Oncorhynchus mykiss (rainbow trout): 110517734
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Entry
110517734 CDS
T07259
Name
(RefSeq) probable JmjC domain-containing histone demethylation protein 2C isoform X1
KO
K11449
jumonji domain-containing protein 1C [EC:1.14.11.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110517734
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
110517734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_KDM3B
PWWP_KDM3B
DUF7030
JmjC
zf-C5HC2
Motif
Other DBs
NCBI-GeneID:
110517734
NCBI-ProteinID:
XP_036827954
LinkDB
All DBs
Position
Unknown
AA seq
3138 aa
AA seq
DB search
MAMAVETRPELVGKRFLCVGGDEPLDLRDIGRWGWRAGVIRAVTHRDNNHSELTVYVEFD
DLEWEKREWVKVYEDFQVFLLEQQLVWAKRREGTLLVENPQGTKDKHIQWPALTFRPLVG
KATLGSITAVEFFSDRQLDFLSDHGAYQPYQEEVDSLSPVLRDNPQLHEEVRFWLKDQKV
QDIFLQGPYSLNGYRVRVYRQDSATQWFTGIITHHDLFSRNMVVMNDQVLEPQNVDPSMI
QMTFLDDVVHSLLKGENIGIQSRRRSRSNQNNSAHGHYTRAQANSPRPVMNSSGGAVKQG
SGVTTQQGQGQGGSQSQQAPAQHSPCQEQTQHRGPGFSRRKGSDSSVPDDDFKGDNVDCN
ERAGRGGEDDGEDRTRDFFKSTSSKQVAVNKRRKAEEEEEKKSGLKRLRNETTVRSDFSE
SSDSEMSTKRTRTADSSSSSEQNSEEELKGETGQEGHKTQGSKTGKESALTGSLSPWGEE
LQKAEFQQSSADREQRSSLRQPQRQGERSPLQQQQAPPLSSSSQGSAPSEGQGECIMENN
STMKSQTHPQSKDQYTSAEVVSRTQTPSQYIIDITAEDANAHMASRENSEAVSALLASQN
PSEPSYLSEPSRHLVLNPSVAPPSPLRKSPSECDLRNQTPSVSECDLRNQIPLVSECDLR
NQTPLVLECDLRNQTPLVLECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLR
NQTPSVSECDLRNQTPSVSECDLRNQTPSVSECDLRNQTPSVCRKPEVKHDIAGSLGSKM
GLVHSAVIRPIASVSESAAVVEREKQLYSSMLPCIKNASLADEARKSYKLSPSPDVPKPL
PSPEALKPKPLCSPDIVKSKTQSVLETCSKPKPLTSPEVSKHKGRYPDNTPRSSFKPVLA
RGTESPGSCTKSPLIIDKNEHFTVYRDPALVRPNQETNHVSYLHPQLHPLHASCLTPSST
HHLLSGVLSGLPPGPLLGGHPRLDSSGLGHLGLAHHHPVSQPQTHSHTSASYNQLGLYPI
IWQYPNETHSYPPRLNLPGSKWVHPENPVSSETNMRRNTASPWLHHQVPVSSSDSLDQLS
HVPVPIRPASADPHRSDPHPHRSEPHRSDPHRLIKINPHASPPLPPAKTAGDLHREDLKG
FVDPIRTITLAHLKQEQDRSRTPTGKDSHLHQLYLEACNKQQQQRMAQQQQQEAGQRDRA
SKYKEENRRILQESIEVAPFTAKIRSSETDREPNPYPRIPSLPSLPHPYPRIPSLPSLPH
PQRPHQEKETEPPAVDLYQFKQQSQHSLPPSNYFTTLSNSVVNEPPRLYPSKELNSYFDK
VSREQESAAASSLSLGGGAAFSSKSLSKPPPLIKHQADGEGLLGKISEQLNQQVSLSNMQ
RYRLSTIVSPVSPDLSPSSSQSQTRTHCQTQSQTQSQTRTHCQTQSQTRTHCQTQAQLRC
MPALHRAPVFHPPIQQTLDRKEVGYGRLSPPTLTPIQPVSSAIKVSEQQKPPTLLPELRE
VSAVCKGGAAMNSSEVWRAGDSQSHDKLGWHSERSPGRKPGATTASVIVRPSTCIKYDGS
