Oncorhynchus mykiss (rainbow trout): 110518004
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Entry
110518004 CDS
T07259
Symbol
tbc1d23
Name
(RefSeq) TBC1 domain family member 23 isoform X1
KO
K22555
TBC1 domain family member 23
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110518004 (tbc1d23)
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110518004 (tbc1d23)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBC1D23_C
RabGAP-TBC
Rhodanese
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
110518004
NCBI-ProteinID:
XP_036833055
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All DBs
Position
1:439965..497128
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AA seq
716 aa
AA seq
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MADAVEEVLEGSWDQDLAEALDSGGSDLELEMDIQGELGLGGGLGLDGEEAGEVIRVQEL
PAQQRAKLWKIALNVAGKGDSLSSWDGVLDLPEQNLIHTRCQQLIDQLGCVAEEEGRDMV
SDVESVITFYCKSRNITFTPDLSWPHLLKPLLGLQLPRSDLYNCFYAIMNKYIPRDCVVK
GRPFHLYRLLLQYHEPELCSFLDTKKITPDSYTIHWLGSLFSSHCLPEVTQAMWDFYLQQ
ADPFLIFFLLLIILVNAKDNILQQEGDSKEDIIKMLEDSPALLEADDIEDLFSLAQYYWS
KTPLSLRKENQNLFGSSLVALKEEDMDLSQALCLPVSVPEILQANQLQPVSNSTPEEGVR
FFVVDCRPAEQYNAGHLSTAFHLDSDLMLQNPSEFSLSVKSLLEAQKQSLESGSIASGEH
LCFMGSGREEEDMYMNMVLAHFLQKNKEYVSIAKGGFMALQQHLTDINVEGPDNYVHWIV
STSGSAEGEALSTTGDKGVKSLVNKMTFALKSKSVIAKEKMISFMENTATPVDRMSFTLP
WPEKGVPDRHVSSSDRVGKPYRGVKPVFSIGDEEEYDTDEIDSSSMSDDDRKEIVNIQTW
MNKPDVKHHVPCNEVKETGHMFPSHLLITATHMYCLREIASRKGFAYIQSRQALNSVVKI
TSKKKHPELITFKFGNSNTAGIEISAVERYLIPNAGDATKAIKQQIMKVLDALESS
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggcggatgcagtggaggaagttcttgaaggcagctgggatcaggatctggctgaggcc
ctggactctggaggctctgacctggagctagagatggacatacagggggagctggggttg
gggggagggctggggctggatggggaagaggccggggaggttattcgagtccaggagcta
ccagcccagcagagagccaagctgtggaagattgcgctgaatgtggcaggtaaaggagac
agtctgtcctcgtgggatggagtcctggatcttccagaacagaaccttatacacacccgc
tgccagcagctcattgaccagctggggtgcgtggcggaggaggagggacgtgacatggtg
tctgacgtagagtctgtcatcacgttctactgtaagtcccgaaacatcaccttcacccct
gacctctcctggccacacctcctcaaacccctgctgggcctgcagctgccccgctccgat
ctctacaactgcttctacgccatcatgaataaatatatcccacgggactgtgtagtgaag
ggccgtccgttccacctgtacagactgctgcttcagtatcatgaaccagaactctgctcc
ttcctcgacaccaagaagatcaccccagactcctacactatacactggctaggcagtctg
ttctccagtcactgcctaccagaggtgactcaggccatgtgggacttttacctccaacag
gctgaccccttcctcatcttcttcctcctgctcatcatcctcgtcaatgccaaagataac
atcctgcaacaagaaggggacagtaaagaagatatcattaagatgttggaggactctcct
gccctgttagaggctgatgatatagaagacctgttctctctggcccagtattactggagc
aagacccctctgtctctcagaaaggagaaccagaacttgtttgggtccagcctggtggca
ctgaaggaggaagacatggatctgagtcaggctctctgtctccctgtgtctgtccctgag
atactgcaggccaaccagctgcagcctgtgagtaacagcacccctgaggaaggggttcgg
ttctttgtggtggactgtcgacctgctgagcagtacaacgctggacacctctctactgcc
ttccacctggactcagacttgatgctgcagaatccgtcagagttcagcctatcggtgaag
tccctcctggaggcccagaaacagagtctagagtctggctccatcgctagtggagaacac
ctctgcttcatgggttcagggagggaggaggaggacatgtacatgaacatggtgctggca
cacttcctacagaaaaacaaagaatacgtcagtatcgctaaaggtggttttatggccctg
cagcagcacctaacagacatcaatgtggagggaccagacaactatgtccactggatagtc
agcacctctggatcagctgaaggagaggctttgagcaccacaggggataaaggagtcaag
tctctggtcaacaagatgacctttgccctcaagtccaagtctgtcatagcgaaggagaag
atgatcagctttatggagaacacggctacacctgtagacagaatgtctttcactctcccc
tggccagagaagggggtccctgaccgacatgtgagcagtagtgaccgggttggaaaacct
tacagaggagtgaagccagtgttcagcatcggtgatgaggaagagtatgatacagatgag
attgacagctcgtccatgtcggatgatgacaggaaggagatcgtaaacatccagacgtgg
atgaacaaaccagacgtgaagcaccatgttccctgtaatgaggtcaaggaaaccggacac
atgttccccagtcacctgttgatcacagctacccacatgtactgtctgagggagatcgcg
tccaggaagggttttgcctatatccagtccagacaggccctcaacagcgtggtcaagatc
acctccaagaaaaaacacccagaactcatcaccttcaagttcggcaacagcaacactgct
ggaatagagatctctgctgtggagaggtatctgatccccaacgcgggtgacgccaccaag
gccattaaacagcagatcatgaaggttctggatgccctggagagttcctag
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