Oncorhynchus mykiss (rainbow trout): 110520308
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Entry
110520308 CDS
T07259
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
110520308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110520308
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
110520308
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NUDIX_2
Motif
Other DBs
NCBI-GeneID:
110520308
NCBI-ProteinID:
XP_021453211
Ensembl:
ENSOMYG00000014036
UniProt:
A0A060Y2Z5
LinkDB
All DBs
Position
1:27834798..27840257
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AA seq
229 aa
AA seq
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MSVVPPNRPSTGWPRRGLNQFENKYISPPSKPVTLERAINLYPLTNYTFGTKEPLYEKDS
SVAARFQRMREEFEKVGMRRAVEGVLIVHEHRLPHVLLLQLGTTFFKLPGGELNAGEDEV
DGLKRLMTEILGRQDGVKQDWVIDDSIGNWWRPNFEPPQYPYIPAHITKPKEHKKLFLVQ
LQEKALFAVPKNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgtcggttgtacctcccaaccgaccttcaaccggttggccacgccgtggactgaaccag
ttcgaaaataaatacatcagcccgccttccaaacctgtcacgctggagagagccatcaac
ttatatcccctcacgaattacacgtttggcacaaaggaacctctctacgagaaggatagc
tcggtagcggctcggttccagaggatgcgcgaggagttcgaaaaagtaggcatgaggcgg
gcagtggagggtgttctgatcgtacacgagcacaggctaccacacgttctactgctgcag
ttggggacaacctttttcaaacttcctggtggagaattgaatgcaggggaggacgaagtg
gatggactgaagcgattgatgacagagatcctggggcgtcaggatggagtgaagcaggac
tgggtgatcgatgactctattggaaactggtggagacccaactttgagcccccacagtac
ccctacatcccagcacacattaccaaacccaaagagcacaagaagctctttttggttcag
ttgcaggaaaaagcactgtttgcagtgcccaagaactataagctggtggctgcccctctc
tttgagctgtatgacaatgccccaggctacgggccaatcatatccagtctcccacaactg
ctgagtaggttcaacttcatatacaattaa
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