Oncorhynchus mykiss (rainbow trout): 110517541
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Entry
110517541 CDS
T07259
Name
(RefSeq) ribonuclease ZC3H12A
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110517541
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110517541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_2
zf-CCCH
zf-CCCH_4
UBA_N4BP1_C
Motif
Other DBs
NCBI-GeneID:
110517541
NCBI-ProteinID:
XP_021451220
Ensembl:
ENSOMYG00000011243
LinkDB
All DBs
Position
3:30095176..30122574
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AA seq
663 aa
AA seq
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MDQAFPSLQTPATGQFEPNTGELQLRVDFFRKLGYSPMEVRSALLKLGLSTDTNSVLGEL
VRSGASTSTSNSTIPESGDDTTGPTSHTGSSMASSRTHGPKRDRPVPLLEDRRDTDSELK
PIVIDGSNVAMSHGNKQVFSCRGIELAVIYFLDRGHSTVIVFVPSWRKEQPRPDVPITDQ
HILMELEKKKIVVFTPSRRVGGKRVVCYDDRFIVKHAYESDGVIVSNDTYRDLQGERPEW
KRCIEERLLMYSFVNDKFMPPDDPLGRHGPSLENFLRKKPLLPEHKRQLCPYGKKCTYGV
KCKFYHPERTHQSHSSLADELREKARLSSEKEDRNPMMSHLRGPQADPGSFPSYSLENDL
EHRLTLEHRGSLREGPKSQVTENMLLYWDGPRSSRNQQARSPTAVGQGQMDWPSMLSPST
TTDLPYASISHECLDSGFGSYESQSQYSDVSQGHSKAFRPRQQQGFPSGSRHPGIHPERL
AQDSPQPCRCFHLAPSSGPQQQHHSNPHLESHSQSQLRYDTYSPPLYPPNMHHYSLPCNF
QQDGVGAHHFHPHQHPQKYWSDPFHGGVPQARASCSLPPGPHPTPHGAPHSCSSYRNQQE
HDSWAQPPPPSAFDSEREELRKKLQAIFNPHQVDTVMEMFPHLMDAQKLAAEILNLKSQR
GAF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggaccaggcctttcccagcctccagaccccagccactggtcaatttgaacccaacaca
ggagagctccagctcagggtggacttcttcagaaagttgggctactcccccatggaggtt
cggtccgccctgcttaagctaggcctgagtacagacaccaactctgtactgggggagctg
gtccgcagtggagccagcactagtacttctaactcaaccatccctgagagtggtgacgat
actactggccccacaagccacacaggctccagcatggcctcctctaggacccatggcccc
aagagagacagaccagtcccattactggaagacaggcgggacacagacagtgaactgaaa
cctatcgttattgacggcagcaatgtggccatgagtcatggtaacaaacaagtgttctcc
tgtaggggaattgagttggcagtgatctatttcctggatagaggtcactcaacggtcatt
gtgtttgtgccctcatggcgcaaggagcagcccaggcctgatgtccccatcacagaccaa
cacattctaatggagctagagaagaagaagatagtcgtcttcactccctcgagacgtgtc
ggtggtaaacgggtggtctgctacgacgaccgttttattgtgaagcatgcctacgagtcg
gacggcgtgatcgtgtccaacgacacctatagggacctgcagggagagcgtccggagtgg
aagcgttgtatcgaggagaggctgcttatgtactctttcgtcaatgacaaattcatgccc
ccagatgacccgcttggtcgtcatggtcccagtctggagaacttccttcggaagaagcct
ctgctgccagaacacaagcgccaactctgtccttatggtaaaaagtgcacctacggcgtg
aagtgtaagttctaccaccctgagcgcactcaccaatcccactcctcgttggctgacgag
ctcagggagaaggcaaggctctcctcggaaaaagaggaccggaatcccatgatgtcacac
ctgaggggcccccaggccgacccgggatcctttccctcctactctctggagaatgacctg
gagcacaggttgacgttagagcaccgcggttccctgagggagggtcccaagagccaggta
actgagaacatgttgctatactgggatgggccacgctccagtaggaaccagcaggcccgc
agccccacagcagtaggccaaggacagatggattggcccagtatgctctccccctccact
actactgacctcccctatgccagcatctcccatgagtgcctggactctggttttggctcc
tatgagagccagagccagtactcggatgtgtcccaaggccacagcaaggccttcaggccc
aggcagcagcagggcttcccctctggttccagacatccaggcatacatccagagaggctg
gcccaggacagcccccagccctgcaggtgtttccatttggctccctcctcaggtccccag
cagcagcaccacagcaacccacacctcgagtcccactcccaatcccagctgaggtatgac
acctactcgcctcctctgtacccacccaacatgcaccactacagcctcccctgcaacttc
cagcaagacggggtgggggcacaccatttccacccccatcagcacccccagaagtactgg
tcagaccccttccatggcggggtcccccaggctagggcatcctgtagcctcccccccggc
ccccaccctaccccgcatggagccccccactcatgctcctcttacaggaatcagcaggaa
cacgactcctgggcccagccacctccaccttctgcctttgactcagagagagaggagctc
cgtaagaaactgcaggccattttcaacccccaccaggtggatacggtcatggagatgttc
cctcacctgatggacgcccagaagctggctgcagagatcctcaacctcaaatctcagaga
ggtgccttctga
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