Oncorhynchus mykiss (rainbow trout): 110520429
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Entry
110520429 CDS
T07259
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
omy03019
]
110520429
Messenger RNA biogenesis [BR:
omy03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
110520429
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
Motif
Other DBs
NCBI-GeneID:
110520429
NCBI-ProteinID:
XP_021453415
Ensembl:
ENSOMYG00000013815
UniProt:
A0A8C7Q181
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Position
3:complement(66268185..66295887)
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AA seq
874 aa
AA seq
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MGLKDHLEDETGHILNLGLDLDYLHVEGTDRQASLSATVGTHSGALERDETEVGGTHSSV
SSSSISSSSCCSNSSEESAASDSEDERGVQHGSGSDAQTTHPLPCHPAGQGPAQSPQSRD
PKHSTNPFTEYRSKLEFALKLGYSEELVLLVVRKLGPDALINDILGELVKLGTKSETDQA
GGSATSHSPSSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSC
HGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRHLEKDKILVFTPSRRVQ
GRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYTFVNDKFMPP
DDPLGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADEL
RAKNFSSSSTSSSKMVGEALMVKSHSMSSSSRVDGIPDPHQAPPKRQSDPSLCAPSYNDL
LEERLGRRTKTEARRGSSSSSSSSSSSLLASAPGGPPSSHGFSLQDWGNTSSRAPGLSAL
GHSKSYSTCESPELSYHSLMGAYSSLSLVVPRSPDRLFPADLRTGSMVSDCSSEGSVSSD
SFSPDPLLDDSLKCHYPHPHHHHHHCPSCYPHHPNHPPPGLTQHPHGGSHHGYPLAQSSL
EDPPSSLHHFKAQLSYLPPHIQQPSVGSHSGCSGNYPPQPLSQTSSPHSHSHSSPLGHNL
GGSTWQDNNSLYKQSPVHPRRIYPGPGQEQRLARWDPHYKHLPQACYEPFTFQSLPEGRK
QPWHSPWPRGTHSPHPQSLSSSHLPPLTHHSTAPQHQEPPALGRYQDVRENVFVNLCNIF
PPELVRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgaaacaggccacatcctcaacctggggctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagttggc
acccactcaggagccttggagagggacgagacggaggtaggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagttgttgtagtaactcctctgaagagagtgctgcg
tcagacagcgaggatgagcgaggggtccaacatggctctggttctgatgctcagaccacc
cacccactcccctgtcaccctgctgggcagggcccggcacagagcccccaatctagagac
ccaaaacactccaccaaccccttcacagagtatcgctccaagttggagtttgccctgaag
ctgggctactctgaggagctggttctgctggttgtgcggaagctagggcccgacgccctc
atcaatgacatactgggagaactggtcaaactgggcaccaagtcagaaacggatcaggct
ggagggtcagccacctcccactcgccctcctcctcctccttatcctcctcctctctggac
tcctgcaggctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcct
gtggtggtggatgggagtaatgtagccatgagccatgggaataaggaagtgttctcctgt
cacggcatccagctggctgttgattggttccttgagcgcggtcaccgtgacatcactgtg
tttgtgcccgcctggagaaaggaacagtccagaccggacactctcatcacagaccaggag
atattgcggcatctggagaaagacaagatccttgtgttcactccctctcgtcgggtccag
ggccgccgggtggtctgctacgatgaccgcttcatcgtcaagctggcctacgagtccgac
ggcatcatcgtctctaacgacaactaccgggacctggccaatgagaagccagagtggaag
aagttcattgacgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcct
gatgatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagtt
atcccagaacacaggaagcagcaatgtccctatgggaagaagtgcacttacggccacaag
tgtaagttcttccaccctgagagaggcagtcagccccaacgcgctgtggccgacgagctg
cgtgccaagaacttctcttcatcctctacctcttcctccaaaatggtgggcgaggctctg
atggtgaagagtcacagcatgtccagcagctccagggtagacgggatcccagacccccac
caagctcccccgaagagacagtcggaccccagcctttgcgccccctcctacaacgacctc
ctggaagagcgtctgggcaggaggactaaaacagaggcccgcagagggagtagcagcagc
agtagcagcagcagcagcagcctcctggcttctgctcctgggggacctccttccagccat
ggcttctctcttcaggactgggggaacacctcctccagagctccagggctgtcggcgctt
ggtcactcaaagtcatactccacctgtgaatccccggagctaagctaccactccctgatg
ggggcttactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccagct
gacctacggacgggctcaatggtgtctgactgcagcagcgagggcagcgtgagctcagac
tccttctcccctgatccgctgctggatgacagcctcaagtgccactatccccacccccat
caccaccaccatcactgccctagctgctacccacatcaccccaaccacccaccccctggt
ttgacccagcacccccatggaggctcccaccatggctaccctctagctcagagcagcctg
gaggatcctccctcctccctccaccacttcaaggctcagctctcctaccttcctccccat
attcagcaaccgtctgtggggagccactctggctgttctgggaactaccctccccaacct
ctatcccagacctcaagcccccactcccactctcacagctctcctctggggcataacctg
gggggctccacctggcaggacaacaacagcctctacaagcaatcccctgtccacccaagg
aggatctaccctgggccaggacaggagcagcgactggccagatgggacccccactacaag
catctcccccaggcctgctacgagcctttcactttccagtccctgcctgagggccgcaaa
caaccctggcactcgccctggcccagggggacacactctccccatcctcaatccctttcc
tcctcccatcttccacctcttacccaccactctacggccccccagcaccaggagccccct
gccctgggcagataccaggacgtgagggagaatgtgtttgtcaacctgtgtaacatcttc
ccgccagagctggtgagggtggtgatggtgaggaacccccatgtgatggacgcccagcag
ctggctgcagccatcctggctgagaagtcccaggctggctactga
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