Oncorhynchus mykiss (rainbow trout): 110520505
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Entry
110520505 CDS
T07259
Name
(RefSeq) BCL-6 corepressor isoform X1
KO
K23215
bcl-6 corepressor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
110520505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110520505
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
110520505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUFD
Ank_2
BCOR
Ank
Ank_3
Ank_5
Ank_4
Motif
Other DBs
NCBI-GeneID:
110520505
NCBI-ProteinID:
XP_036830951
LinkDB
All DBs
Position
3:70463764..70539757
Genome browser
AA seq
1883 aa
AA seq
DB search
MVDARLTPLATMGLDRNALMRDGLRLHGGVIYPGIQALSAEKPREVTNTLPLSYGRDGLP
DLLYKSDVSMDRSKPSNGYMGLYKSPPPGIQRGPEGLDRICVGPGGQKPSELGLGGAGAG
AGGYLRLPWGLSPGLYPFMDTSKYAALSMYKAQFLSQPSPYLPQHLAYQSLCASQGGNMN
PAAASATERLYFMPPYPPSPISSPLVGSPMRIPAVSVAPTSMVHCQEKGLSVGSRIHHEG
SPFGQQLHQPPPPPLHLQPPHTDRDRPLSRNSKPTRPTSNKGANNSSGGGSNSLPIDSSP
RASTRLPQPAPPLPPTLSDSTLDLQRPVPRIGPPSSSSSQSMPHPFYVSSIAQEHPSPAR
PSPHKPRPRDGAPEHRAGGCERKPNRSPSKPSSERKTPPNKTTKDPADPKPLDLSGRLLE
FDLPPNSFPIKMEALGLRYGHPPSRELLKETLSPSSHPSHSVVCSTFSKAPDRPERISTL
HSSWVVPTPISTIGSTHTHPHPPALSPSPRPSPDPQGKRSSPSVIKHKVIERVLPQSQQN
SPSCLRVGEPHTNPIPSNHKPASTMPPSPKPNGDWPNHSPSQSEGSPMAGHHRGSTEKPL
KAPKRAETSQEVSPYIKRPCLENTNGHPPSHLYLAHSMAYANRYLHYSVPDSMALHSLPL
PGKGPAYPHPVLLGSSSLYPSHLAAKQPLPYHSLTYNSQEMTHPLMHTHPDSKALERADQ
GPKCRGHGQDKPRGLTEDCGGSHRGRSGVETGEGSHVKPKREDGEQGGSQPRPTSSSSLS
TPSKDRIVCIDLVHSDTDGESTPTTNKPQVSVTIPIARGNQHKCCHGNENIREVEREPKH
QLHHHHPQHLHHHPSPSSTMTTIHTDRQPETLCVRPKLLQETGCPGVASSPPWGSPKLVN
RAEESPEDQSPSSDPGDQGEQDQSTLRCARTSGDRKSGDHISGNRTPGVCTTGDCDRKSG
DHLCRDGTFSCDFTSGEEREEMDKRNSSHPIHSYMGLGKERDSERESVGDTEESHGEGDE
DEEGGRRGSRRTGLTKRIASSLGYVGDRIKCVTTELYADSSKLSREQRALQMEVISREGD
NISRPAAIWERAMMRFSELELKEKECGGVSESAAGRELADGQRRAREWEHCQHTARQGER
EGGRKVYGSNRVPVLQRCGGQRESLSQGQEAWEGARDGARVGEGGRRSPPILAMADGHPK
EKGGQNTVPTSKCTHILQEKDEEEAGEKRVEEKARITSDVCVLPTAPPSNDDDDDEEVRK
LKVCIELKGLCLRKPSASSPERLEVKEERAWSSHHSPSSLSRTLPPAQAPPPRDRKFKVD
PEVKPLPQKPEITKSWAREMLANGDAKRVGLLPLTQQRDRSAPQGPLMGPGCDRGSKEPR
RGGVAVKTVGQFPLPSAPEPPTGDTASLKPRRHGDMDKPKGKRPCKTKHTSQREREMERR
RELLNGASNQHGSTDLGAALVDKVSEQCARRKRPSSPLHYLSSPVKPCSPATGPLSLPPQ
VNGSGTVPPEKAGVRRAPPAEPPVVRPIPPEARRLIVNKNAGETLLQRAARLGYEEVVLY
CVENRVCEVNHRDHAGYCALHEACARGWLSIVIHLLEHGADINCSAQDGTRPLHDAVEND
HLDVVRVLLSYGADPTLSTYSGRGLLKMTHSNSMERFLTDYFADLQGHSDDPEIHWEFYG
SAVCESLEEGSVCNMLADPPGPEEDDGDRKELFEFEFSNQPLLPCYNIQVSLSQGSRNWL
LLSDVLRKLRMSARSFRSSFPHMKVVTMAEAEFYRQASLSQLFSCPDELEGFQPDSKELL
DLVEGSAELAALLGSTLECLDDRWDEPLEANVNAKANVNGNIRAMANAKAKTNSKTNGNA
