Oncorhynchus mykiss (rainbow trout): 110520377
Help
Entry
110520377 CDS
T07259
Name
(RefSeq) GRIP and coiled-coil domain-containing protein 2 isoform X1
KO
K20282
GRIP and coiled-coil domain-containing protein 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
110520377
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520377
Membrane trafficking [BR:
omy04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
110520377
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rab_bind
GRIP
APG6_N
Motif
Other DBs
NCBI-GeneID:
110520377
NCBI-ProteinID:
XP_021453329
Ensembl:
ENSOMYG00000011068
UniProt:
A0A8C7PLC1
LinkDB
All DBs
Position
3:complement(63780997..63822595)
Genome browser
AA seq
1584 aa
AA seq
DB search
MEQDTSPESVTSPPPGAAAKSKLDTLSKDDLIKFAKKQMAAIQKMKSKCAVLEKEVDTLK
SQPKGNSGDSIIQELTERMSALLLEKAETQQSAVLLRKENEKVKHREQDAVEKLATLLGE
LDQAKEDHQKKIAALEKSLDSSQAKHKEEVEFFQRLLRKKEENDREKESEREKEKQRERE
HTNQSVEAVSCSLESQILSLQTELAAALERSTQVASALQEDHQRALTEAQQEVENLREEL
AQHSVQHEEELRALEEDFEMEKERLLLLQEELSEQLALKDSFLQDVQEGEEEPSGRSSGI
ARMLELSGLSLIDASDGETESGQLRSALEDQQSQNTMLQDELTFLGNVKTKLEAELERVR
EEFHTEKEELQFKIEELLMTREVATPNRDLQEAQAFTQLQQSGPQRDSVDGLPASPASPS
SLRQSLSCPVPGAAHQSLTLQEQQGQAQELRSQCEYLDRSQAVAEYEHTRDILRGLETEL
GQRTGDVTRQYEAMKEHAASAVQELQESVRRLTEERDGLVERVKGFDEDRDSLLEKVQGL
EKRLESFLKQTQAAEGLKEQLQTSMEEKTALALKLKNSVEAQTVLASELKASLEVQTVLA
VELRASVEDLSKQNGEILSQLQMKESAVQELEETVDVVSTERDRTLSALQDREMEVMRLW
EEREREVEESQGQREEVVELQARIEELEKERSLLKSNLEVVQRESSKNVQGSPGEEVEEL
QARIDELEKERSLLKSNLGEVVGDTEALQKDLREMKLANEKMRTENQELLTQVSQATETL
VDREREEKEGRETEREEEEEQAKKERRELQQQLTEKDTVISQLRSEMAGLLSSAPSPVSE
ENTANEFTEKIALLEKESKEKDERMNKIKAVAVKARKELDTSRKEAVSLKEEVEVLKAER
ERVTSSMKDIIHGAEGYKNLQLDYDRQTEQLDKERETVEGAEKQISELTKRLNNAVQQHE
QLWSEREDLMTELETLRNTVRQMEGQTAELHRQTDTLNRDLQAERLLKEQKTKELSSLQK
EVEELTVQLRRQKQQSQQTTQELEQLRKEAQQSSLLDMEMADYERLVKELNTKLSEKDVC
VEELKTQIHTHTQKEDTLNQEIEVLKSQMDQGEDKSSKMKQLLVKTKKDLADAKRQEAIQ
MMTLASLKGELEAHQQQLENNKIQCCDLTAERHRLQEQLRTLTEQQQRTSSSLQQRLTTL
QQEANTAKAELSSVTAEFDSYKVRVHNVLKQQKNKTSAQSDGDATKQEREQTESLVDQYK
AKLQDSQQSLAVSTAELQQLQMEHDTLLERHNKILQETVAKEAELRERFMSLQAEIMSLR
TEHAQTVGQLTSQAVAQRSGFREQIRHLQDEHRTTVETLQNQMTRLENQLFTLQKQTSPA
PVQTSRKSAVDRRPVDQGGTGGLGLGDLQSMAREEGEGMETSETESLSSTYLPSLEQLLT
SPDPKQEPFVWQVEPTKEELNQKLTTATRSMEHMNSLLHETEATNAVLMEQVNLLKSEVR
RLERNHEREKSVANLEYLKNVLLQFIFLQSGSERQALLPVIHTMLQLSPEEKNKLAAIAM
GEEEVGGARGSGWTSYLHSWSGIR
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atggagcaggacaccagcccagagtctgtgacctcacctcctccaggtgccgccgctaag
