Oncorhynchus mykiss (rainbow trout): 110520454
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Entry
110520454 CDS
T07259
Name
(RefSeq) nectin-3 isoform X1
KO
K06592
poliovirus receptor-related protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04514
Cell adhesion molecule (CAM) interaction
omy04517
IgSF CAM signaling
omy04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
110520454
04517 IgSF CAM signaling
110520454
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
110520454
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110520454
04090 CD molecules [BR:
omy04090
]
110520454
Cell adhesion molecules [BR:
omy04515
]
Immunoglobulin superfamily
Nectin family
110520454
CD molecules [BR:
omy04090
]
Proteins
110520454
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
V-set
I-set
ig
C2-set_3
Ig_VEGFR-1-like_5th
C1-set
Ig_CD22
Motif
Other DBs
NCBI-GeneID:
110520454
NCBI-ProteinID:
XP_036830908
Ensembl:
ENSOMYG00000014512
LinkDB
All DBs
Position
3:complement(67685050..67706221)
Genome browser
AA seq
382 aa
AA seq
DB search
MLLKLSCVILLIIQRDTESTRVIGECRTVVQGEDVDLSCRLIETTEDLEQITWQKSTWEE
TQNHNFMLIYPNGVTKFIAPNGLSGRVQFIGNPSENLGSIRITAVRLFDEGTFTCIFSVF
PSGAYTTEILLTVLVPPVVSVTVYVPPVTGENEVVLATCMAAGAKPQAEVTWKTGAFGSL
LRTVTNFTQHTNGTTTVLSHLLGLPTRAANQQQVQCVVNQSALATERSYNYTIDIHYPPQ
TVNVTFSEASKDTVLLCVADGNPHPNYTWSRVAQPWPESSVRAEGDIVHFLSLSSELNGL
YVCEASNPYGRATGSLNVHIFSETSAACWVLLVVILCLIVAAVALMLYRYKYGQFPWSPI
IANNQFQAPPQVEEDEPGTSGF
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgttactgaagctgagctgtgtgattctactcatcatccagagggatacagaaagtaca
cgggtcattggtgaatgcaggactgtggtacagggggaggatgtggacttatcctgcaga
ctgatagagacaactgaggacctcgaacagataacatggcagaaaagtacttgggaagaa
acacagaaccataattttatgctgatttatcccaatggggttactaaatttattgcaccg
aatggattgagtggtagagtccagtttattgggaacccatcagaaaaccttggatctatt
cgaataacagctgtcagactgtttgatgaaggcaccttcacatgtatcttcagtgttttc
cctagtggagcatacactacagagatacttctgactgtgcttgttcctccagtagtgagt
gtgacagtttatgttcctcctgtcactggggagaatgaggttgtcttagcaacctgtatg
gctgctggtgccaagccacaggcagaagtgacatggaagacgggtgcatttggcagtttg
ttgaggacagtgactaacttcacacagcacaccaatggaaccaccacagtactcagccac
ctgctagggttgccaaccagagcagccaatcagcagcaggtccagtgtgtggtcaaccag
tctgccctggcaacagaaaggagctacaactacaccatagatatccactatccacctcag
acagtgaacgttacctttagtgaggcctctaaagacacagtcttactatgtgtagcagat
ggcaacccacaccccaactacacctggagcagagtggcccagccatggcctgagtcttca
gtgagagcagagggagacatagtgcacttcctcagtctcagctctgagctgaatggtctc
tatgtctgtgaggcctccaacccctacggacgagcaactggttccctcaatgtacacata
ttctctgagacctctgctgcctgttgggttctactcgttgtcattctctgtctgattgtt
gctgcggttgcactcatgttgtacaggtacaaatacggacagtttccttggagtccaatc
attgccaataaccagttccaggcaccaccacaggttgaggaagatgaacctgggacgtct
gggttctaa
DBGET
integrated database retrieval system