Oncorhynchus mykiss (rainbow trout): 110520078
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Entry
110520078 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Siah1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04115
p53 signaling pathway
omy04120
Ubiquitin mediated proteolysis
omy04137
Mitophagy - animal
omy04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110520078
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
110520078
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
110520078
09143 Cell growth and death
04115 p53 signaling pathway
110520078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110520078
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110520078
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
110520078
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Trm112p
TerY_C
Motif
Other DBs
NCBI-GeneID:
110520078
NCBI-ProteinID:
XP_021452787
Ensembl:
ENSOMYG00000012509
UniProt:
A0A8C7PTL0
LinkDB
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Position
1:27152820..27171343
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AA seq
334 aa
AA seq
DB search
MSGRANVQPVNSWKGVLKLFTCIATRTANNPKEVPTFQEKKKALFGNLMDEEMSRQTATA
LPTGTSKCAPSQRIPTLSGTTASNSDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPK
LTCCPTCRGPLGSIRNLAMEKVANSVLFPCKYASSGCEVTLPHTDKAEHEELCEFRPYSC
PCPGASCKWQGSLDAVMPHLMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFH
FMLVLEKQEKYDGHQQFFAIVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIA
TAIMNSDCLVFDTSIAQLFAENGNLGINVTISMC
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcagagctaatgtgcagcctgtgaactcatggaagggggtgctcaagctcttc
acatgcatagccactagaacagccaacaaccccaaagaggtccccacatttcaagagaag
aagaaagccttatttgggaatcttatggacgaagaaatgagtcgccagaccgccacagcg
ctgccaacaggaacctccaagtgcgccccctcccagcgcatccccaccctgtccggcact
acagcctctaacagcgacctggccagcctgtttgagtgccctgtctgcttcgactatgtg
ctgccccccatcctgcagtgccagagcggccacctggtctgcagcaactgccgtcccaag
ctcacctgctgccccacctgtcggggcccgctgggctccatccggaacctggccatggag
aaggtggccaactctgtgctgttcccctgcaagtatgcatcgtcgggctgcgaggtaacg
ctgccccacacagacaaggcggagcacgaggagctgtgtgagttccggccgtactcctgc
ccttgcccaggggcctcctgtaagtggcagggctcgttggacgcggtaatgccccacctc
atgcaccagcacaaatccatcaccacgctgcagggcgaggacatcgtgttcctggctaca
gacattaacctgcctggagcagtggactgggtcatgatgcagtcctgctttggtttccac
ttcatgctggtcctggagaagcaggagaaatacgacggccaccagcagttctttgccatt
gtgcagctaatcggcacgcggaagcaggcagagaactttgcctaccgcctggagctcaac
gggcaccggcgacggctcacctgggaggccacgccccgttccatccatgagggcattgcc
acagccattatgaacagcgactgcctggtgtttgacacctccatcgcgcagctgttcgct
gagaacgggaacctgggcatcaatgtcaccatatccatgtgctga
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