Oncorhynchus mykiss (rainbow trout): 110517345
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Entry
110517345 CDS
T07259
Name
(RefSeq) tetratricopeptide repeat protein 30A isoform X1
KO
K19683
tetratricopeptide repeat protein 30
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
omy03037
]
110517345
Cilium and associated proteins [BR:
omy03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
110517345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_19
TPR_2
TPR_12
TPR_1
ANAPC3
TPR_7
TPR_8
TPR_14
TPR_16
TPR_CcmH_CycH
TPR_6
ARM_TT21_C
TPR_Slam
ARM_TT21_2nd
TPR_11
UVSSA_N
TPR_EMC2
DUF6891
DASH_Dad2
Motif
Other DBs
NCBI-GeneID:
110517345
NCBI-ProteinID:
XP_036795265
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All DBs
Position
12:96542870..96594168
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AA seq
651 aa
AA seq
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MTLTTIKDGEYTATVYKMIKDGRYGEAIHILSNELQKQMKSRAALSLLGYCYYHMQDFTN
AAECYEQLTQLHPEVEEYKLYYAQSLYGACAYPEAMKATFLLDNPTSHTKMIKLQASIKY
GEEEYSGAKTLVEQLPQDDPDYDVDMGCLLYKEGEYEEACKKFMSAMQVLGYQPELSYNI
GLCYYSMKQYGQALKFIGEIIERGIREHPELSVGMTTEGIDVRSVGNTLILHETALIEGF
NLKAAIEYQLKNCDAAQEALTDMPPRSEEELDPVTLHNQALMNMDKKPSEGFEKLAFLLQ
QIPFPPVTFGNLLLLYCKYEYFDLAADVMAENAHLTYKFLTPYLYEFLDAMLTCQTAPEE
AFRKFDEMNAKLTDQLRKLTKQIQEARLARDTEALKKTLQDYDEMVEKYIPVLMAQAKIY
WNRENYQMVEKIFRKSVEFCNEHDTWKLNVAHVLFMQENKYKEAIGFYEPIVKKHYDNIL
NVSAVVLANLCVSYIMTSQNEEAEELMRKIEKEEEQISYDDPDKKVFHLCIVNLVIGTLY
CAKGNYDFGITRVIKSLEPYNKKLGTDTWFYAKRCFLSLLENTAKHMIMIRDSVVQECIQ
FLEHCEVYGKTEPAMIEQPLEEDRMHIGKNTVTYESRLLKALFYEVIGWNQ
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atgacactgacaacgattaaagacggcgaatacaccgccaccgtctacaaaatgatcaaa
gatgggcggtatggagaggctatccacatcctcagcaatgaactgcagaaacagatgaag
tcacgggcagccctgtctctgctaggctactgctactaccacatgcaggacttcaccaac
gcagcagagtgctatgagcagctgactcagctacaccccgaggtggaggagtacaagctg
tattacgcccagtctctgtacggggcctgtgcctaccccgaggccatgaaggctaccttt
ctattggacaaccctaccagccacaccaagatgatcaaactgcaggcatccatcaaatac
ggagaagaggagtactctggagcgaagacactggtagagcagcttccccaggacgaccca
gactatgacgtggacatgggctgtctactctacaaggagggggagtacgaggaggcttgc
aagaagttcatgtctgccatgcaggtgctgggctaccaaccagaactgtcctacaacata
ggtctgtgctactacagtatgaaacagtatggtcaggccctcaagttcatcggagagatc
atcgagagagggatcagggaacatccagagctgagcgttggcatgacgacagagggcatt
gacgtgaggagtgttgggaacaccctgatcctacatgagaccgccctcatagaaggcttc
aacctcaaggctgctatagaataccagctaaaaaactgcgatgcagctcaggaggccttg
actgacatgcctcccagatcagaggaggagctggacccagtgacgctccacaaccaggcc
ctgatgaacatggataagaagccatcggagggttttgagaaactggccttcctcttgcag
cagatccccttccccccggtcaccttcggaaacctgctgttactgtactgcaaatatgag
tattttgatctggctgctgatgtgatggcagagaatgcacacctcacctacaagttcctc
accccgtatctgtatgagtttctggacgccatgttgacctgtcagacagctccagaggag
gccttcaggaagtttgatgagatgaacgccaagttgacagatcaactacgcaagctgacc
aaacagatacaggaagccagactagcccgggataccgaagccttgaagaaaaccctccag
gactacgatgagatggtggagaagtacatcccagttctgatggcccaggctaagatctac
tggaacagggagaactaccagatggttgagaagatcttccgtaaatcggtggagttctgc
aacgaacacgacacctggaagctcaacgtggctcacgttctcttcatgcaggagaacaag
tacaaggaagccatcggcttttacgaacccatcgttaagaaacactacgacaacatcctg
aatgtcagtgctgttgtgctggctaacctgtgtgtctcctatatcatgaccagccagaac
gaagaggctgaagaactgatgaggaagatcgagaaggaggaagagcagatctcctacgac
gaccccgataagaaagtcttccacctctgtatcgtcaacctggtgatagggaccctgtac
tgtgccaaggggaactacgacttcggcatcacccgtgtcatcaagagtctggaaccgtac
aacaagaagctgggaacagacacctggttctatgctaagcgctgtttcctgtctctgctg
gagaacacggccaaacacatgatcatgatcagggactcagttgttcaggagtgtattcag
ttcctggagcactgtgaagtgtacggtaagacagagccagccatgatagaacagccactg
gaggaggacaggatgcacatcggaaagaacaccgtcacctacgagtctcgcctcctcaaa
gctctcttctacgaggtcatcggatggaaccagtga
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