NFKAKANANRRLLSLTLNFDSDF
NT seq
5652 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgccaggttaacccccctggccaccatgggtctggaccgcaatgctcttatg
cgggatggcctccgcctgcacggcggcgtgatctacccagggatccaagcgctgtcggct
gagaagccccgcgaagtgaccaataccctccccctgagctacggccgggacggcctcccg
gacctcctctataagtctgatgtctccatggacaggagcaagcctagtaatggctacatg
ggcctgtacaagagccctccaccaggcattcagagggggccagagggcctagacaggata
tgtgtggggcctggggggcagaagccctcagagctgggcctggggggtgctggtgcagga
gcaggtgggtacctacgtctgccctgggggctgagcccgggcctctaccccttcatggac
acgtccaagtacgccgccctcagcatgtacaaggctcagttcctcagtcagcccagcccc
tacctgccccagcacctggcctaccagtccctctgtgcctcccagggggggaacatgaac
cctgctgctgcctcggccaccgagaggctctacttcatgcccccctaccccccgtccccc
atctcttcccccctggtggggtctcccatgaggatcccagcggtgtctgtggcccccaca
tccatggtacactgtcaggagaagggactgagtgtcggatctcgcatccaccacgagggc
tctccgtttgggcagcagcttcaccagcctccccctccacccctgcaccttcagcccccc
cacacagaccgagacagacccctcagcaggaacagtaagcccactagacccacctcaaac
aaaggagccaacaacagcagtggtggtggtagtaatagccttcccattgattcctcccct
cgagcctctactcgcctcccccagcctgctcctcccctgcctcccactctcagcgacagc
accttagacctacagaggccagtccctcgaatagggccaccatcttcctcctcttcccag
tcgatgcctcacccattctatgtgagcagcattgcgcaagagcacccctcccccgcccgg
cccagcccccacaaacccagacccagggatggggcgccagagcacagggctggggggtgt
gaaaggaaacccaatcggtccccttctaaaccgtcctctgagcggaaaaccccaccaaac
aagactaccaaagacccagcagacccaaagcctctggatctctctggaaggctgctggag
tttgacctgcctcccaacagcttccccatcaagatggaagctctggggcttcggtacgga
catcccccaagccgggagctcctgaaggagaccctctcaccctcctcccacccctcccat
tcagtggtctgcagcactttctccaaggccccagacaggccagagaggatcagcactttg
cactcctcctgggtggtgcctacacctatctccaccattgggtccacccacacacacccc
caccccccagccctatccccctcccccaggcccagcccagacccccaagggaaacgctcc
tctccctcagtcatcaaacacaaggttatagagagagtcctgccccagtcccagcaaaac
agtccatcctgcctcagggttggagagccacatactaacccaataccttccaatcacaag
cctgcctccacgatgcccccgtcccccaaacccaatggtgattggcccaatcacagcccc
agccaatcagaaggttcccccatggccggccatcataggggctccacagagaagcctctt
aaagcccccaagagggctgagacgtcccaggaggtgtctccctatattaaacgtccctgt
ctggagaataccaacgggcacccgcccagccacctttacctagctcacagcatggcctac
gccaaccgatacctgcactactctgtacccgacagcatggccctccattctctccctctg
ccagggaagggcccagcctaccctcaccccgtcctgctgggcagtagcagcctgtacccc
tcccacctggcagccaaacagcccttaccctaccacagcctcacgtacaactcccaggag
atgacccaccctctgatgcacacacatccagactctaaagccctagagcgggcagatcag
gggcccaagtgccggggccatggtcaggacaaacctaggggtctcacagaagattgtggt
gggtcccacaggggccgaagtggtgtggaaacaggagaggggtcccacgtgaagcccaaa
agagaggacggggagcagggagggagccagcccagacccacttcctcctccagcctcagt
