcagtaagaccagacagagtgataagatcctc
tgtgccaaaaccctcatcctcagtctgcaacagctgttcaacgagcttctccaggaccag
ggtcctactctggacagaacatcgtctcacgtcagcggcatcaaggagttggcccggcgc
ttcgccctcaccttcggcctggaccagatcaaaaccagagaggctgtcgctacgctgcac
aaggatggtatagagtttgcctttaagtaccagaacccccatggtgcagagttccctcct
cctaacctggccttcctagaggtcctctcagagttctcctccaaactgctgcgacaggac
aagaagactgttcactcgtatctggagaagtttatgtcggagtcgatgtcggagcgtcgt
gaggacgtgtggctgcccttaatctcctaccggaacagtctgctaacaggaggagaggat
ggggaccggatgtcggtaacgtcaggcgccagcagcaagaccagctccatccgcagcaag
aagggacggacgccaatacacaagagtaaacgcatcgaggaggagagtagtgtggaggcc
tcctggcttcgtggtaatgacaacctccagacaccgggggcgctaaccacccctcagctc
acctccaccgtcctcagagaaaacccacggcaggcggcggacacacacctacctgaccac
gactctgaacctggctcagagaacgactatgtacacaatccccagatgcagatgtcttgg
ctaggccaacagaagatggaggacagcaggaaggatagaacagccatgaactacatgaag
gcccgcaaccagactgtcagacaaactgttcgtggtctgatggaggatgacgcagagcca
atctttgaggacgtcatgatgtcatcgcgaggtcaactggaggacatgaacgaggagttc
gaagacaccatggtcatcgacctgcctccctccaggaacagacgtgagagggcggagctc
agaccagacttcttcgactcagcagccatgatcgaggacgagtcgggtttcaccatgcct
atgttctga
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integrated database retrieval system