PGAKTSSSAKDSLTGRMFPGGRPQTVCLKLAYERDRESGGKVILPNTNLEEAVCVQQYNN
NFMRVSQSQGTFPVSVSAAANSVCNRSSDVTRAVSNMAPYGGLSRRQERTYCGPNTSSAS
RTESCGPRGRAFHSGPGLEPRAELQQQEGSSSRTSSPNLHPGPSLASSTQASPNPSQSYY
GSFIHLKKHKAALAAAQQSRGPSSSSSGSGPESLIEPSNSKALHISPPPPLASASVQNHR
TTASPGPYQAGASPSPGPLPNGQPAQMNQSQSQPNYHKLKKAWLTRHSEEDRNINTMMKT
EEADKSVTTTVSPSVSKSVTTTVSPSVSKSVTTTVSPSVSKSVTTTVSPSVSKAVTTTVS
PSVSKAVTTTVSPSVSKSVTTTVSPSVSKSVTTTVSPSVSKAVTTTVSPSVSKAVTTTVS
PSVSKAVTTTVSPSVSKAVTTTVSPSVSKVVTTTVSPSVSMSVTTTVSPSVSKAVTTTVS
PSVSKAVTTTVSPSVSKAVSPSVSEMEMIKPCTVTLIASTSSDVEMKIEEVKGQEDKMAA
EDRNTRRGSKRVYDHDSASESGEDSDASESSKQEQRAKRQPKPTYKKKQNDMRRRRGDGE
KDEDELKPNGIFRSAREKTKLKLSSNNGIPRSVLKDWRKVKKLKQTGESFLQDDSCSEIG
PNLQKCRECRVVRSKKGEQPAHSPVFCRFYYFRRLSYSKNGVIRVDGFSTPDQFDEEALS
LWAPDVYEENELDPDSSKYILSYIGDQFCQMVTTENTAATWIKKDAKMAWKRAVRGVREM
CDACEATLFNIHWVCHKCGFVVCLDCYKAKERKTSKDKELYAWLKCVKGQQHGHKYLMPT
QIIPGTVLTEVVSAMHLFREKYSIRSPCVCTGKHNPLLSKLPATNGVSQVLQNVLNHSNK
ISLCNVKTETGQLNPIQGKAETNGGSSPASDTSSDSKLTPPESQSPLHFLADLTEQKSQE
DKKENKESPLGKVGKEEKVSSLESLHCKASSLVSNITEQGSTLRDLLTTTAGKLRLGSTD
AGMAFAPVYSTAAQMGKSGRSMPNILDDIIASVVENKIPASRGAKLSLKLEATTTTTEDR
EVKTERIERKKQPGTGTGPNPGSGTGPNPGSGTGPNPGTGPNPGTGTGPNPGTGPNPGTG
TGSNPGTGTGPNPGTGTGPNPGAGTGPKPGTGTEELPEPKPQLEKALQLHADIPHCWLYD
RRLLWLKDHRHPGNWKLFRECWRQGQPVLVTGLHKPLNAALWKADSFNLEFADHQGDLLN
CKDGLVSNSGINEFWDGFEDLTKRPKSKDGDTVVYRLKDWPSGEEFMALMPSRYDDLMRN
LPLPEYCDPEGNLNLASHLPSFFVRPDLGPRLCCAYGVAASQEQDFGTANLHREVSDIVS
VLVYVGVAKGNGVLSKTGVLKRLEEEDLDDSVKKRLKDSSETPGALWHIYISKDVEKIKD
FLHKQVAKEQGAEISAEHDPIREPGWYLSRKMRQRLWEEHDVQGLTVVQFLGDSVLIPAG
ALHQVPLVQNLHSCVQVINDFVSPEHVFHSFHLTQELRSSREEPNYEDKLQVKNILFHSV
KDALTSLRRYSQEEEENS
NT seq
9417 nt
NT seq
+upstream
nt +downstream
nt
atggccatggcggtggagacgcgaccggagctggttgggaagcggttcctgtgtgtcggt
ggagacgagccgctggatctccgggatatcggccgctggggctggcgagctggggtcatc
cgagccgttactcaccgggacaacaaccattcagagttgacggtgtatgtggagtttgat
gacctggagtgggagaagcgtgagtgggtgaaagtgtatgaggacttccaggtgttcctg
ctggagcagcagctggtatgggccaagaggagagagggcaccctgctggtggagaacccc
cagggtactaaagacaagcacatccagtggccagctctgacgttcagacctctggtgggg
aaggctactctgggttccatcacggctgtagagttcttctctgacagacaactggacttc
ctgtctgaccacggagcataccagccctaccaggaggaagtggatagtttgagtcctgtt
ctcagggacaaccctcagcttcatgaagaggtcaggttctggctcaaagatcaaaaggtt
caggacatttttttgcaaggtccgtattcattaaatggttaccgagttcgtgtttacaga
