Oncorhynchus mykiss (rainbow trout): 110519559
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Entry
110519559 CDS
T07259
Name
(RefSeq) semaphorin-6D isoform X1
KO
K06842
semaphorin 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
110519559
NCBI-ProteinID:
XP_036820423
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All DBs
Position
26:complement(40938030..40983650)
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AA seq
1148 aa
AA seq
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MVRRAGLLLSILLATATHTMSASFPEDSIPLDVVDAHFSRQYPVFRGRLSGNESQHRLDF
QLMTKIQDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGEADRKNCAMKGKHRDECH
NYIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALFA
DGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGNYVYFFYRE
IAAEHNNLGKAVYSRVARICKNDVGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQS
ITDIININGVPSVVGVFTTQMNSIPGSAVCAFSMDDIEKVFRGRFKEQKTPDSVWTAFPE
ERLPKPRPGCCAGHGQAESYKTSIEFPDETLLFIKSHPLMDSSVPNIGDEPWFTKTRVRY
RLTALAVDNAAGPHGNYTVLFIGSEAGVVLKVLAKTSPLSLNDSILLEEIDLFNRAKCLS
NSEDDRHILSLHVDRDTHSVYVAFSSCVVRMPLSRCERHTNCHKSCIASRDPYCGWMPHG
ACERILPGVLSGYEQDVEFGNTVQLGDCHVFLATTSATDYKSFGDPTSDMELSSTSFTDQ
PSGPIHPPVPPVLTPTSSPHPGIGPGEGPGLGPGAGFPDLYGSGFVQQDDPATSHSLESL
PGGLEGVWEIQAGEANQMVHMNILISCVLAAFLLGALVAGLVVFCYRDSFLRHKPRHAHK
DAESAPSCSNSTGSFAKLNGLFDSPVKEYQPSLDCPKLYTNLLSSGKDLTPNGDTKTMIL
RDGCQPPELAALPTPESTPVLQQKGLQPIRNQWERANHHGKINGPRKNSNSTSSSIAKSP
QFHPSSPPPHPQPHPHPALGHSHIPSAVVLPNATHEYRSGYHGNPTDDVTPPRTLDRKPE
NMEHLQATPPHSKGSRKEQKRSLDARNTLNNLLKHLNDANTANASSKAILQEGAGSAPRP
SRQHLMLEPLGDITEVPPKVPSREASLYSPSSSSSLPRHSPTKRVDVPLPSTPSSPTGSL
GMGGSMSGTLERRYGSHHRISSHRHSLTATSPNGVNMGVSLSHQHSMNRGGYMPPTPPSR
LDSQRGLHSPHQHPHPPSLSRQSSYSGHGSLPRQGLKRTPSLKPDVPPKPNAFTPQTPQM
RVVNKYSY
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atggttaggagagcaggccttctgctcagcatactgctagctacagccacacacaccatg
tctgccagcttcccagaggacagtatacccctggacgttgtcgatgcacacttctcgcgg
cagtacccagtgttccgaggtcgtctgtcggggaacgagtcacagcacagactggacttc
caactgatgaccaagatacaggatacactgttcatcgctggcagagaccaggtgtatcta
gtgagtctccgggaatcctacaggaatgagatcattccctacaggaagttaacatggagg
tcaggcgaggcagacagaaagaactgtgccatgaaggggaaacacagagatgagtgtcat
aactacatcaaggttctggttcccagaaatgatgacctggtgttcatctgtggaacaaac
ggcttcaaccccatgtgccgatactacaggctggataacctggagtttgatggggaggaa
atcagcggactggcacgatgcccgtttgacgccaagcagaccaacgtcgctctgttcgct
gacgggaagctgtactcggcaacggttgctgacttcctggcgagcgacgcagtgatctac
cgtagtatgggtgacggctcggccctcaggactatcaaatatgactccaaatggctgaaa
gagccccatttcctgcatgcagtggattatgggaactatgtctacttcttctacagagag
atcgcagcagaacacaacaacttgggcaaggccgtctactccagagtggctcgtatctgt
aagaacgacgtaggcgggtctcagcgtgtgttggagaaacactggacgtccttcgtcaag
gccagactcaactgttctgttcctggagaatcgttcttctacttcgatgttctacagtcc
