Oncorhynchus mykiss (rainbow trout): 110520121
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Entry
110520121 CDS
T07259
Name
(RefSeq) acetylcholine receptor subunit alpha isoform X1
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
omy04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
110520121
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
110520121
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
omy04040
]
110520121
Ion channels [BR:
omy04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
110520121
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
110520121
NCBI-ProteinID:
XP_021452871
Ensembl:
ENSOMYG00000022578
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Position
3:complement(49895327..49901575)
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AA seq
457 aa
AA seq
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MNRLLFVSHLLIILTGSAWGSDDETRLVKTLFTGYNKVVRPVAHFKDPVVVTVGLQLIQL
ISVDEVNQIVNSNVRLKQQWKDVNLQWNPEDYGGIKKIRVPSTDIWRPDLVLYNNADGDF
AIVHETKVLLEHTGMITWNPPAIFKSYCEIIVLHFPFDLQNCSMKLGTWTYDGNLVVVNP
DSDRPDLSNFMESGEWVMKDYRSWKHWVYYACCPDTPYLDITYHFLMLRLPLYFIVNVII
PCMLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHTMSPWVRKIFIDTIPNLMFFSTMKRPAKEKQDKN
IYGADFDISDISGKPTPTAVTYQSPITKNPDVRSAIEGVKYIAETMKSDEESNSAAEEWK
FVAMVLDHILLCVFMGVCIIGTLGVFAGRLIELSMTP
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgaatcggctgctttttgtttctcatcttcttatcattcttacaggttctgcctggggc
tctgatgatgagacccgtctggtgaaaaccctgttcactggctacaacaaggtggtgcgt
cctgtcgctcacttcaaggacccagtggtggttacagttggcctgcagctcattcaactc
atcagtgtggatgaggtcaaccagattgttaacagcaatgttcgactgaaacagcaatgg
aaggacgtgaacttgcaatggaatcctgaggattatggtggaatcaaaaagataagagtg
ccctccactgacatttggcgccctgacctcgttctctataacaatgctgatggtgacttt
gccatcgttcacgagaccaaagtgctgctggaacacactggcatgatcacgtggaacccc
cctgccatcttcaagagctactgtgagatcatcgtgctgcacttccccttcgacctgcag
aactgcagcatgaagctgggtacctggacctatgatggcaacttggttgtcgtcaatccc
gacagcgatcgtcctgacctgagtaacttcatggagagtggagagtgggtgatgaaggac
taccgcagctggaaacactgggtgtactatgcctgctgcccagacacgccctacttggac
atcacctaccacttcctgatgctgcggctgcccctctacttcatcgtcaacgtcatcatc
ccctgcatgctcttctcattcctcactggcctcgtcttctatctgcccactgactctggt
gagaagatgactctgagtatctctgtcctgctgtctctgactgtgttcctgctggtcatc
gttgagctcatcccctccacatccagtgctgtgccgctcatcgggaagtacatgctcttc
accatggttttcgtcattgcctccatcatcatcactgtcatcgtcatcaacacccaccac
cgttcccccagcactcacaccatgtccccctgggttcgcaagattttcattgacaccatt
cccaacctcatgtttttctcaacaatgaaacgtccggcaaaggagaaacaggataaaaac
atctatggtgctgactttgacatctcagacatctcaggcaagcccacccctactgcagtc
acctaccagtcccccatcaccaagaaccccgacgtacgcagtgctattgagggggtgaag
tacatcgctgagaccatgaaatctgatgaggagtccaacagtgctgctgaagagtggaag
tttgtggccatggtgctggatcacattctgctgtgtgtgttcatgggggtgtgtatcatt
ggcacactgggggtgttcgcaggccgtctcattgagctgagcatgacgccctag
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