tcaaagttggacacgttgtccaaagatgacctcatcaagtttgccaagaagcagatggct
gccatacagaagatgaagtccaaatgtgcagttttggaaaaggaggttgatactctcaag
tctcagccaaaaggcaattcaggtgactccatcatacaggaactgaccgagaggatgagt
gccttgttgctggaaaaggctgagacccagcagagtgcggtgttgctgcggaaggagaat
gagaaggtcaagcaccgggaacaggatgcagtagagaaactggccaccctgctgggagag
ttggaccaggccaaggaagaccaccagaagaaaattgcagccttggagaagagcttagac
tcatcccaagccaaacacaaagaagaagttgaatttttccagaggcttctgaggaagaaa
gaagagaatgacagagagaaagagagcgaaagagagaaagaaaagcagagagaaagggaa
cacacaaaccagagtgtagaagccgttagctgcagcctggagtcacagatcctgagtctg
cagacagagctagctgcagccttggagcgaagcacccaggtggcttcagcgctgcaagaa
gaccaccagagggcgctgacagaggcccagcaggaagtagagaacctgagagaggagttg
gctcagcatagtgtgcaacatgaagaggagctgagagctctggaagaggactttgagatg
gagaaagagagactgctactcctccaagaggagctcagtgagcagctggctctcaaagac
agcttcctgcaagatgtgcaggaaggtgaggaggagcctagcggccgcagctcaggaata
gccaggatgttggagctgtctggtttaagtctgattgatgccagtgatggagagacagag
agcggacagctacgatctgccctggaggaccagcaatcccagaataccatgctgcaagac
gagctgaccttcctggggaatgtaaagactaaactggaggcggagcttgagagggtgagg
gaggagtttcatacagagaaggaggaactacagtttaaaatcgaagagttgctgatgacc
cgggaggttgcgacccctaaccgtgaccttcaggaggctcaagctttcactcagctccag
cagagcggcccacagagagattcagtggacggcctacctgccagtcctgctagcccttcc
agcctcagacagagcctgtcctgccctgtccctggtgcagcccaccagagcctgaccctg
caagaacagcagggtcaggctcaggagctgaggtcccagtgtgagtacctagacaggagc
caggcggtggctgagtacgaacacaccagagacatcctgagaggcctggagactgagcta
ggtcagaggaccggggacgtcaccagacagtatgaagctatgaaggaacatgcggcttct
gcagtccaggagctacaggagagcgtcagaaggcttactgaggagcgagatggtctggtg
gagagggtgaaagggttcgatgaagacagagacagcctgttggaaaaggtccagggcctg
gagaagaggctggagagcttcctaaagcagacacaggcagccgaggggctgaaagagcag
ctgcagacgtctatggaggagaagactgcgttagccctcaagctaaagaactcagtagag
gcgcagacagtgttagcgtctgagctaaaagcatctcttgaggtgcagacagtgttagct
gtagagctaagggcttcagtggaggatctgagcaagcagaacggggagatcctctctcag
ctacagatgaaggagagtgctgttcaggagttagaggaaacagtcgatgtggtgagcaca
gagagagacagaacactgtcagcactgcaggacagagagatggaggtgatgaggctgtgg
gaggaaagagagagggaggtggaggagagtcaaggccaaagagaggaggtggttgagcta
caggctcgtatagaggagttagagaaggagaggagcctgctgaagagtaatctagaggtg
gtgcagagggagagttctaagaatgtgcaggggagcccaggggaggaggtggaggagcta
caggctcgtatagacgagctggagaaggagaggagcctgctgaagagtaatctgggggag
gtggtgggagatactgaagctctacagaaagacctaagagagatgaaactggccaatgag
aagatgagaacagagaaccaagaactactgacacaggtcagccaggctacagagacactg
gtagacagagagagggaggaaaaggaggggagagagacggagagagaggaggaggaagaa
