Oncorhynchus mykiss (rainbow trout): 110519328
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Entry
110519328 CDS
T07259
Name
(RefSeq) transcription factor Dp-1 isoform X1
KO
K04683
transcription factor Dp-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
omy04110
Cell cycle
omy04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110519328
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
110519328
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
110519328
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110519328
03036 Chromosome and associated proteins [BR:
omy03036
]
110519328
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix cell cycle-controlling factors, DP
110519328
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
110519328
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DP
WHD_E2F_TDP
Protamine-3
Motif
Other DBs
NCBI-GeneID:
110519328
NCBI-ProteinID:
XP_036837826
LinkDB
All DBs
Position
7:complement(528564..541749)
Genome browser
AA seq
405 aa
AA seq
DB search
MAMDAAVIGANGEMKVFYNQNLSPSKGVLSLVTVHPQSLSVGKQLLPKTLGPSNVNIAPH
MVMGTPQRPSGSGGLVMGSPHTPSTQYRPQSQPPDASPWSTGKRGTGKKGDKNGKGLRHF
SMKVCEKVQKKGVTTYNEVADELVAEFSANDTLLSPGDSHSYDQKNIRRRVYDALNVLMA
MNIISKEKKEIRWIGLPTNSAQECQSLEVERQRRLERINQKQSQLQELILQQIAFKRLVQ
RNRTAEQQAGRAPPPNSVINLPFIIINTSKRTVIDCSISNDKFEYLFNFDNMFEIHDDIE
VLKRMGLACGLEVGQCSPEDLKEARTLVPRALEPYVTEMATGPISNVYITGASSTNGGGR
RHTSSSDGTVASISNDSHYSASRGHTPVSYMADEEEDDEDYDDND
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggatgcggctgtgatcggtgccaacggagagatgaaggttttctacaaccag
aacctcagtcccagcaaaggtgtcctgtccctggtgacagtccacccacagtctctctct
gtggggaaacaactgcttcccaaaaccctggggccctccaacgtcaacatcgccccacac
atggtgatgggtacccctcagaggcccagtgggtcaggggggttagtgatgggcagccct
cacacacccagtacccagtacagaccacagagccagccccctgatgcctctccctggtcc
accgggaagcgtggtactggtaagaagggggataagaacgggaagggtcttaggcatttc
tccatgaaggtgtgtgagaaggtgcagaagaagggagtaactacctacaatgaggtggct
gacgagctcgtggcagagttcagcgccaacgacaccctcctctcgcccggcgactcgcat
tcctatgaccagaagaacatccgacggcgtgtgtacgacgcgctcaacgtgctcatggcc
atgaacatcatctctaaagagaagaaagagatccggtggatcggcctgcccaccaactca
gcccaggagtgtcagagcctggaggtggagagacagagacgactagagaggatcaaccag
aaacagtctcagcttcaggagctcattctacagcaaatagcgttcaagcgtctggtgcag
cggaatcgtacggcggagcagcaggcgggcagggctccgcccccaaactctgtcatcaac
ctgcccttcatcatcatcaacacctccaagaggaccgtcatcgactgcagcatctccaac
gacaagtttgagtacctgttcaactttgacaacatgtttgagatccatgatgacattgag
gtgttgaagagaatgggtctggcctgtggtctggaggtgggccagtgttcaccagaggac
ctgaaggaagctcgtaccctggtgcccagagccctggagccctatgttacagaaatggcc
acgggtccaataagcaacgtctacatcacaggagcctcgtctacaaacggaggaggacgc
cgtcacacaagtagctccgatggcacggtggcgtccatttccaacgactcacactacagc
gcctcgcgaggccacacccctgtgtcctacatggcagacgaggaagaggatgacgaagac
tacgacgacaatgattaa
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