Oncorhynchus mykiss (rainbow trout): 110520476 Help Entry 110520476         CDS       T07259                                  Name (RefSeq) collagen alpha-1(IV) chain   KO K06237   collagen type IV alpha Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04382   Cornified envelope formation omy04510   Focal adhesion omy04512   ECM-receptor interaction omy04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     110520476  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     110520476   09142 Cell motility    04820 Cytoskeleton in muscle cells     110520476  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     110520476  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:omy04147]     110520476    00536 Glycosaminoglycan binding proteins [BR:omy00536]     110520476 Exosome [BR:omy04147]  Exosomal proteins   Exosomal proteins of other cancer cells    110520476 Glycosaminoglycan binding proteins [BR:omy00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    110520476 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Collagen C4 Motif Other DBs NCBI-GeneID:  110520476 NCBI-ProteinID:  XP_036830922 LinkDB All DBs Position 3:complement(69380467..69469698) Genome browser AA seq 1646 aa AA seqDB search MFQSCTLVLLVALCYAVYQTEAEGCSGSSCEGKCDCSGVKGAKGERGFPGLQGNMGFPGM QGHEGPAGPMGPKGEYGESGTPGMKGTRGPNGLPGFPGNPGLPGIPGQDGPPGSQGIPGC NGTKGDRGTDGQSGFPGLQGPPGIPGLMGMKGDAGGVIGVIPLKGDKGFPGTPGLLGPNG PSGPEGPPGNQGSDGPRGFPGPPGPKGEKGDRLSFQSEKGDKGQQGFRGPPGPPGPPGPP SQEAGGNAVLNYLPGPPGQRGDTGDRGEKGFCIPHLNGVKGEQGLPGPRGKPGKDGENGL KGERGFPGGPGYHGTPGEKGERGPPANGDGAPGSPGPPGLPGLQGERGFPGIQGALGLPG RHIEGPPGEKGRPGEVGQKGDRGAEGESLRGKPGQDGLVGPPGPPGPPGDEPCDPALEKG PPGPPGPPGLQGELGQKGDQGDTCVQCEAFGPPGLPGPQGPKGLQGYPGAAGSKGDKGVP GPAGLDGSPGNSGTPGLVGAPGAHGEPGDIYLAPGLKGDKGLPGFVGTRGLPGVDGLPGK EGLAGLPGSKGEPAREGIKGDRGLDGDPGFSGPPGERGPPGVPGFGRPGEPGEKGTSGQQ GRLGIPGQPGVKGEPGKDVSSPGPQGSPGPRGQSGIPGLQGDRGLQGDPGMPGFPGQKGD SGVPGIGFPGLPGPKGYSGAPGAPGLPGEPGRSGQDGFSGKPGTPGPKGEPGRGLPGPKG SQGPPGETGFHGDKGNIGPTGIPGQEGHTGPPGAQGIQGDPGPPGQHGGTGPPGPPGAGE PGAPGPVGPPGEPGPFGHEGVKGDKGFPGSPGLDMPGPQGEKGDSGFPGLSGSKGLPGRP GPAGRDGFPGDPGLKGEMGVMGMPGTPGHQGSAGSPGTPGQRGNPGVSGPRGEFGEPGPK GERGEQGLQGPPGNMSELNMEHMKGQKGDSGDPGDPGHTGEKGYPGQAGVPGMPGKDGEP GTPGQPGEKGDTGVPGEPGSTGYPGNKGSIGEMGYPGSVGPKGAKGIVGTTGHPGFLGTE GVKGDKGSVGLPGVGLPGPPGEKGQLGLTGFPGNAGEKGQKGGMGVPGMPGTPGTKGDTG YIGHPGQPGRPGEKGVGGLPGSTGEPGQTGRPGEPGLQGPPGPTGEKGESGVDGIPGSSG DRGDQGFPGRGFPGTPGSSGFKGDKGSPGFPGSPGIPGIPGTRGEKGTAGFQGSLGQPGE QGHPGPAMEGPKGDQGVPGKPGEPGTSGVPGPAGVPGSAGGKGDKGDQGGQGVQGEQGLK GERGYSGLPGQSGLPGVDGLKGEMGLQGVPGFPGTKGELGVFGLKGELGDRGFPGTKGND GPPGPPGLHTFIKGESGFPGSQGPQGPVGPSGFPGLKGQQGMTGIQGIKGDEGNPGINGL PGAKGEPGLLGPSGPRGYPGPPGPDGVPGQVGPPGPSSMEHGFLVTRHSQSVEVPQCPEG