KEGG   Oncorhynchus mykiss (rainbow trout): 110517541
Entry
110517541         CDS       T07259                                 
Name
(RefSeq) ribonuclease ZC3H12A
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:omy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:omy03019]
    110517541
Messenger RNA biogenesis [BR:omy03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     110517541
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6 zf-CCCH_2 zf-CCCH zf-CCCH_4 UBA_N4BP1_C
Other DBs
NCBI-GeneID: 110517541
NCBI-ProteinID: XP_021451220
Ensembl: ENSOMYG00000011243
LinkDB
Position
3:30095176..30122574
AA seq 663 aa
MDQAFPSLQTPATGQFEPNTGELQLRVDFFRKLGYSPMEVRSALLKLGLSTDTNSVLGEL
VRSGASTSTSNSTIPESGDDTTGPTSHTGSSMASSRTHGPKRDRPVPLLEDRRDTDSELK
PIVIDGSNVAMSHGNKQVFSCRGIELAVIYFLDRGHSTVIVFVPSWRKEQPRPDVPITDQ
HILMELEKKKIVVFTPSRRVGGKRVVCYDDRFIVKHAYESDGVIVSNDTYRDLQGERPEW
KRCIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPLLPEHKRQLCPYGKKCTYGV
KCKFYHPERTHQSHSSLADELREKARLSSEKEDRNPMMSHLRGPQADPGSFPSYSLENDL
EHRLTLEHRGSLREGPKSQVTENMLLYWDGPRSSRNQQARSPTAVGQGQMDWPSMLSPST
TTDLPYASISHECLDSGFGSYESQSQYSDVSQGHSKAFRPRQQQGFPSGSRHPGIHPERL
AQDSPQPCRCFHLAPSSGPQQQHHSNPHLESHSQSQLRYDTYSPPLYPPNMHHYSLPCNF
QQDGVGAHHFHPHQHPQKYWSDPFHGGVPQARASCSLPPGPHPTPHGAPHSCSSYRNQQE
HDSWAQPPPPSAFDSEREELRKKLQAIFNPHQVDTVMEMFPHLMDAQKLAAEILNLKSQR
GAF
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggaccaggcctttcccagcctccagaccccagccactggtcaatttgaacccaacaca
ggagagctccagctcagggtggacttcttcagaaagttgggctactcccccatggaggtt
cggtccgccctgcttaagctaggcctgagtacagacaccaactctgtactgggggagctg
gtccgcagtggagccagcactagtacttctaactcaaccatccctgagagtggtgacgat
actactggccccacaagccacacaggctccagcatggcctcctctaggacccatggcccc
aagagagacagaccagtcccattactggaagacaggcgggacacagacagtgaactgaaa
cctatcgttattgacggcagcaatgtggccatgagtcatggtaacaaacaagtgttctcc
tgtaggggaattgagttggcagtgatctatttcctggatagaggtcactcaacggtcatt
gtgtttgtgccctcatggcgcaaggagcagcccaggcctgatgtccccatcacagaccaa
cacattctaatggagctagagaagaagaagatagtcgtcttcactccctcgagacgtgtc
ggtggtaaacgggtggtctgctacgacgaccgttttattgtgaagcatgcctacgagtcg
gacggcgtgatcgtgtccaacgacacctatagggacctgcagggagagcgtccggagtgg
aagcgttgtatcgaggagaggctgcttatgtactctttcgtcaatgacaaattcatgccc
ccagatgacccgcttggtcgtcatggtcccagtctggagaacttccttcggaagaagcct
ctgctgccagaacacaagcgccaactctgtccttatggtaaaaagtgcacctacggcgtg
aagtgtaagttctaccaccctgagcgcactcaccaatcccactcctcgttggctgacgag
ctcagggagaaggcaaggctctcctcggaaaaagaggaccggaatcccatgatgtcacac
ctgaggggcccccaggccgacccgggatcctttccctcctactctctggagaatgacctg
gagcacaggttgacgttagagcaccgcggttccctgagggagggtcccaagagccaggta
actgagaacatgttgctatactgggatgggccacgctccagtaggaaccagcaggcccgc
agccccacagcagtaggccaaggacagatggattggcccagtatgctctccccctccact
actactgacctcccctatgccagcatctcccatgagtgcctggactctggttttggctcc
tatgagagccagagccagtactcggatgtgtcccaaggccacagcaaggccttcaggccc
aggcagcagcagggcttcccctctggttccagacatccaggcatacatccagagaggctg
gcccaggacagcccccagccctgcaggtgtttccatttggctccctcctcaggtccccag
cagcagcaccacagcaacccacacctcgagtcccactcccaatcccagctgaggtatgac
acctactcgcctcctctgtacccacccaacatgcaccactacagcctcccctgcaacttc
cagcaagacggggtgggggcacaccatttccacccccatcagcacccccagaagtactgg
tcagaccccttccatggcggggtcccccaggctagggcatcctgtagcctcccccccggc
ccccaccctaccccgcatggagccccccactcatgctcctcttacaggaatcagcaggaa
cacgactcctgggcccagccacctccaccttctgcctttgactcagagagagaggagctc
cgtaagaaactgcaggccattttcaacccccaccaggtggatacggtcatggagatgttc
cctcacctgatggacgcccagaagctggctgcagagatcctcaacctcaaatctcagaga
ggtgccttctga

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