Oncorhynchus mykiss (rainbow trout): 110518397
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Entry
110518397 CDS
T07259
Name
(RefSeq) protein CLEC16A isoform X1
KO
K19513
protein CLEC16A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110518397
03029 Mitochondrial biogenesis [BR:
omy03029
]
110518397
Membrane trafficking [BR:
omy04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
110518397
Mitochondrial biogenesis [BR:
omy03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
110518397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLEC16A_C
FPL
DUF6136
Flu_NS2
Motif
Other DBs
NCBI-GeneID:
110518397
NCBI-ProteinID:
XP_036828033
LinkDB
All DBs
Position
Unknown
AA seq
1117 aa
AA seq
DB search
MFGRSRSWGGGQGKTKNIHSLDHLKYMYHVLTKNTTVTDSNRNLLVETIRSITEILIWGD
QNDSSVFDFFLEKNMFAFFLNILRQKSGRYVCVQLLQTLNILFENISHETSLYYLLSNNH
VNSIIVHKFDFSDEEIMAYYISFLKTLSLKLNNHTVHFFYNEHTNDFALYTEAIKFFNHP
ESMVRIAVRTITLNVYKVSLDNQHMLHYIRDKTAVPYFSNLVWFIGSHVIELDKCVQTDQ
EHRNRGKLSDLVAEHLDHLHYLNDILTINCEFLNDVLTDHLLNRLFLPLYVFSLVCPEQS
EDRKINPQVSLNLLSQVFLIIHYQPLVNSLAEVIFNGDLSVFTQHKNTVSAGVRRFTKPP
ESLERSLELSCNRGRKRAQKRPNYKNLGEEEEEEERPGTGEEGLEDSEREREKAKGTEGS
SKGSSRTSGEMEEIEMVVMDKGKETSSATEQNITDEEKTAAAARTQRKRPFLDMVYSALD
CSEDDYHALFVLCLLYAVSHSKGINRELLERLQLPVPDQERSCYSQVLVERLIRVMNVAA
QPDGKVRLATLELSCLLLKRSVLSSSSSSSSPAHCIIKDVHLACLEGAREESLHLLRRFY
KGEEIFLDMFEDEYRSMTSKPLNVEYLMMDASVLLPPTGTPLTGIDFVKRLPCGGVEKTR
RAIRVFFMLRSLSLQLQGEPETQLPLTRSEDLIKTDDVLDLNNSDLIACMVVSKEGGQAQ
RFLAVDVYQMSLVEPETKRLGWGVVKFAGLLQDMQVSGVEDDSRALNIIIHKPSSNPHAK
PLPILQANFIFADHIRCIIAKQRLAKGRIQARRMKTQRIAALLDLPVQPSSSEVLGFGQT
GNTAAGGQLPFRFYDQSRRAPNDPTAQRSVFASVDKVPGFAVAHCVSQHSPSPLSSPSPP
SSGSTGRCDSVTASTISANSPTDEETFLERTPPSSSGGEAGGRGGELTGSCSPVPSVLAP
SLTPASQPNISLLTDDNADSLSVESLTLLPPADHLHALGSHTHLGTDTAIREEEEEEEEE
LEKREGKEPKEEVEGSAMEEEEEEEEEEEETETETTIQETAEAEMGTPTEQDTPLEAEGD
TPLSAASEGEETGQDTPTGEEAEKDTPPKEDTPTETA
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtcggtcacggagttggggaggaggacaggggaaaactaaaaatattcattcc
ctggaccatctcaagtatatgtaccatgtcctgactaagaacacgacggtaaccgacagc
aacaggaacttgctggtggagaccattcgctccatcactgagatactcatctggggagac
cagaacgacagctccgtcttcgacttcttcctggagaagaacatgtttgcgttcttcctg
aatatccttcgccagaagtccggtcgctacgtctgtgtccagctactccagacgctcaac
atcctgtttgaaaatatcagccacgagacgtcgctctattacctgctgtccaacaaccac
gtcaactccatcatcgttcacaagtttgacttctcagatgaggagatcatggcctattat
atctccttcctgaagaccctgtcactcaaactgaacaaccacaccgtgcacttcttctat
aacgagcacactaatgattttgccctgtacaccgaggccattaagttcttcaaccaccca
gagagcatggtccgtatcgcagtcagaaccatcacactgaacgtctacaaggtctcattg
gacaaccagcacatgctgcactacattcgagacaagacggcggtcccttacttcagtaac
ctggtctggttcatcggctcccacgtcatagagctggacaagtgtgttcagacggaccaa
gagcatcgtaaccgggggaagctgagtgacttggtagcagagcatctcgaccatctccac
