Oncorhynchus mykiss (rainbow trout): 110520232
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Entry
110520232 CDS
T07259
Name
(RefSeq) ras-related protein Rab-5B
KO
K07888
Ras-related protein Rab-5B
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04137
Mitophagy - animal
omy04144
Endocytosis
omy04145
Phagosome
omy04148
Efferocytosis
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110520232
04145 Phagosome
110520232
04137 Mitophagy - animal
110520232
04148 Efferocytosis
110520232
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110520232
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520232
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110520232
04031 GTP-binding proteins [BR:
omy04031
]
110520232
Membrane trafficking [BR:
omy04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
110520232
Endosome - Lysosome transport
110520232
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
110520232
Exosomal proteins of other body fluids (saliva and urine)
110520232
Exosomal proteins of colorectal cancer cells
110520232
Exosomal proteins of melanoma cells
110520232
GTP-binding proteins [BR:
omy04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
110520232
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SDR-like
AAA_16
Motif
Other DBs
NCBI-GeneID:
110520232
NCBI-ProteinID:
XP_021453074
Ensembl:
ENSOMYG00000016734
UniProt:
A0A060XBS8
LinkDB
All DBs
Position
3:complement(55375915..55382161)
Genome browser
AA seq
218 aa
AA seq
DB search
MATRGSGRPNGTLPQTKICQFKLVLLGDMAVGKSSLVLRFVKGQFDEFQETTIGAAFLAQ
SVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVFDITKPETFERAKAWVKELQR
QASPNIVIALAGNKADLAEKRLVEYEEAQTYSEDTGLLFMETSAKTAMNVNELFLAIAKK
MPKTDTQNPTHAARHRGVNLQDPEAHNTRSCCGGGGGN
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggctaccagagggagtggccggcccaatggcacgctgccccagaccaagatatgccag
tttaaactggtcctactgggagacatggcagtgggaaagtccagcctagttctgcgcttc
gtcaagggacagtttgatgagttccaggagaccaccatcggagctgcgttcctggcccag
tctgtgtgtctagatgacactaccgtgaagtttgagatctgggacacagcgggacaggag
cgctaccacagtctggctcccatgtactaccgcggggcacaggctgccatcgtggtcttt
gacatcaccaagccggagacgtttgagcgggctaaagcctgggtgaaggagctacagagg
caggctagccccaacattgtcatcgctctggcaggcaacaaggcggacctggctgagaag
agactagtggagtatgaggaggcccagacctattctgaagacactggacttctcttcatg
gagacctctgccaagactgccatgaatgtcaacgaacttttcctggccattgccaaaaag
atgcccaaaacggacacccagaatcctacacacgcagcgcgacacaggggagtgaactta
caggatcctgaagcccacaacacccgatcctgctgtggaggaggaggagggaactag
DBGET
integrated database retrieval system