Oncorhynchus mykiss (rainbow trout): 110520071
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Entry
110520071 CDS
T07259
Name
(RefSeq) fidgetin isoform X1
KO
K26673
fidgetin
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110520071
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110520071
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
110520071
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
110520071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
Vps4_C
AAA_5
AAA_16
AAA_22
TRSP
RuvB_N
TIP49
Motif
Other DBs
NCBI-GeneID:
110520071
NCBI-ProteinID:
XP_021452757
Ensembl:
ENSOMYG00000047568
LinkDB
All DBs
Position
3:complement(48233820..48269471)
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AA seq
751 aa
AA seq
DB search
MITSTGIYGLKMQWTPEHAQWAEQHFDISSTTRSPAHKVEAYRGHLQRTYQYAWANDDIS
ALTASNLLKKYAEKYSGILEGPSERALLCSYSDGTPGLLNGRKSESESWQEGIYPMNCAP
DVLSVSKSGMTAALPPTDVSASIGSTPRGASSLTEPSYSSSNCGSHTATSLHSGLSSQEY
ATGYNGSYLHSSYSGQTASGLPSPLHNAGLLQPPPPPPPPPPTLVPSYNAGSPNLSNYNY
PPTGYPPQTAVAPSYSPGGAPPPSAYLPSGIAAPTPLTPSTLPGYSYQSHNHAPIAPTPL
NGSSANSLKRKAFYMTGHGDMDSSYSNFNYNQQRSSQSPMYRIPDNSISDSSRGNGFDRN
ADPSSLAFKHTKQPISSDQQRKCCSQSGRALTPPSYGSTKSSVGGLRSGESFGKFGTPIM
NEHSEEHRQLLSHSIAGSDIGSATSSSHTAEEQLKNSDANLVELVTTEILQPGPPVDWND
IAGLELAKAAIKEEILWPILRPDMFSGLATLPRSLLLFGPQGTGRTLLGRCMASQLGAAF
LRLSGSALVTKWLGEGEKIVQASFLVARCRQPSVVFISEVDMLLSAQLSEESPVNRIKSE
LLMQLDSVLTSAEDHVLVVCSSSKPEEIQESLRRYFTKRLLIPLPDSTARHQIISQLLSQ
HNYCLSDKELSLLVQRTEGFSGLDVARLCHEAVVGPIHGIPASDLSAIHPSQMRPVSYQD
FDNVFSKFQSNISQKELDTYTEWNKMFGCSQ
NT seq
2256 nt
NT seq
+upstream
nt +downstream
nt
atgatcactagcaccggtatttatggcctaaagatgcagtggaccccagagcatgcacag
tgggccgagcagcactttgatatctcctccaccacacgctctcctgcacacaaagtggag
gcctaccgggggcacctgcagcgcacctatcagtacgcctgggccaacgacgacatctct
gcactcaccgcctccaacctgctgaagaaatacgcagagaagtactctgggattttagag
ggtccgagtgagcgagcgctgctctgctcctattccgatggcactcctggactcctgaat
ggacgtaagtcagagagtgagtcctggcaggaggggatttacccaatgaactgcgctcca
gatgttttatctgtgagcaaatctggaatgacagctgcccttcccccaacagacgtgtcg
gccagcataggtagcaccccaaggggggccagcagcctgaccgagcccagctattccagc
agtaactgtgggagtcacacagccaccagtctacactctggtctgtcctctcaggaatac
gctacgggctacaatggctcctacctgcactctagttacagcgggcagaccgcctcaggc
ctcccctctccattgcacaatgctggtctcctacaacccccgcccccacccccaccacct
ccccctactctagtgcccagctacaacgcggggtctcccaacctctccaactacaattat
cctccgacagggtatcccccacagacagctgttgcccctagctatagccctgggggagcc
ccacctccctctgcctatctgccatcaggcatcgcagctcccacgcccctaaccccctct
acactccctggctatagctaccagtcccataaccatgcaccaattgcaccaacacctttg
aatggcagctcagccaactcattgaaaagaaaagctttctacatgacggggcatggagat
atggactccagctatagtaatttcaactacaaccaacagcgctcctcacaaagccctatg
tacagaataccagacaacagcatctcagactcaagcagagggaatggatttgacaggaat
gctgatccgtcatctttagcatttaagcacacgaagcagccaatatcctcagatcagcaa
agaaaatgttgcagtcagtctggccgagcattaacccctccctcctatggatcaaccaaa
agctctgtgggaggcctgagatcgggcgagtcctttggaaagtttggaacccccataatg
aatgagcacagtgaagagcatagacagctcctctcccattccatagcagggtcggacatt
ggcagcgctacctcatccagccacactgcagaggagcagctgaagaacagtgatgccaac
ctcgtggagttggtcaccacagagatccttcagcccggtcccccagtagactggaatgac
attgcaggtctggagctggccaaagcagccatcaaagaagagattctgtggcccattttg
aggccagacatgttcagtggacttgccacattacctcggagcctccttctcttcggacct
cagggaacaggcagaacactgctgggccgctgcatggccagccagctgggggctgccttc
ctgcggctcagtggctcagccctggtgaccaagtggctgggagagggagagaagattgtc
caggcctccttcctggtagccaggtgtcgccagccctcagtggtgttcatcagtgaggtg
gacatgctgctttcggcccagctcagcgaggagagcccagtgaataggatcaagagcgag
ctcctcatgcagctggacagtgtgctgacctcagccgaggaccacgtcctggtggtctgc
tcctccagcaagcctgaggagatccaagagtccctgaggaggtacttcaccaaacggctt
ctcatccccctacctgacagcacagcacgacaccagataatcagccaactgctctcacag
cacaactattgcctcagtgacaaagagctgtcactgctggtccagcggacggagggcttt
tcaggactggacgtggcccggctgtgccatgaggcagtagtaggaccgatacatggcatc
ccagcttctgacctctcagccatccatcccagccagatgagaccagtctcttaccaagac
tttgacaatgtatttagcaaattccagtccaacatatcacaaaaagaactggacacatac
accgaatggaataaaatgtttggttgcagtcaatga
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integrated database retrieval system