caggcgaagaaggagaggagagagctacaacagcagctaacagagaaggacacagtgata
tctcagctgagaagtgagatggctggcttactctcttcagccccgtctcctgtctcagag
gagaacacagccaatgagttcactgagaaaatcgccctgctggagaaggaaagcaaagag
aaggatgagaggatgaataagatcaaggcggtggctgtgaaagccaggaaggagctggac
accagcaggaaagaggctgtgtcgctgaaggaggaagtggaggtgttgaaggctgagaga
gagagagtgaccagctcaatgaaagacatcatccatggagcagagggatacaagaacttg
cagctggactacgacaggcagacagagcagctggataaggagagagagacggtggaggga
gctgagaaacagatctctgagctgaccaaacgactaaacaacgcagtacaacagcatgaa
cagctgtggtcggagagagaggacctgatgaccgaattggagactctgaggaatacggtg
agacagatggaaggacagacagcagaactacacagacagacagacaccctgaacagagac
ctgcaggctgagcgactactgaaggaacagaagacaaaggagctgtcatcgttgcagaag
gaggtggaggagttgacagttcagctccgcagacagaagcagcagtctcagcagacaaca
caggagctggagcagctacgcaaggaggcccagcagagctcgttgttggacatggagatg
gcagactatgaacgcctggtcaaagaactcaacaccaaactgtcagagaaggacgtgtgt
gtggaggagctgaaaacacagatacacacacacacacagaaagaagacacactcaaccag
gagatcgaggttctgaagtcccagatggaccagggggaggataagagctccaagatgaaa
cagctgctggtgaaaaccaagaaagacctggctgatgccaagagacaggaagccattcag
atgatgacgctggcctctctgaagggagagctggaggcacatcaacagcaactagagaac
aacaagatccagtgctgtgacctgactgcggagcgccacagactacaggagcagctgagg
actctgactgaacaacagcagagaacaagcagctccctgcaacagagactgaccacacta
cagcaggaggctaacactgccaaggctgagctgtcatctgtcactgctgagtttgacagc
tataaggtcagagttcacaacgtcctcaaacaacagaagaacaaaacctcagcacagagc
gatggagacgccactaaacaggagagagagcagacggagtccttggtggaccagtataaa
gccaagctgcaggacagtcagcagagtctggcggtgagcactgcagaactacaacagctc
cagatggaacatgacacactgctggaacgacacaacaagatactgcaggagaccgttgct
aaagaggccgagctcagagagagattcatgtctctccaggctgagattatgtcactgcga
acagagcatgctcagacggtgggtcagctgacctcgcaggccgtggcccagcgctccggg
ttcagggagcagatccgccaccttcaggatgaacacagaactacagtagagaccctgcag
aaccagatgaccaggctggagaaccaactgtttacactgcagaaacagaccagtccagct
ccagtccagaccagtcgtaagtcagcggtggaccgccggcccgtggaccaggggggaacg
ggggggctgggcctcggtgatctccagtccatggctagagaggagggggagggcatggag
acctccgagacagagtccctgtcatccacatacctaccctcactggagcaactactcacc
tccccagaccccaaacaggagccgtttgtgtggcaggtggagccgactaaagaggagttg
aatcagaagttgaccacagctacacgcagtatggaacacatgaacagtctactgcatgag
accgaagctactaacgctgttctgatggaacaggttaatctgttgaagtctgaagtgcgt
cgtctggagcgtaaccatgagagagagaagagtgtagccaacctggagtatctgaagaat
gtccttttacagttcatcttcctgcagtcaggcagcgagagacaggctctactccctgtc
atacacaccatgttacaactcagccctgaggagaagaataaactggctgctatcgcaatg
ggtgaggaggaggtgggaggagctagaggctcaggatggacctcctacctacacagttgg
tcaggcatcagatga
DBGET
integrated database retrieval system
