KEGG   Oncorhynchus mykiss (rainbow trout): 110520316
Entry
110520316         CDS       T07259                                 
Name
(RefSeq) integrin alpha-4
  KO
K06483  integrin alpha 4
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04510  Focal adhesion
omy04512  ECM-receptor interaction
omy04514  Cell adhesion molecules
omy04672  Intestinal immune network for IgA production
omy04810  Regulation of actin cytoskeleton
omy04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    110520316
   04514 Cell adhesion molecules
    110520316
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    110520316
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    110520316
   04810 Regulation of actin cytoskeleton
    110520316
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    110520316
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:omy04147]
    110520316
   04515 Cell adhesion molecules [BR:omy04515]
    110520316
   04090 CD molecules [BR:omy04090]
    110520316
Exosome [BR:omy04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   110520316
  Exosomal proteins of other cancer cells
   110520316
Cell adhesion molecules [BR:omy04515]
 Integrins
  Integrin alpha subunits
   110520316
CD molecules [BR:omy04090]
 Proteins
  110520316
SSDB
Motif
Pfam: Integrin_A_Ig_1 FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_3 FG-GAP_3 DUF5370 DUF6479
Other DBs
NCBI-GeneID: 110520316
NCBI-ProteinID: XP_036830719
Ensembl: ENSOMYG00000032923
LinkDB
Position
3:61475876..61505428
AA seq 1023 aa
MERKTPGNLSCCWSFLLAYFWCCNLTECYNLDVDHPISFSGPNGSLFGYSVLLHKNQKNT
WLLVGAPVANSSSYPAVKKPGAIYKCSISDKRECQQISTGVDSCGKTCFSESDNQWLGVS
LSRQPRDGHVLACGHRWKNVFYSRKENQNKLPHGVCYRYEADLKQSQPLIPCYKDHQRKF
GEDYGSCQAGISNFLTEDLIIMGAPGTSYWTGSVLVYNTSSRVLSAYVDDSSTVLYGSYL
GYSVGAGHFLHPDSTEIVGGAPQHGQTGKAYLFRAEENMLKIISEVKGSKLGSYFGASVC
AVDLNGDGLSDLLVGSPMYSTVREEGQVHVYINQGAANMKEAEFQLVGSNSYAARFGETI
TDLGDIDDDGFADVAVGAPQEEELRGAIYIYNGRKTGISQTFSQRITGSVLGNELKMFGQ
SVSGGIDVDENGYQDVAVGAFLSDSAVVLRTRPVIVVEAFMPLPVSVDRYVALCSDNGLP
AVCINATVCFRVHARHFTSSIVLQYNLTADTQHKESFPSRFHFHGNGTSNATTGRVKTRH
DQLTCVPHQAFIRKDVRDIFTPIHFEVSYTLKEHTVHNGGSTFPALKPILQQRGGHGNLV
ANKTEFARYCSLANCSTNLQVSAQLVLPQRHNNMPYFALGNGKTIMLNTTLVNTGDDAFL
PRLQLRFPSNLHYIKVLDAEEKFVSCDISEENKTIVGVDCSVGNLYLSSGAKVNISFLLD
VNQSSSVGDVSISINASGDNYENEDLLHDNSATLMLPLRYGVHVNIHGFMTPTSFVFGDQ
APIPVDCYTETFNYTYKVVNIGPSKSLNTIVEIDIPKILSPYPYRLLHVTDFHTSLGECS
IRNDSIAVEDACEVPQSSFIKELVFFFSKNSKRKMFCAYGDDLCLTLECRLGDMDIGKEA
TIHMEVKLNPTVLQLSPGRHGVMLMESTGIITSPREDPQTIILQKIPIAQVVLEAHFSQK
PQAAVEVFIIVVSLVVGLLILALLIFALWKIGFFKRQFKKEDEIRRDSWDYVPKHLTKTE
SRS
NT seq 3072 nt   +upstreamnt  +downstreamnt
atggagcgaaaaacgccgggcaatctttcttgctgttggagctttcttctcgcgtacttc
tggtgctgtaatctcaccgagtgttacaatttggatgtagaccacccgattagtttcagt
ggaccaaatggatctttatttggatattctgtattgttacacaagaaccagaaaaacaca
tggttattagtcggagctccagttgcgaattcatcttcctacccagccgtaaaaaaacca
ggagcaatttataagtgcagcatctcggacaagagagaatgtcaacaaatatcaacaggt
