Oncorhynchus mykiss (rainbow trout): 110520344
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Entry
110520344 CDS
T07259
Name
(RefSeq) succinate--CoA ligase [ADP-forming] subunit beta, mitochondrial
KO
K01900
succinyl-CoA synthetase beta subunit [EC:
6.2.1.4
6.2.1.5
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy00020
Citrate cycle (TCA cycle)
omy00640
Propanoate metabolism
omy01100
Metabolic pathways
omy01200
Carbon metabolism
Module
omy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
omy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
110520344
00640 Propanoate metabolism
110520344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
omy04147
]
110520344
Enzymes [BR:
omy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.4 succinate---CoA ligase (GDP-forming)
110520344
6.2.1.5 succinate---CoA ligase (ADP-forming)
110520344
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
110520344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-grasp_2
Ligase_CoA
Citrate_synth_N
ATP-grasp_5
GARS_A
CPSase_L_D2
Motif
Other DBs
NCBI-GeneID:
110520344
NCBI-ProteinID:
XP_021453275
Ensembl:
ENSOMYG00000005173
LinkDB
All DBs
Position
3:62254960..62272829
Genome browser
AA seq
463 aa
AA seq
DB search
MAASLICGRFSASLRNSGARSTLTTASKVLGGSSGLLGPQQQSPHLQQQQRNLSLHEYMS
IGLLKEAGVCVPEGKVASSPDEAYSVAKEIGTKDLVVKAQVLAGGRGKGTFEGGLKGGVK
IVYSPEEARDISSQMIGRKLYTKQTGEQGRICNQVFICERRYPRREYYFAITMERSFQGP
VLIGSSQGGVNIEDVAAENPDAIVKEPIDIMDGIKMEQAVSIATKMGFPAALIGDAAANI
IKLYNVFMKYDASMLEINPMVEDASGQVMCMDAKINFDSNAAYRQKKVFDMQDWTQEDAR
DRQAAKADLNYIGLDGSIGCLVNGAGLAMATMDIIKLHGGTPANFLDVGGGATAHQVMEA
FKLITSDRKVQAILVNIFGGIMRCDIIAQGIIMAVTDLDLKIPIVVRLQGSRVDDAKALI
AASPLKLLACDDLDEAARMVVKLSEIVSLAQEAHVDISFQLPL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgtccctgatttgtggccgattttcggctagcctgagaaattctggggccaga
tcgacacttaccactgcatccaaggtgctgggtggttcctctggcctgcttgggcctcag
cagcagtccccccacctgcagcagcagcagaggaacctctccctgcacgagtacatgagc
atcggtctgctcaaagaggctggcgtctgtgtgcccgagggcaaggtggccagctcaccc
gatgaggcctactctgttgccaaggagattggcaccaaggatctggtggtgaaggcccag
gtgttggctggaggccgaggcaaaggcacattcgaaggagggctgaagggaggagtgaag
attgtttactcgccagaggaggcccgggacatctcctctcagatgattggtcgtaagctg
tacaccaagcagacaggcgagcagggccgtatctgtaaccaggtgtttatctgtgagcgc
aggtacccccgcagggagtactacttcgccatcaccatggagagatccttccagggccct
gtgttgattggcagctctcaggggggtgtgaacattgaggatgtggcggcggagaatccc
gacgccattgtgaaggagccaatcgacatcatggatggaatcaagatggaacaggcggtt
tcgattgccacgaagatgggcttccctgctgctctgatcggcgacgcagcggctaacata
atcaagctgtacaacgtcttcatgaagtacgatgcctccatgctagagatcaaccccatg
gtggaggacgcctctggccaggtgatgtgcatggacgccaagataaactttgactccaac
gcggcgtatcgccagaagaaggtgtttgacatgcaggactggacccaggaggatgccagg
gaccgacaggcagccaaggctgacctcaactacatcggcctggatggatccatcggctgt
ctggtaaatggggctggtctagccatggccaccatggacatcatcaagctgcatggtggc
actcctgccaacttcctggatgtggggggcggagctacagcccaccaggtgatggaggcc
ttcaaacttatcacctccgacaggaaggtgcaggccatcctggtgaacatcttcggtggc
atcatgaggtgtgacatcattgctcagggcatcatcatggctgttacagacttggacctg
aagatccccattgtggtacggttacaaggatccagagtggacgatgccaaagctttgatc
gctgctagcccactgaagctcctggcctgtgacgatctggacgaggctgctagaatggtt
gtaaagctttctgagattgtgtcgttggctcaggaggctcatgtggacatctccttccag
ctgccactctaa
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