tacctgaacgatatcctgactatcaactgtgagttcctgaacgatgtcctgacagaccac
ctgctcaaccgtctgttcctgcctctctacgtcttctctctggtctgccctgaacagtct
gaagatcgtaagatcaaccctcaggtgtcccttaacctactgtcacaggtgtttctcatc
atccactaccagccgctggtcaactctctggctgaagtcatcttcaacggagacctgtct
gtcttcacacagcacaaaaacacagtcagcgcaggcgtccgtcgcttcaccaagcctccc
gagtctctggagcggtctctggagctgtcctgcaatcgggggcgcaagcgagcccagaaa
cgccccaactataagaacctgggagaggaggaggaggaagaggagaggccggggacagga
gaggagggcttggaggacagcgagagagagagggagaaggctaaaggtacagaagggagc
agtaagggaagcagcaggacaagtggggagatggaagagatcgagatggtggtgatggac
aaggggaaggagacgtcatcggcgacggaacagaatatcaccgacgaggagaagactgct
gccgctgctcgcacacagaggaagagaccgttcctagacatggtgtacagtgctctagat
tgtagtgaagacgattatcatgctctgtttgtcctctgtctcctctacgctgtgtcacac
agcaaagggatcaaccgtgagttgttggagaggctgcagttaccagtcccagaccaggag
aggagctgttacagccaggtgttggtggagagactcatacgagtgatgaacgtggctgca
caaccagatggtaaggtacgtctggctactctggagctgagctgtctgctgttgaaacgg
tccgtcctctcttcctcctcctcctcctcctctcctgctcactgcatcatcaaggatgta
cacctggcctgtctagagggagccagagaagagagtctgcatctcctacggcgtttctat
aagggggaggagatcttcctggacatgtttgaagatgagtacaggagcatgacgagtaag
cccctgaacgtggagtacctcatgatggacgcgtctgttctacttcctcctactggtact
cctctgactggaatagacttcgttaagagactgccctgtggaggagtagagaagaccaga
cgggccatccgtgtgttcttcatgctgagatcattatctcttcagctgcagggagaacca
gagacgcagcttcctctcactcgctctgaagacctcatcaagacagacgatgtcctggac
ctaaataacagtgatctgatagcctgtatggtggtcagtaaggaaggaggtcaggctcaa
cggttcctggcggtggatgtttaccagatgagtctggttgaacctgaaaccaaacggttg
ggctggggtgtggtcaagttcgctggtctgttacaggacatgcaggtgtctggggtagag
gatgacagcagagctttaaacattatcatccacaaaccctcgtccaacccccacgccaag
cccctccccatcctgcaggcaaacttcatattcgccgaccacatccgctgcatcatcgct
aagcaacgcctggccaagggcaggatacaggccagacgcatgaagacacagaggatagca
gcgttactcgaccttcctgtccagcccagttcgtcagaggttctgggcttcggccagaca
ggaaacactgccgccggtggtcaactccctttccgcttctacgaccaatcgcgtcgagcg
cccaacgaccccaccgcacagagatctgtgttcgcctccgttgacaaagttccagggttt
gcggtggcccactgtgtctctcagcacagcccgtcccccctctcctccccctccccaccc
tcctcaggcagcaccggacgatgtgactctgttacagccagtacgatatcagccaacagc
cctacagatgaggagacgttcttggagcgcactcctccttcgtcctccggtggagaggca
ggaggaagaggaggagagttaaccgggtcttgttcccctgtcccgtctgtcctggccccc
agcctcacccctgcctcccagcctaacatctctctactgaccgacgacaacgcagactct
ctgagcgtcgagtcactgaccctgctgcccccggctgaccacctacacgcactcggctca
cacacacacctcggcactgatacggctatcagagaggaggaggaggaggaggaggaggag
ctagagaagagagaagggaaggagccaaaggaggaagtggaaggttcggcgatggaggaa
gaggaggaggaggaagaggaggaggaggagactgaaaccgaaacaacaattcaagagacg
gctgaagcagagatgggaacgcccactgagcaagacacgcccctagaggcagagggagac
acacccctttcagctgcatcagaaggggaggagactggtcaggacacacccacgggagag
gaagcagagaaagacacacctccgaaagaggacacacccaccgaaacagcgtga
DBGET
integrated database retrieval system