gtggacagttgtgggaagacatgcttctctgagagtgacaaccagtggctcggagtcagc
ctgtccagacagcctcgtgatggccatgtattggcatgtgggcatcgttggaagaacgtg
ttctattccaggaaagaaaaccagaacaagctgcctcatggtgtctgttacagatacgag
gctgacctcaaacagtctcaaccactcatcccatgctacaaagatcaccaacggaagttt
ggtgaggactatggatcatgccaagcagggatatccaactttctgactgaggacttgata
attatgggagccccagggacatcgtactggactggatctgtcctggtctacaacacctcc
agcagggtcctgtctgcctatgtggatgacagcagcactgtcctctatggcagttacctg
ggctactcggttggggccggccacttcctccaccctgactccacagagattgttggcggt
gcgccccagcacgggcagactggtaaggcctacctattcagagctgaagaaaacatgctg
aagataatcagtgaagtcaagggcagcaagctcggctcgtattttggtgccagtgtgtgt
gctgtggacctgaatggagatggcctgtctgatctactggtaggatctcccatgtacagc
acagtgagagaggaaggacaagtccatgtctacataaaccaaggagccgctaatatgaag
gaagcagagtttcagttggtgggaagcaactcgtatgctgccagatttggggagaccata
actgatctgggagatattgatgatgatggctttgctgatgtggcagtgggggctccgcag
gaagaagagctgcgtggggctatatatatctacaatgggaggaaaacagggatctctcag
accttctctcaaaggatcactggctctgttctgggtaatgagttaaagatgttcggccag
tctgtgtcaggaggcatcgatgttgatgaaaacggttaccaagatgtagcagtaggggcc
ttcctctcagactcagctgttgttctgaggactcgtccagtaatagtggtagaagccttc
atgcccctgcctgtcagtgtagaccgctatgtagcactgtgttctgacaacggtcttcct
gctgtctgcatcaatgctacagtctgcttcagggtccatgctcgacacttcacctcttca
atagtgctccagtataatctgacagcagacacgcagcacaaggagtccttcccctcacgt
ttccatttccacggaaacgggacgtccaacgctacaacagggcgggtcaagaccagacac
gaccagctgacctgcgtcccccaccaggccttcataaggaaagatgtccgagatatcttc
acacccatccattttgaggtttcgtacaccctcaaagagcacactgtccataacggagga
tccactttccctgctctgaaacccatactgcagcagagaggggggcacggtaacctggtg
gccaataagacagagtttgctcggtactgttcattggccaactgctcaaccaatctacag
gtctctgctcaactggtgttaccacagagacacaacaacatgccgtactttgcacttggc
aatgggaagaccatcatgttgaacacaaccctggtgaacacgggagatgatgcattcctc
cccagactccagctccgattccccagtaacctgcactacatcaaagtgcttgatgcagag
gagaagtttgtgagctgtgacatttcagaggagaacaagacaatagtaggagtggattgc
agtgtgggaaacctatacctcagctctggggccaaggtcaatatcagttttctgttggat
gtgaaccagagtagtagtgttggtgacgttagcatctccatcaacgctagtggggacaat
tatgaaaacgaggatcttctgcatgacaactctgccactctgatgttaccactgagatat
ggagtacatgtcaacattcatgggtttatgactccaacatcctttgtatttggtgaccag
gcacctattccagttgattgctacacagagacattcaactacacttacaaggttgtcaat
attggtccaagcaaatctctcaacacgatagtggagattgatattcccaagatcctgtca
ccatatccatacagattactccacgtcacagacttccatacgtctcttggagaatgctcc
attcgaaacgactccattgcggtggaggatgcctgtgaggtgccacaatcctctttcatc
aaagaactggtcttcttcttctccaaaaacagcaaacgcaaaatgttctgtgcctatggt
gatgacctgtgcctgactctggagtgtagactaggagatatggacattgggaaagaagcc
accattcacatggaagtgaagttgaatcccaccgttctacagctctcacctggacgtcat
ggagtgatgctgatggagagtactggcatcatcacatcaccaagggaggaccctcaaacc
atcatcctacagaagatccctatcgctcaggttgtgttggaggcccacttcagccagaag
cctcaggcagcagtggaggtgtttatcattgtagtgagtctagtggtgggactcctgatc
ctggccctgctcatcttcgccctctggaagattggtttctttaaaaggcagtttaagaag
gaggatgagatcaggagggatagctgggactatgtaccaaaacatttgactaagactgag
agtagatcctaa

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