TSLIYDGYSLLYIQGNERSHGQDLGTAGSCLRKFSPMPFLFCNINNVCYFASRNDYSYWL TSPEPMPMNMDPITGQGIRPFISRCSVCEAPAMVIAVHSQNIMIPSCPNGWDSLWIGYSF VMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRGTCNYYANSYSFWLAAIEDNEMFT KPIPTTLKAGSLRTHISRCQVCMKRT NT seq 4941 nt NT seq  +upstreamnt  +downstreamnt atgttccagagttgcaccctggttttgttggtggctctctgctacgccgtataccagaca gaggcggaggggtgctctgggtcatcatgtgaagggaaatgtgactgcagtggagtgaaa ggagcaaagggtgagcgtggatttcctggtctccaaggcaacatggggttcccgggcatg cagggccatgagggacccgctgggccgatgggccctaagggagagtatggcgagtcggga actcccgggatgaaaggaacacgtggtcctaatggtttgccaggcttcccaggaaaccca gggcttccgggcatccctggacaagacggcccccctggatcgcagggtatcccagggtgc aatggaacaaagggagatcgagggacagacggacagtctgggttccctggtctgcagggt cctcctggtatccccggactcatgggaatgaaaggagatgcaggtggtgttattggagtc atcccactgaaaggagataaaggattccctggaacacctggtttactgggtcccaatggc ccctcggggcctgaaggcccaccaggaaaccagggatcagatggacccagaggtttccct ggcccacctggccccaaaggagaaaagggggacaggctgtctttccagagtgagaaggga gacaaggggcaacaagggttccgtggcccacctggcccccctggcccccccggacctcca tcacaggaagcgggaggaaatgctgttttaaattacctcccaggaccaccgggtcagaga ggagatacaggagacagaggagagaaaggtttttgcattccacatctaaacggggtcaag ggtgaacaagggctaccaggaccaaggggaaaacctggcaaagatggagaaaatggatta aagggagagagaggctttcctggtggccctggataccatggaacaccgggtgaaaaggga gagagaggccctccagcaaatggtgatggtgctcctggctctcctggacccccaggcctc ccaggcttacaaggagaaagaggtttccctggtattcaaggagctctgggcctaccaggc aggcacattgagggaccccccggagagaagggccggccaggagaggtcggtcagaaggga gacagaggtgcagaaggggagtctctcagaggaaagcctggacaagatgggcttgttgga ccccctggtcctcccggaccccctggggatgagccatgtgatccggcccttgaaaagggc ccacctgggccccccggcccacctggactacagggggagttaggacagaaaggtgatcag ggagacacgtgtgtgcagtgcgaagccttcggcccacctggactccctggtccccagggg cccaaaggactgcaaggttatcctggagcggcaggcagtaaaggagacaagggtgtgcct ggacctgctgggcttgatggaagccctggtaattcaggtactcctgggttggtaggtgct ccaggagcccatggtgaacctggcgacatctacctggctccagggctgaagggggacaaa ggtctgcctggtttcgttggcacacgaggtctacctggtgtagatggactgccagggaaa gaaggactagcaggcctgcctggatccaaaggagaacctgccagagagggcatcaagggg gaccgtggtctcgatggggaccctggtttctctggacccccaggagagaggggtcctcct ggggtaccagggtttggccggccgggggagcctggagagaagggtacatctggtcaacaa ggccgacttggaatccctggacaaccaggagtgaaaggtgaaccaggtaaagatgtgagc tcacctggaccccagggctcccccggacctcgaggacaatctggcatccctggactacaa ggtgacagaggactacagggagaccctggaatgccaggattccccggacagaaaggtgac tcaggtgtccccggcattggattcccaggactacccgggcctaaaggatactctggagct ccaggagctcctgggttgccaggagagcctgggagatctggacaggatggtttctctgga aaaccaggcacacctggtccaaagggtgagccaggtcggggtctacctggtcctaaaggt tctcagggccctcctggagagacaggttttcatggagataaaggcaacattggtccaact ggtattcctggacaagagggacacacaggaccacctggagctcagggaattcaaggtgac cctggcccccctggtcagcatggtggcactggaccccctggaccccctggagcaggagaa