Oncorhynchus mykiss (rainbow trout): 110518684
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Entry
110518684 CDS
T07259
Name
(RefSeq) nuclear factor 7, brain
KO
K12012
tripartite motif-containing protein 35
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110518684
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110518684
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRY
SPRY
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-RING_6
zf-Nse
DUF5930
DUF4214
U-box
Motif
Other DBs
NCBI-GeneID:
110518684
NCBI-ProteinID:
XP_021451810
Ensembl:
ENSOMYG00000001374
LinkDB
All DBs
Position
3:32268649..32271705
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AA seq
464 aa
AA seq
DB search
MAASLSLLEEHLSCPVCCDIFRNPVVLKCSHSFCEECLQKYWKDMENPLCPACRAECSSE
EQGLSLALKSLCDSLQKGGEKIRSDTCRLHGEKMKIFCFDDKQPICVVCYTSKKHKGHTC
YPIEEAVPDLKSEIQAVVSTLKNKLANRNAAKMGHQSWEEHIKGQAQRAEEQIRREFKKL
QQFLEEEETARIATLREEEQKKSEVMRERAETLAREITILSETVVAVDKEMEVDNITFLK
NYKAILNRADCTFPDTADTEVVSGALIDMAKHVGSLKFKVWEKMLEFVDYTPVIMDPNTM
SSKFTLSDDLTTMTYCDERQSLPDNPERFLNVGVLGSEGYSKGTHYWDVDVGDNDNWILG
VAKESIPRKTQVKMEPRSGLWIIKYICGKYKAGIKSYVQIVVDESPRVIRVQLDCNRGEV
KFFDLTKNTTLCTFKDKFTEKMFPYFNSGSGICPLRLLGKAKTG
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atggctgccagtttgtctctcttggaggagcacctctcttgtcccgtgtgctgtgacatc
ttcaggaaccctgtggtcctgaaatgtagccacagcttctgtgaggagtgtctgcagaaa
tactggaaggatatggagaatccgctgtgtcctgcatgcagggcagagtgttcatctgag
gagcagggtttaagcctcgccttaaagagtctctgtgattccttacagaaggggggtgaa
aagatcagatctgatacctgccggctgcatggagagaaaatgaaaatcttctgtttcgat
gataaacagcccatctgtgttgtctgctacacatcaaaaaaacataaaggtcatacctgt
tatcccattgaggaggctgtgccggatttgaagagtgaaattcaggctgtggtttccact
ttgaagaacaaactagcaaacaggaatgcagccaagatgggccatcaaagctgggaggag
cacatcaagggccaggcccaacgtgcagaggagcagataaggagggagtttaagaaactc
cagcagttcctagaagaggaagagacggccaggatagctaccctgcgagaggaagaacag
aagaaatctgaagtgatgcgagaaagagccgagacattagccagagagatcacaatcctt
tcagagacagttgtagctgtcgataaggaaatggaagtggacaacatcacattcctcaag
aactacaaggccatacttaacagagccgactgcacattcccagatactgcagatactgag
gtagtatcaggagcactgattgacatggccaaacatgtaggatctctcaagttcaaagtt
tgggagaagatgcttgagtttgttgactacactcctgtgatcatggatccgaacacgatg
tcctctaagttcaccctctctgatgacctcaccactatgacatactgtgacgagaggcag
agtctcccagacaatcccgaaaggtttcttaacgtaggagtgttgggttctgaagggtac
agtaaaggcacccattactgggacgtggacgtcggagataatgataactggatcttagga
gtagccaaagagtccattccacgcaagactcaggtcaaaatggagcctcggagtgggttg
tggatcatcaaatacatctgtgggaaatacaaagcaggtataaaatcatacgtccagatc
gtggtagacgagagcccacgagtgatccgagtacaactggactgtaacagaggggaggtg
aaattctttgacctcaccaagaacacgaccctgtgcaccttcaaagacaaattcactgaa
aagatgttcccatactttaacagtggaagtgggatttgcccactacgccttttaggaaag
gcaaaaactggctaa
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