caagactcggccactcagtggttcacagggatcatcacacatcatgacctcttcagccgt
aatatggttgtgatgaatgaccaggttctagagccccagaatgttgacccctctatgatc
cagatgacctttctggacgatgtggtccactctctgctgaaaggagagaacattggtatc
cagtcccgacgcaggtcccgttccaaccagaacaactctgcccacggtcactacacccgc
gcccaagccaacagccccagaccagtcatgaactcctctggtggggcggtgaagcagggg
tcaggggtcaccacccagcagggtcaaggtcagggcgggtcccagagccagcaggcccca
gcgcagcactccccttgccaggaacagacgcagcaccgcggacctggcttctccaggagg
aagggatctgacagcagtgtccctgatgatgacttcaagggagacaacgtggactgtaac
gagagagcagggagaggaggtgaggatgatggtgaagatagaacaagagacttctttaaa
agtacgagcagcaagcaggtggctgtgaacaagcggaggaaagcggaggaggaagaggag
aagaaatcaggtttgaaaagactgagaaacgagactacagtgaggtctgacttctctgag
agcagtgactctgagatgtctaccaagagaaccaggacggcagactcctcctcttcctca
gagcagaactcagaggaggagctaaaaggagagaccggccaggaggggcacaagacccag
ggttctaagactgggaaggagtctgctctgacaggcagtctctccccctggggtgaggag
cttcagaaggcggagtttcagcagtcatcagccgacagggagcagaggtcatccctgcga
caacctcaacgacagggagaacggtctccactgcaacagcagcaggcccctcccctgtcc
tcctcctcccagggctctgccccctctgagggccaaggggagtgcatcatggagaacaac
agcactatgaaatcccagacccatccccagtccaaggaccagtacaccagcgctgaggtg
gtctccaggacccagactccctctcagtatataatcgacatcacagcagaggacgctaac
gcacacatggcctcccgggagaactctgaggccgtctcggccctgctggcctcccagaat
ccatctgagccctcctacctctctgagcccagcagacatttggtgctgaacccctctgtg
gcccctccctctccccttcggaagagcccctcggagtgtgaccttaggaaccagactccc
tcagtgtcagagtgtgaccttaggaaccagattcccttagtgtcagagtgtgaccttagg
aaccagactcccttagtgttagagtgtgaccttaggaaccagactcccttagtgttagag
tgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaaccagactccc
tcagtgtcagagtgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttagg
aaccagactccctcagtgtcagagtgtgaccttaggaaccagactccctcagtgtcagag
tgtgaccttaggaaccagactccctcagtgtcagagtgtgaccttaggaaccagactccc
tcagtgtgtaggaagccggaggtaaagcatgacatagctggcagcctgggcagtaagatg
gggttagtccattcagcggtgatcagacctatagcatcagtcagtgagtctgctgctgta
gtagagagagagaagcagctatattcctccatgctgccctgcattaagaacgcctcattg
gccgacgaggccaggaagtcgtacaagctaagcccctcccctgatgtccccaagcccctc
ccctccccagaggccctgaagccaaagcccctctgctcccctgacatcgtcaagtctaaa
acacagagtgttctggagacttgttctaaacccaaacccctcacctccccagaggtgtcc
aagcataaaggccgttacccggacaacacccctcgctccagctttaagcccgtcctggcc
cgagggactgagtcgccaggatcttgcactaagagtccgctaatcatcgataagaacgag
catttcaccgtgtaccgggaccctgcgcttgtccgtcccaaccaggagaccaaccacgtg