cctggggcccctggaccagtaggaccccctggagagccaggcccctttggtcatgaaggt gtgaaaggagataagggcttccctggctctcctggtctggacatgcccggcccccaggga gagaagggagactcaggattccctggactgtctggatcaaaagggttgccaggaagacct ggcccggctggcagagacggattccccggagacccaggcctcaagggagagatgggagtc atgggaatgcctggaacaccaggacatcagggttctgctgggagccctggaactcctgga cagagaggcaacccgggtgtctctgggcctagaggggagtttggtgagcctggacccaaa ggagagaggggagagcagggtctgcagggtcctcctggcaacatgagtgagctgaacatg gagcacatgaagggacagaaaggagacagcggagacccaggtgaccctggacacaccgga gagaagggttatccaggacaggccggagtacctggtatgccaggaaaggatggagagccc ggtacacctggtcaaccaggtgagaaaggagacacaggtgttcctggtgagcccggcagt actgggtatcctggaaacaaaggaagcattggagaaatgggatacccaggttctgtgggt ccgaagggtgctaaaggcattgtgggcacaacgggtcacccagggttcctgggtacagag ggggtgaaaggagacaagggatcagtcggtttgccaggtgtcggactgccaggaccccct ggagagaagggtcagttgggtctgactggtttccctggtaacgcaggagagaagggtcag aagggaggaatgggagtccccgggatgccaggaacaccaggaaccaagggagacactggt tacattggtcacccaggtcagccgggtcggccaggagagaagggtgtcggtgggctgccc gggtcaacaggagagccaggccaaacaggtcgaccaggtgagcctggtctgcagggtccc ccaggtccgactggagaaaaaggagagtcaggagtggacggcattcctggatcatcagga gacagaggagaccaaggttttcctggcagaggcttcccaggaacgccggggtcgtctggg tttaaaggtgataagggtagtccaggtttcccaggttccccaggtatcccgggtatccca gggaccaggggagagaagggtacggcaggcttccagggctccctgggccagccaggagaa cagggccacccaggacccgccatggaggggcccaaaggagaccaaggagtgccaggaaag cctggagaaccaggtaccagtggtgttccaggtcctgctggtgttcccggcagcgcgggg gggaagggagacaagggagatcagggtggacaaggagtacagggcgagcagggcttaaag ggagaacgaggatactctggacttcctgggcaatctggccttccaggtgttgatggactg aagggagagatgggactgcagggtgtgcctggttttccagggacaaagggtgaattgggt gtgtttggattgaaaggagagctgggagacagaggattcccaggaactaaaggtaatgat ggcccccctggtcctcctggcctccacaccttcatcaagggagaaagcggcttcccgggt agtcagggccctcaggggcctgtggggccctcaggtttccctgggctgaaaggacagcaa ggtatgacaggtattcagggtattaaaggtgacgagggaaaccctgggattaacggtctc cccggagccaagggagaaccaggcctgcttggtccctcaggaccgagagggtatcccgga ccccctggacctgatggtgttccgggtcaggtaggtcctcccggcccctcctccatggag catggtttcctggtaaccaggcacagccaatcggtggaggttccacagtgtccagaggga acatcgctgatctatgatggatactccctactctacatccagggcaatgagcgttcccac ggacaggacctgggtacggctggtagctgtctgaggaagttcagtcccatgcccttcctc ttctgtaacatcaacaacgtctgttactttgcctcccgtaacgactactcctattggctt acctcccctgagcccatgccaatgaacatggaccctatcaccggccagggcatcaggccc ttcatcagcaggtgttctgtgtgtgaggctcctgccatggtgatagcagtacacagtcag aatatcatgatcccatcatgccccaatggctgggactcactctggattggctactccttc gtcatgcataccagtgcaggtgctgagggctctggccaggccctggcatctcctggctcc tgtctagaagagttccggagcgcaccctttatcgagtgtcacgggcgtggaacctgcaac tactacgccaactcctacagcttctggctggccgccatcgaggacaatgagatgtttacg aaacccatacccaccacgctaaaggcaggaagtcttcggactcacattagccgttgccag gtgtgcatgaagaggacatag

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