Oncorhynchus mykiss (rainbow trout): 110520414
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Entry
110520414 CDS
T07259
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha
KO
K06093
partitioning defective protein 6
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04144
Endocytosis
omy04517
IgSF CAM signaling
omy04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
110520414 (pard6a)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
110520414 (pard6a)
09144 Cellular community - eukaryotes
04530 Tight junction
110520414 (pard6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110520414 (pard6a)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
110520414 (pard6a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PB1
PDZ_6
L51_S25_CI-B8
Motif
Other DBs
NCBI-GeneID:
110520414
NCBI-ProteinID:
XP_021453400
Ensembl:
ENSOMYG00000017293
UniProt:
A0A8K9XYE5
LinkDB
All DBs
Position
1:28242570..28288088
Genome browser
AA seq
405 aa
AA seq
DB search
MVQSTGVQRAKMSRHQRTPLKNTNNVVEVKSKFEAEYRRFALKKSGTGGFQEFYRLLQTV
HRIPSVEVLLGYADIYGDLLPINNDDNFYKALSSANPLLRIIIQKRDVDEPVVFATNSLQ
RRKKGLAGLRPAQQKTKPGLMIGHPQDFRQISSIIDVDILPETHRRVRLHKHGTHKPLGF
YIRDGVSVRVTPQGVEKVPGVFISRLVRGGLAESTGLLGVNDEILEVNGIDVDSKSLDQV
TDMMVANSHNLIVTVKPANQRNNVVLRGSKVSVGGNSSSGSIGSTISHDLAPSPASQSVS
HYSNSNSVAEGDSDEDGDIIIESDILPYLPDHCVSNGNGSHREFPLSSSLGQRPLPQSIF
LPSSGSLSDSKASLNSLTTPTHNGSPTKTSSSQESMREDGNIITM
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atggttcaatccaccggggttcaacgcgcaaaaatgtcaaggcatcagaggaccccattg
aaaaacacgaacaatgtggtcgaggtcaaaagcaaatttgaggcggagtacaggcgtttc
gctctgaagaagagcggcaccggtggctttcaggagttctaccgactgctgcagactgtt
caccgcatccccagtgtggaggtgctgctgggatatgcggacatctatggtgacctgctg
ccaatcaacaacgatgacaacttctacaaggccctgtcctcagccaatccactactcagg
atcatcatccagaagagagatgtggatgagcctgtggtctttgccaccaactccctgcag
aggaggaaaaagggtctggcagggttgcgcccggcacagcagaaaaccaaaccaggactg
atgattggccatccccaggacttccggcagatctcctccatcatcgatgtcgacatcctg
cccgagacacaccggcgcgtccgcctgcacaagcacggtacccacaagcccctgggtttc
tatatccgggacggggtgagcgtgcgggtcacgcctcagggagtggagaaggtgcctggt
gtctttatctcccggctggtacgtggaggcctggctgagagcacaggcctgctgggggtt
aacgatgagatcctggaggtcaacggcattgatgtggacagcaagtctctggaccaggtg
acagacatgatggtggccaacagccacaacctgatcgtgacggtgaagccagccaaccag
cgcaataacgtggttcttcgaggaagcaaggtctcggtaggggggaacagctcctctgga
tccataggctccaccatctcccatgacttggcccccagccccgcctctcaaagtgtcagt
cactatagcaacagtaacagtgtggcggagggcgacagcgacgaggatggagacattatc
attgagagtgacatcctgccatacctgcccgaccactgtgtgtccaatggtaatggcagc
cacagggagtttccattgtcttcgtcactggggcaacggcccctcccccagagcattttc
ctgcccagtagtggttctctgtcagacagcaaggcctctctgaactccctgaccactcct
actcacaacggcagccccaccaagaccagcagcagccaggagagcatgagagaggatggg
aacatcatcacaatgtaa
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