tcctatctgcacccccagctccaccccctccatgcctcctgcctcaccccctcttccact
caccacctcctctccggggtgctctctggcctgcctccaggccccttgctggggggtcat
ccccgactagactcctcggggctggggcacctgggactagctcatcaccaccctgtctct
cagccccagacacacagccacacctcagcctcatacaaccagctggggctgtatccaatc
atctggcagtaccccaatgagacccactcctatcccccaagactcaacctgcccgggtcc
aagtgggtgcaccctgaaaaccctgtcagttctgagaccaacatgaggaggaacacggcc
agcccttggctacaccaccaggtccctgtctcctcctctgacagcctggaccaactgagc
cacgtcccggtccccatccgaccagccagcgccgaccctcaccggtccgacccccatccc
caccgttcagaaccacaccgctcggacccccaccggctcatcaagatcaacccccacgcc
agcccccctctgccaccggccaagaccgctggagatcttcacagggaggatttgaagggt
tttgtggatcccatcagaaccatcactctggcccacctgaagcaggagcaggaccgcagc
agaaccccgaccgggaaggacagtcacctgcaccagctctacctggaggcctgtaataaa
caacagcagcagaggatggcccagcagcaacaacaggaagcagggcagagggaccgggcc
agtaagtataaggaggagaacagacggatcctccaggagagcattgaggtggcccccttc
accgctaagatccgctccagtgagaccgacagggagcctaacccctacccccggatcccc
tcgctcccctccctgccccacccctacccccggatcccctcgctcccctccctgccccac
ccccagcgcccccaccaggagaaggaaacggagccccctgctgtagacctgtatcagttt
aaacagcagtcccagcacagtctcccccccagtaactacttcactaccctgtccaacagt
gtggtcaacgagccaccgcgtctctacccctctaaagagctcaactcatactttgacaag
gtgagcagggagcaggagtctgcagcagcctctagtctctctctgggaggaggggcagcg
ttcagctccaagtccctgtccaaaccccctcctctcatcaaacaccaggctgatggggag
ggtctgctagggaagatatcagagcagctgaaccagcaggtaagcctatccaacatgcag
aggtatcgtctcagtaccatagtcagccctgttagtccagacctctcgccttcctccagt
cagagccagacccgaacccactgtcagacccagagccagacccagagtcagacccgaacc
cactgtcagacccagagccagacccgaacccactgtcagacccaagcccaactaaggtgt
atgccagcactgcaccgtgcccccgtgttccaccctcctatccagcagacactggacagg
aaggaggtgggctacggccgtttgtctccacccaccctgacccccatccagccagtcagc
tcggccattaaggtgtctgagcaacagaaaccgcccacccttctgcccgagctacgggag
gtcagcgccgtgtgtaagggcggggcagcgatgaactcatccgaggtgtggcgagccggc
gactctcagagccacgacaagctgggatggcattctgagaggagccccggcaggaagcct
ggggccaccacggcgtctgttatcgtccgtccctctacgtgtataaagtacgacggctcg
ccaggcgccaagacctcttcctcggccaaggactctctgacggggaggatgttcccaggc
ggcaggcctcagacagtctgtctgaaactggcctatgagagagacagggagtctggaggg
aaggtgatcctgccaaacactaacttggaggaggctgtttgcgtgcagcagtacaataac
aactttatgagagtgtcccagtctcagggaacctttccagtctccgtctcggctgctgcc
aactctgtgtgcaataggagtagtgatgtgactagggcagtctccaacatggctccctac
ggtgggctgagtagaagacaagagagaacctactgtgggcccaacacctccagcgctagc
