Oncorhynchus mykiss (rainbow trout): 110520004
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Entry
110520004 CDS
T07259
Name
(RefSeq) double-stranded RNA-specific editase 1 isoform X1
KO
K13194
double stranded RNA-specific editase B [EC:3.5.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
omy03041
]
110520004
Spliceosome [BR:
omy03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
110520004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
A_deamin
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
110520004
NCBI-ProteinID:
XP_036830106
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All DBs
Position
3:complement(44523710..44718478)
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AA seq
745 aa
AA seq
DB search
MALFSTGPQSLGSYYCLIRRKFKRRRKKRCERKGGAGARQPRQKLFTMDVDEEENMSSSS
TDVKENRNLDNVSSKEGEAVAEHLPNGSGGGSRKRPLEEGNNGHTHSKFRAKKRKKTPGP
VLPKNALMQLNEIKPGLLYKLLSQTGPVHAPVFVMTVEVNGQLFEGSGPTKKKAKLNAAE
KALRSFVQFPNASEAHLAMGRTLTVNTDFTSDQADFPDMLFNGFETPAPPEDSFYLGSNG
SGCLNSLGEYSMPSTPGANLAQALLPPPSAFTSPSSGKNPVMILNELRPGLKYDFLSESG
ESHAKNFVMQVSVDSQQFEGSGRNKKLAKARAAQAALSALFNMQLDQTPSRQPIPREGLQ
LHLPQVLADAVSRLVVDKFSELTDNFTSPHARRKVLAGVVMTTGTDVKEAQVICVSTGTK
CINGEYMSDRGLALNDCHAEIIARRSLIRYLYTQLEHFLSSNKEEQQKSIFTRCDKRGYR
LRDNVLFHLYISTSPCGDARIFSPHEAGMEDQGDRHPNRKARGQLRTKIESGEGTIPVRT
SNTIQTWDGVLQGERLLTMSCSDKIARWNVVGIQGSLMSYFTEPIYFSSIILGSLYHADH
LSRAMYQRIADIEDLPQQFSLNRPLLSGISNAEARQPGKAPNFSVNWAVGDLALEVINAT
TGKDDMGRASRLCKHALYSRWVRLHSKLSSTLRIKVSKPSSYHDAKQAAVEYHNAKQTLI
KVFHKSGLGAWVKKPIEQDQFSLNS
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggccctgttcagcaccgggccccagagcctgggctcctactactgcctcatccgccgg
aagttcaagaggaggcgcaagaaacgctgcgagcgtaaaggtggagccggagctcggcag
ccccggcagaagctcttcaccatggacgtggatgaagaggagaacatgagttcgagcagc
accgacgtaaaggaaaaccgtaacctggacaacgtctcctccaaagagggggaggctgtg
gctgagcatctccccaacggcagtggcgggggcagcaggaagcgccccttagaggaggga
aacaatggccacacgcactccaagttccgggccaagaagcgtaagaaaacgccaggcccg
gttctacccaagaatgcccttatgcagctgaatgaaattaagccggggctgctgtataag
ctgctatctcaaacgggtccagtccacgctcccgtgtttgtcatgaccgtcgaggtcaat
gggcagctgttcgagggctcaggtcccaccaagaagaaggccaagctgaatgcagcagag
aaggcactgcgctcctttgtccagttccccaacgcctccgaagcgcacctggctatgggc
cggacactgacagtcaacacagacttcacatccgaccaggccgacttcccagacatgctc
ttcaacgggtttgagacgcccgcaccgcccgaggactccttttacctgggctccaatggc
agcggctgcctaaactcgctgggagagtactccatgccttccaccccaggtgctaactta
gcccaggccctgttgccccctccctcagccttcacctcgccctcgagcggcaagaaccct
gtcatgatcctcaatgagctgaggccgggcctcaagtatgactttttgtccgagagcggc
gagagccatgcaaagaactttgtcatgcaggtgtcggtggactcacagcagttcgagggc
tctggacgaaacaagaagctggccaaggcccgggccgcccaggcagccctctcagccctc
ttcaacatgcagctggaccagacgccctcccgacagcccatccccagagagggactgcag
ctccacctaccccaggtcctcgccgacgcggtctctcgcctggttgtggacaagttcagc
gagctgacggacaacttcacctccccccacgcgcggcggaaagtcctggcaggggtcgtc
atgacaacaggcacggacgtgaaagaggcccaggtgatctgtgtctccacgggcaccaag
tgcatcaacggcgagtacatgagtgaccgcggcttggcgctcaacgactgccatgcagag
attatcgcccgtcgctcgctcatccggtacctctacacccagctggagcacttcctaagc
agcaacaaggaagagcagcagaagtccatattcacgcgctgtgacaagcgtggctaccgg
ctaagggacaacgttctgttccacctctacatcagcacctcgccctgcggagacgcacgc
atcttctcaccgcacgaggccggcatggaagaccaaggagaccgacaccctaaccggaag
gcgcggggtcagctgaggactaaaatagagtctggggaggggaccattcccgtgaggacc
agcaacaccatccagacatgggacggggtgctgcagggagaaaggctgctcaccatgtcc
tgcagtgacaagatcgcaagatggaacgtggtgggcatccagggctctctgatgagctac
ttcacggagcccatctacttctccagcatcatcctgggcagcctgtaccatgctgaccac
ctctcccgggctatgtaccagcgcatcgccgacatcgaggacctgccccaacagttcagc
ctcaacaggcctctactgagcggcatcagcaacgcggaggcgaggcagccgggcaaggca
cccaatttcagcgtgaactgggcggtgggcgacctggcgctggaggtcatcaatgctacc
acgggcaaagacgacatggggcgcgcctcgcgcctctgcaagcacgccctctacagccgc
tgggttcgcctgcattccaagctgtcatccacactgaggatcaaggtgtccaagcccagc
tcgtaccacgacgccaagcaggcggcggtggaataccacaatgccaagcagactctcatc
aaggtcttccacaagtcgggcctgggggcctgggtgaagaagcccatcgagcaggaccag
ttctccctcaactcctga
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