Oncorhynchus mykiss (rainbow trout): 110519348
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Entry
110519348 CDS
T07259
Name
(RefSeq) TBC1 domain family member 15-like
KO
K20168
TBC1 domain family member 15
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110519348
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110519348
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110519348
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RabGAP-TBC
RabGap-TBC_2
PH_RBD
Motif
Other DBs
NCBI-GeneID:
110519348
NCBI-ProteinID:
XP_036812507
LinkDB
All DBs
Position
21:2588642..2667278
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AA seq
718 aa
AA seq
DB search
MCQKSATHIDEYVVICSALPSQNNWKRVSCPTTSSSAETGDMATSAGFKVLYEHDGVFIH
TNPERSEEQDSLTSGSLRVLDQDGDIVLEYKPVEDVDHSAMLCAAKESSSVFEWGQRHQG
PSQDPGDKPTRQVEHQLSCETEWDMVHTVQFRKKPSNNEGAPPQPAPIPEKSKGSRLFFR
LSDLASVRVKEEGWSYLVFTLRDCNMGVELPALHFHQGGSEVFLDCLRKYLLLTESTTDA
SLLQVSPHSRALSQSFENLLDDATFGLITKFSQDPVTTTLGGFSKVTNYLFDAFRGPDTV
LLKERPVGEVADLLNEAIPGLDINQLEEPGFEVITRIDLGVLPEVRRRGPVGAEEWNTNM
DPEGRMRNISHLKQTIFKGGLCHVLRKEAWKFLLGYFPWESTLEERRSLTRRKTDEYFRM
KLQWKSVSEEQEKRNSMFRDHRSLIEKDVNRTDRTNTFYEGQDNPGLILLHDVLMTYCMY
DFDLGYVQGMSDLLSPILYVMEDEVDAFWCFVSFMDQMHQNFEEQMQGMKTQLIQLSTLL
RLLDLSFWNYLVAQDSGHLYFCFRWLLIRFKRELSFPDVLRLWEVMWTGLPCQNFHLLVC
CAILDSEKHQIMEKQYGFNEILKLINELPMKLDIVAILNKAEAICLQLKSCKDLPNSVVE
MLGFIDGTDTESSSQSEDTERTNRPDSPEPSTPPDDQQDLVSEDDPSGNNGTLTGRSA
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtgtcaaaaatcagcaacacacattgacgagtatgtagttatttgttctgccctcccc
tcccaaaacaactggaaacgcgtgagctgtcctactacgtcgtcgtcagctgagacaggc
gacatggcgacttcagcgggcttcaaggttctatatgagcatgatggagtttttatacac
accaacccagaaaggagtgaggagcaggattccctgacttcgggatccctgcgtgtcctg
gaccaggatggagacatagtgctggaatataaacccgtggaagatgttgaccactctgcc
atgctgtgtgctgccaaggagtctagctctgtgtttgaatggggccagcggcaccagggt
ccgagccaagacccaggagacaagcctaccaggcaggtagagcaccagctgagctgtgag
acagaatgggacatggttcacactgttcagttcaggaagaaacccagcaacaatgaaggt
gctcctcctcaacccgctcccatcccagagaagagtaagggttcccggctgttcttccgt
ctcagtgacctggcctcggtcagggtgaaggaggagggctggtcctacctggtgttcacc
ctcagagactgcaacatgggggttgagctgcctgccctacactttcaccagggaggtagt
gaagtcttcctggattgtctcaggaaatacctgctgctgacagagtctaccacagatgcc
tccctcctccaggtcagcccccacagcagagctctgtcccagtcctttgagaacctgcta
gatgatgccaccttcggacttattacgaagttttctcaggacccagtcaccactacgctg
ggtggtttttccaaggtgaccaactacctgtttgatgcgttccggggtcccgacacggtg
ctactgaaggagaggcctgtcggggaggtggctgacctgctgaatgaggccatacctgga
ctggacatcaaccagctggaggaaccaggctttgaggttatcaccaggattgatcttggc
gtgctgccagaggtccggcgtagggggcctgttggggcggaggagtggaacaccaacatg
gaccctgagggacgcatgaggaacatctcacacctcaaacagaccatattcaaagggggt
ctgtgtcacgtgttgaggaaggaggcatggaagtttctgctgggctacttcccctgggag
agcaccctggaggagaggaggagtctgaccaggaggaaaacggatgagtacttccgtatg
aagctccagtggaagtcagtgagtgaggagcaggagaaacgcaacagcatgtttagagac
cacaggagtctaatagagaaagacgtgaacaggacagatcggaccaacactttctatgaa
ggacaagacaacccaggactgattctgctgcacgatgtcctcatgacctactgcatgtat
gactttgacctgggctatgtccagggtatgagtgacctgctgtctccgatcctctatgtg
atggaggacgaggtggacgccttctggtgctttgtctccttcatggaccagatgcaccag
aactttgaggagcagatgcagggaatgaagactcaactgatccagctcagcactctgcta
cgactactggacctgtccttctggaactacctggtggcccaggactctggtcacctgtac
ttctgcttccgctggctcctgattcgcttcaagagagaactgagtttccctgatgtcctg
cgtctttgggaggtaatgtggaccgggctgccgtgccagaacttccacctgctggtgtgc
tgtgccatcctggactcagagaaacaccagattatggagaaacaatacggcttcaatgag
atcctcaagctcataaatgaactgccgatgaaactggacatcgtggccatcctcaacaaa
gctgaagctatatgcctgcagctgaagagttgtaaggatttgcccaactccgtggttgag
atgcttggattcatcgacggcacagacacggagtcatcatcccagtcagaggacactgag
agaacgaacagaccagactctccggaaccttctacaccgccagacgaccagcaggactta
gtctctgaggacgaccccagcggcaacaacgggacactcacgggacgcagcgcgtga
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