aggacagagagctgtggccctcggggcagggccttccactcagggcctgggttagaacca
agggccgagctccagcaacaggaggggagctcctccagaacctcatcccccaacctgcac
cccgggcccagcctggccagcagcacccaggcctctcccaaccccagccagtcctactat
gggagctttatccatctgaagaagcacaaggcagcgttggcagcagcccagcaatccaga
ggtcctagcagcagctccagtggtagtggtcccgagagcctgattgagccatctaacagt
aaagctcttcacatctcccctccacctccccttgcctcggcctcagtccagaaccacaga
accacagcaagcccaggaccatatcaagcaggagctagccccagccctggccccctcccc
aatggccagccagcccagatgaaccagagccagtctcaacccaactaccacaagctgaag
aaggcctggctcaccagacactcagaggaggacaggaacataaacactatgatgaaaaca
gaggaggctgataagtctgttaccaccactgtgagcccctctgtgtccaagtctgttacc
accactgtgagcccctctgtgtccaagtctgttaccaccactgtgagcccctctgtgtcc
aagtctgttaccaccactgtgagcccctctgtgtccaaggctgttaccaccactgtgagc
ccctctgtgtccaaggctgttaccaccactgtgagcccctctgtgtccaagtctgttacc
accactgtgagcccctctgtgtccaagtctgttaccaccactgtgagcccctctgtgtcg
aaggctgttaccaccactgtgagcccctctgtgtcgaaggctgttaccaccactgtgagc
ccctctgtgtcgaaggctgttaccaccactgtgagcccctctgtgtcgaaggctgttacc
accactgtgagcccctctgtgtcgaaggttgttaccaccactgtgagcccctctgtgtcc
atgtctgttaccaccactgtgagcccctctgtgtcaaaggctgttaccaccactgtgagc
ccctctgtgtcgaaggctgttaccaccactgtgagcccctctgtgtcgaaggctgtgagc
ccctctgtgtctgagatggagatgatcaagccttgcaccgtcactctgattgcctctacc
tccagtgatgtggagatgaagatagaagaggtcaaaggtcaggaggacaagatggccgct
gaggacaggaatacgcggcgtgggagcaagagggtgtacgaccacgactcggcctcagag
agcggagaggactctgacgccagcgagagcagcaagcaggagcagagggcgaagaggcag
cccaaacccacctacaagaagaaacagaacgacatgcgcaggaggagaggagacggagag
aaagatgaggatgagctgaaacccaacgggatctttaggagcgccagggagaagaccaag
ctgaaactgtccagcaacaatggtatcccccgctctgtgctgaaggactggaggaaggtg
aagaagctgaagcagacgggggagtcgttcctgcaggatgactcgtgctccgagattgga
cccaacctgcagaagtgtcgggagtgtcgtgttgttcgcagcaagaagggggagcagccg
gctcattcccctgtcttctgccgcttctactacttccgccgcctgtcctacagtaagaat
ggagtgatccgtgtggacggcttctccactccagatcagtttgatgaggaggctctgtcc
ctctgggctcctgatgtatacgaggagaatgagttggacccagactcctccaagtacatc
ctctcatatataggagaccagttctgtcagatggtcaccactgagaacactgctgctaca
tggatcaaaaaagatgccaagatggcctggaagagggctgtgagaggggtccgggagatg
tgtgacgcgtgtgaagccaccttgtttaatattcactgggtctgccacaaatgtggcttc
gtggtttgtctggactgttacaaggcaaaggagaggaagacctccaaagacaaagagctg
tacgcctggctgaagtgtgtcaagggacagcagcatggtcacaagtacttgatgccaaca
cagattatcccaggaactgttctgacagaggtggtgagcgccatgcatctgttcagggag
