Oncorhynchus mykiss (rainbow trout): 110517885
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Entry
110517885 CDS
T07259
Name
(RefSeq) calsyntenin-3 isoform X1
KO
K22661
calsyntenin 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110517885
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Cadherin related
110517885
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Gene cluster
GFIT
Motif
Pfam:
CLSTN_C
Cadherin
Laminin_G_2
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
110517885
NCBI-ProteinID:
XP_021451407
Ensembl:
ENSOMYG00000000441
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All DBs
Position
3:30627852..30667510
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AA seq
960 aa
AA seq
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MDRMSCLSFLLLCLTSVANGNKANKHKPWIETEYQGIVMENDNTVLLNPPLFALDKDAPL
HYAGEICGFRVHNGPSGSSSVQFEAVVLDRSTGEGLVRSKEPLDCESQREHSFTIQAYDC
GEGPDGANSKKSHKATVHVRVNDVNEFSPVFVERRYEASVPEGRLFDHIVRVEALDADCS
PQYSQICFYDIITPNVPFVIDNDGNIKNTEPLDSKRQRVHTFWVTAFDCGKNRAQADAQV
VVTVKPSCKPGWIGWSKRVEYTPGSGSIPLFPSLHLETCEETVWNIQATVELQTGHIGKG
CDRDSYSDRSVRRLCGAVRGEVDLLPPPSPAANWTSALPTLPSSDSSLVFSFNGSTHVAM
VPDSIAAAVSGDHFTLQLWMRRGGINTQPPTNQARGNRREEETIVCSTVKNGQSNDDSFS
HYSLSVHGCRLSLFYWPDVSAARPVKFLWKLEQVCDSEWHHLSLSVQFPSVTLYVDGVTF
DPALIHDNGAIPNPAPRQRLVIGACWETEDKQKDILNNTIPEGKDTGKYVGGYRGLLSGV
TVRPGSVEPHSVVECLYACREGLDFGDLETLGSGMKVHVNPSQSVLVLEGDDIESFNRAV
QQVTYRNSLRFATPGVRPLKLTTSLRCFNEESCLTLRQLEGYLVVLQPDAPQISLSGVGP
HLARPAPEFEGPRGVPLFPELRIVCSLSHAVNTAAQGMEGGALMSDAVAHTLDGCEVQPL
GEELNPEREELLVDMDALRERGLEIINTTAYIAITGAESISVYEDVLRSVRYRLAKGSAR
FERRFRLSCSEMNGRYTSNELTLEVNFLHSLDSLYHPSHLLASQQQFLHPSHHSGELSGH
TLPNPHRNSVVPGAATVIIMVCVGFLVVMVILGVFRIRSIHRRGEGTGGGSKEDSGQWDD
SALTIIVNPMESYESRMGISADTEGEGEEDEEVVESPDDANDDQRIIIKKEGRDGNPRRY
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatgagttgtctctccttcctcctcctttgcttgacttcggttgccaatggc
aacaaagccaataagcacaagccatggatcgagacggagtaccagggtattgtcatggag
aacgacaataccgttcttctcaacccaccactgttcgccctggataaagacgctccactg
cactacgcaggtgagatctgtggcttccgggtgcacaatgggccctcgggatccagttcg
gtccagtttgaggcggtggttctggaccgctcgacaggggagggcctggtccgctctaaa
gagccattggactgtgagagccagcgggagcacagcttcaccatccaggcctatgactgt
ggagagggccccgatggagccaacagcaagaagtcccacaaggccacggtgcatgtacgt
gtgaacgacgtaaacgagttctccccagtgttcgtggagcgtcgctacgaggcctcagtc
ccagaaggccgtctgttcgaccacatcgtgcgcgttgaggccctcgacgcagactgctcc
ccgcagtacagccagatctgcttctacgacatcatcacccccaacgttccctttgtcatc
gataacgatggtaacattaagaacacagagccattggattcgaagcgccagcgtgtccac
accttctgggtgaccgcgttcgactgtggcaagaaccgagctcaggccgacgcccaggtc
gtcgtcacggtcaaaccgtcctgcaaacccggctggatcggctggtcgaagcgggtggag
tatacccccgggtcaggcagcattcccctgttccccagtttgcacctggagacctgcgaa
gagactgtgtggaacatccaggccaccgtagagctgcagactggccatattgggaagggc
tgtgacagggacagctactcagaccgatcagtgcgcagactctgtggtgctgtgagaggt
gaagtggacttactcccgcccccgtccccagcagccaattggacctcagccttgcccacc
ctcccttcttctgattcatccctggtgttctccttcaatggctccacccatgttgccatg
gtacccgactctattgccgcggccgtatccggagaccatttcaccctccagctgtggatg
agaaggggtggaatcaacacccagcctccgactaatcaggccagaggaaaccgcagggag
gaggagactatcgtctgcagtaccgtcaagaatggtcagtcaaatgacgactccttctcc
cactactctctctccgttcacggctgccgtctatctcttttctactggcccgatgtctcc
gctgcgcggcccgtaaaattcctctggaaactggagcaggtgtgtgacagcgaatggcat
cacctgtccctcagtgtccagttcccctctgtgacactgtacgtggacggagtcaccttc
gaccccgccctcatccacgacaacggagccatacccaaccctgccccacgacagcgactg
gtcattggcgcctgctgggagacagaagataaacagaaggacatccttaacaacaccatc
cctgaggggaaagacacagggaagtatgtgggtggttaccgtggcttgttgtcaggagta
acggtgcggccagggagtgtggagcctcacagtgtggtggagtgtctgtacgcctgcagg
gaggggctggactttggggacctggagaccttgggctcaggcatgaaggtgcatgtgaac
cccagtcagtctgtgctggttctagagggtgatgacattgagagcttcaacagggccgtg
caacaggtcacctacaggaactctctccgcttcgccacccctggagtcaggccactcaaa
ctgaccacctcactcaggtgtttcaatgaggagagttgtcttacgctcaggcagttggag
ggctacctggtggtccttcagcccgatgcccctcagatctccctgtctggggtcggcccc
cacctggcccgccccgcgcctgaatttgagggcccccgtggtgtacccctcttcccggag
ctgaggatcgtgtgctccctgtctcatgctgttaacacagccgctcagggcatggaggga
ggagctctgatgtcagacgccgtggcccacactctggacggctgtgaggtccagcccctg
ggggaggagctaaacccagagagggaggagctcctggtggacatggatgccctgagagag
aggggtctggagataatcaacaccactgcttacatcgccatcacaggagctgagtccatc
tccgtgtatgaggatgtccttcggtccgtccgttaccggctggctaaaggctcggcccgc
tttgagaggcggttccgtctgtcctgctccgagatgaatggcagatacaccagcaacgag
ctcacactggaggtgaacttcctgcactccctggatagtctgtaccacccgtctcacctc
ctggcctcccagcagcagtttcttcacccatctcaccactctggggagctgagtggacac
accctgcctaacccccaccgcaactcggtggtgccaggagcggccacagtcatcatcatg
gtgtgcgtgggcttcctggttgtcatggtgatcctgggagtgtttcgaatccgctccatc
caccgccgtggcgagggcaccgggggagggtctaaggaggatagcggccaatgggatgac
tctgccctcaccatcatcgtcaaccccatggagtcctatgagtctcgtatgggcatctca
gctgacaccgaaggtgagggggaggaggacgaggaagtggtggagtcacccgatgacgcc
aacgacgaccagcgaatcatcatcaagaaagagggcagagacggcaacccccgtcgctac
taa
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