Oncorhynchus mykiss (rainbow trout): 110519040
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Entry
110519040 CDS
T07259
Symbol
prdm13
Name
(RefSeq) PR domain zinc finger protein 13
KO
K24645
PR domain zinc finger protein 13 [EC:2.1.1.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110519040 (prdm13)
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
110519040 (prdm13)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
PRDM2_PR
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_7th_ZNF462
zf-BED
zf-C2H2_15
Zf-C2H2_ZNF451
C2CH-3rd_BIRD-IDD
Motif
Other DBs
NCBI-GeneID:
110519040
NCBI-ProteinID:
XP_021452018
Ensembl:
ENSOMYG00000007035
UniProt:
A0A8C7NXE3
LinkDB
All DBs
Position
3:complement(33810645..33818250)
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AA seq
631 aa
AA seq
DB search
MVLKPLHGEPAMQATRASAISVFADCSIPAGLRIGPVPGVFKLGKYVTDRKEVVTKRKIR
LLRGEIVDESGCPVPDWIGCIRAARNSQEQNLEAVSDLPSGQIFYRVLTEIPAGEELSVW
YSNTLAQWYDIPTTATPTHDEKGEERYICWYCWRIFKYPNTLKAHVHFHCALSNGRSFVN
SEQARSTDSFSRSPKSGDIPYTSASPRNGHNTSISDSVRRTVSSSPFLNKVGVSKKPSSE
EQDRALDMSVTSARNHGHLMGLGATSSMLSNMGFHPGVRSAFKPMGQTKVPTADVYREET
NGKHNGLGFSKLMGNMKSTRALNEPLTGSHPSKCVHPLDSTSPVVPCANTLRGFPLIPNF
EETSAFKHVESRMHSGLSPSRYSQMSSGFHFERFSLPQFDGVKPYNGDCNIPLMPFTVYN
GELLYSSPYYPLKFHFSNLLKYPETMSYFGAPALNQDLGSITNIDREIAMHTQQLSEIAV
EKNRTRLDSMPTANTGSGKPKKGHLCLYCGKLYSRKYGLKIHMRTHTGYKPLKCKVCFRP
FGDPSNLNKHIRLHAEGNTPYRCEFCGKVLVRRRDLERHVKSRHPGQTIKKAEDKTESIF
EDQEQKSDNDSDVDVCFTDDQSDQESSKIDD
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggttctcaaaccactgcacggagagccagccatgcaagcaactcgggcatccgctatc
agtgtgtttgcagactgcagcatccccgccggcctgcggataggaccggtgccgggcgtc
ttcaaactagggaaatacgttactgatcgcaaagaggtcgtaaccaagagaaagattcgg
ctgctgaggggtgaaatcgtggatgaatcaggttgccctgtgccagactggattgggtgt
atccgggcggccagaaacagtcaagaacagaacttggaggctgtctcagatctacctagt
gggcagattttctatcgtgtgctgacggagatcccagcaggcgaggagctgagtgtgtgg
tactccaacactctggctcagtggtacgacatccctaccactgccactccaacacacgac
gagaaaggtgaagaacgctacatttgctggtactgctggagaatatttaaatatcccaac
acactcaaggcccacgtccatttccactgcgctctgagcaacgggcggagctttgtgaac
agcgagcaggccaggagcacagacagcttcagcaggtcacccaaatccggggacattccc
tacacctccgcctcgcccaggaacggccacaacacctccatctcagactctgtcagacgg
accgtgtcttcctcacctttcctcaacaaagttggcgtatcaaagaaacccagctctgag
gagcaggacagagcacttgacatgagcgttacctcggccagaaaccacggacatctcatg
ggccttggcgcaacgtcttcaatgttgagcaacatggggttccacccaggcgtgcgctct
gcattcaagcccatgggccaaaccaaagtccccacggctgacgtctacagagaggaaact
aatgggaagcataatggactaggcttcagcaaactcatggggaacatgaaatcaacgcga
gccttgaatgaacctttgaccggaagccatccctccaagtgcgtccatccattagattct
acatctcccgttgtcccgtgcgcaaacaccctcaggggttttccgttaatacctaatttt
gaggagacatcagctttcaagcacgtggagagccgaatgcactctggactgtccccctcg
cgctactctcagatgtcctctggattccattttgagaggttttctctgcctcagtttgat
ggcgtcaagccatataatggagattgcaatatccccctcatgccattcaccgtgtacaat
ggcgagctgctttatagttcaccatactacccactgaaattccattttagcaatctccta
aaatacccggagacaatgtcctactttggcgcacctgcactcaaccaagacctgggttca
attaccaacattgacagggagatagccatgcacactcaacagttgtctgaaatagccgtt
gaaaagaaccgaaccaggctcgactctatgcccactgctaacacaggctcagggaagccc
aaaaagggacacttatgtctttactgtggtaaactgtactctcggaaatacggactcaag
attcacatgagaactcacacagggtacaaaccgttgaagtgcaaagtttgttttcggccc
ttcggtgaccccagcaacctgaataagcacatccgtctgcacgcggaagggaacaccccg
tacaggtgcgaattctgtggcaaggtgctggtgcgccggagggatttggagcgtcatgtc
aaatcaaggcaccctggacaaacaataaaaaaagctgaggacaaaaccgagagcatattc
gaggatcaagagcaaaagagcgacaatgacagcgacgtagatgtatgcttcaccgatgat
cagagcgaccaagaatccagtaaaatagatgattaa
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