atcactgacatcatcaacatcaacggagttccttctgtggtgggagtcttcactacacag
atgaacagtatcccagggtctgcagtgtgtgcgttctccatggatgacatagagaaggtg
ttcagaggacgatttaaagaacagaaaacacctgactctgtctggaccgccttcccagag
gagagactgcccaaacccaggccaggctgctgtgcgggtcacggccaggctgagtcctat
aagacctctatagagttccctgatgagaccctcctcttcatcaagtctcaccctctcatg
gactcctccgtgcctaacataggagatgagccctggttcaccaagacacgcgtcaggtac
aggctgacagccctggcggtggacaatgcggctggtccacatggtaactacacggtgctg
ttcatcggttcagaggcaggcgtggtgctgaaggttctagccaagacttcccctctgtcc
ctaaacgacagcatcctattggaggagattgacctgttcaacagagccaagtgtctgtct
aacagtgaggatgacaggcatattttgtcgctccatgttgacagagacacacacagtgtg
tatgtagctttctctagctgtgtggttcgcatgcctctcagccgctgtgagcgacacact
aactgccacaagtcttgtatagcgtccagggacccctactgtggctggatgcctcatgga
gcctgtgagaggatcctgcctggagttctgtctggttatgagcaggatgtagagtttggg
aacacggttcagctgggagactgccatgtgtttttggccactacatcagcgacagattac
aaatcatttggtgacccgacctctgacatggagttgtcatctacgtcattcacagaccag
cccagtgggcccatacaccccccagtacccccagtactcacccccacctcgagcccccat
cctgggattggtcctggggaagggcctgggttggggcctggggctggttttccagacctg
tatggctcagggtttgtgcagcaggatgacccggccacctcccattcactagagtcactc
ccagggggcctagagggtgtgtgggagatccaggcgggagaagccaatcagatggtccac
atgaatatcctgatcagctgtgtgttggctgccttcctcctgggggcgctagtggccggc
ctggtggtgttctgctacagagactccttcctccgccacaagccccggcacgcccacaaa
gatgcagagtcagccccctcctgcagcaactccaccggatccttcgctaagctcaacggg
ctcttcgacagtcctgtcaaggagtaccagccaagtctggactgtcccaagctgtacacc
aacttactgagcagtggtaaggacctgacgcctaacggagacaccaagaccatgatcctc
cgggacggctgtcagccccccgagctggccgccctgcccacccccgagtctacccctgtg
ctgcagcagaaaggcctgcagccaatcaggaaccaatgggagcgagccaatcaccacggg
aagatcaacggacccaggaagaactccaactctacctcctcctccattgccaagagtccc
cagttccaccccagttccccccctcctcacccccagccccacccccaccctgcgctggga
cactcccacatccccagcgccgtcgtccttcccaacgccacgcacgaataccgcagtggt
taccatggaaacccgaccgacgacgtcacgccgccgcgcaccctggacaggaagccagag
aacatggaacacctgcaggccacgccccctcattctaaagggagcagaaaggagcagaag
aggtcactggatgccaggaacacactgaacaacctgctgaagcacctgaacgatgctaac
acggctaacgctagctccaaggctatcctccaagagggggccggctcagcaccccgaccc
agcagacaacacctgatgctggagcctctaggggacatcactgaggttccccccaaggtc
cccagccgagaggcctctctttactccccctcctcctcctcctccctgcccaggcacagc
cccaccaagagggttgacgtcccactgccctccacccctagctcccccacaggcagcctg
ggtatgggaggaagcatgagcggcaccctggagaggaggtacggctctcatcacaggatc
tcttctcacagacactccctcaccgccacctctcccaacggggtcaatatgggggtgtcg
ttgtcccaccaacacagtatgaacagaggggggtacatgccccccacccctccctccaga
ctggactcccagagggggcttcactccccccatcaacacccccaccccccctccctgtcc
cgccagagcagctacagtgggcacggctcgctcccccgccaggggcttaaacggaccccg
tccctaaagcctgacgtcccccctaaacccaacgccttcaccccacagactcctcagatg
agggtggtcaacaagtacagctactag
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