aagtacagcatcaggtctccctgtgtctgtactgggaaacacaaccctctactcagcaag
ctgcctgctaccaacggagtctctcaggttctccagaacgtgttaaaccacagcaacaag
atctctctatgtaacgtgaagacagagactgggcagctgaaccccatccagggtaaagct
gagactaacggaggctccagccctgcctcggacacctcctctgactccaaactgactccc
ccggagtcccagagtcctctccacttcctggctgacctgactgaacagaagtcacaggaa
gacaagaaagaaaacaaggagtctcctctgggtaaggtgggcaaggaggagaaggtcagt
agcctggagtctctccactgtaaagcgtctagcctggtgtctaacatcacagaacagggc
tctactctaagagacctcctgacgaccaccgctggtaaactacgtctgggctctactgat
gctggcatggccttcgctcctgtatactccaccgcagcacagatggggaagagcggccgt
agcatgcccaacatcctggatgacatcatcgcgtccgtggtggagaacaaaatccctgcc
agccgaggagccaagctgagtctgaagctggaggccaccaccaccactacagaggacagg
gaggtgaagacggagaggatcgagaggaagaagcagcctgggactgggacaggtcctaac
cctgggtctgggacaggtcctaaccctgggtctgggacaggtcctaaccctgggacaggt
cctaaccctgggactgggacaggtcctaaccctgggacaggtcctaaccctgggactggg
acaggttctaaccctgggactgggacaggtcctaaccctgggactgggacaggtcctaac
cctggggcggggacaggtcctaagcctgggacggggacagaagagcttcctgaacccaag
cctcagctagagaaggccctgcagctccatgctgacatcccccactgctggttgtatgat
cgcagactgctctggctgaaagaccatcgacaccctggcaactggaagctgttcagagag
tgttggagacagggacagcctgtcctggtgactgggctccataagcctctgaatgcagct
ctgtggaaggcggacagcttcaacctggagtttgctgaccatcagggagacctgctgaac
tgtaaagatggacttgtctcgaactctggaatcaacgagttctgggacggcttcgaggac
ctcaccaagagacccaagtctaaagacggagacaccgtggtgtacaggctgaaggactgg
ccatcaggagaggagttcatggccctgatgccttccaggtatgatgacctgatgaggaat
ctgcccctgcctgagtattgtgaccctgaagggaacctcaacctggcctctcatctgccc
agcttcttcgtacgcccagacctcggaccacgcctctgctgtgcttatggagtggcagcg
tctcaggagcaggactttgggacagccaaccttcacagggaggtctctgacatcgtctct
gtcctggtgtacgtaggagtggccaaggggaacggagtcctgtccaagacgggagtgttg
aagagactggaggaggaagacttggacgacagcgtgaagaagagattaaaggattccagc
gagacgcctggagccttgtggcacatctacattagcaaagatgtggagaaaattaaagac
tttctgcacaagcaggttgctaaggagcagggggcggagatttcagcagagcacgaccca
atcagagagccgggctggtacctgagcaggaagatgcgtcagcgtctgtgggaggagcat
gatgtgcagggcttgaccgtggttcagttcctgggggactctgtcctcatcccggccggg
gcgctgcaccaggtacctctggtgcagaaccttcacagttgtgtccaggtgataaatgac
tttgtgtctccagagcatgtattccactccttccacctgacacaggaactgagatcctcc
agagaagagcccaactacgaagataaactacaggtaaagaacatcttgttccactctgtg
aaggatgcattgacgtcgctgaggaggtacagccaggaggaggaagagaactcctga
DBGET
integrated database retrieval system