accccctccaaagaccgtatcgtctgcattgacctcgtccactccgacacagatggagag
tccactccgacaaccaacaagccgcaagtctctgtcaccattcccatcgccaggggcaac
caacacaagtgttgccatggcaatgaaaacattagggaagtggaacgggagccaaaacac
caactgcatcaccaccacccccagcatcttcatcaccaccccagcccaagctccaccatg
acaactatccacacagacagacaaccagaaactctctgtgtgagaccaaagctcctccag
gagacgggctgtccaggtgtggcctctagcccaccttggggctccccaaagctggttaat
cgggccgaggagagccctgaggaccagagcccttcctcagacccaggggaccaaggggaa
caggaccagagcaccctgcgctgtgcccgaacgtctggcgaccgcaagtctggcgaccac
atctctggcaaccgcacgcctggagtctgcacaactggggattgtgaccgcaagtctggc
gaccacttgtgtagagatggcacgttttcttgcgacttcacgtctggagaggagagagaa
gagatggacaaacgaaactcctcccaccccatccatagctacatgggcctggggaaggag
agggacagtgaaagagagagcgttggagacacagaggagtcacatggagaaggtgatgag
gacgaagagggtgggcgaagaggctcacggaggaccggcctgaccaagaggatcgctagc
tccttgggctatgtgggtgaccgcatcaagtgtgtcacgaccgagctgtacgcagactct
agcaagctgagccgggaacagcgcgccctgcaaatggaagtcatatcacgagagggggat
aatataagtcgacctgcagctatctgggagcgggcgatgatgcggttctcggagctggag
ctgaaggagaaggagtgcgggggtgtgtctgagtcggcagcaggacgggagttggcagac
ggccagcggagagcgagagagtgggaacactgccaacacaccgccaggcagggagagagg
gagggtggaagaaaggtctatgggagcaacagagtcccagtcctccagaggtgtgggggc
caacgggagagcctttcccaagggcaggaggcctgggagggtgctagagatggtgccaga
gtgggagagggtgggcgacggtcacctcccatcctggcaatggcagacgggcaccccaag
gagaagggagggcagaatacggtacccactagcaaatgcacacacatcctacaggagaaa
gatgaggaggaggcaggagagaagagggtagaggagaaggcaaggattacttcagatgtc
tgtgtgctgcctacagctcctcctagtaatgatgatgatgatgatgaagaggtcaggaaa
cttaaggtgtgtattgagctgaaggggctctgcctccgcaagccctctgcctcctcccct
gagagactagaggtcaaagaggagagggcatggtcatcacatcacagcccttcctccctg
tcccggacactccccccagcccaagccccgcccccgcgggacaggaagttcaaggtcgac
ccggaagtgaaacctctgccgcagaaaccagagatcacgaagagctgggccagagagatg
ctggctaacggagatgctaaacgcgttggattactccctttgacccagcagagggacaga
tcggccccccaggggcccttgatgggaccaggctgtgaccggggatccaaggagcccagg
agaggaggggtggcggtgaagactgtgggtcagttccccctcccctctgcccccgagccc
cccaccggtgacaccgcctctctcaagccacgtcgtcatggtgacatggacaaacccaaa
ggcaagcggccgtgcaagaccaaacacaccagccagagggagagagagatggagcggagg
agagagctgctgaatggcgccagcaaccagcacggcagcactgatctgggagcagctctg
gtggacaaggtcagtgagcagtgtgctcgaaggaaaaggccctcttctcccctacattac
ctcagctctccggtcaagccctgttcccctgcaacggggcccctctccctacccccccag
gtgaatggcagtgggactgtcccaccggagaaagcaggggtgaggagggcaccccctgct
gagcctcctgtggtgcggcccatccccccagaggcacgaagactaatcgtcaacaaaaat
gctggagagacgttgttacagagagcagcacggctcggatacgaggaggtggtgctgtac
tgcgtggagaaccgtgtgtgtgaggtgaaccacagggaccatgcaggctactgtgccctc
cacgaggcctgcgcccgcggctggctttctatagtcatacacctgctggagcacggggcc
gacatcaactgcagcgcacaggacggcactaggcctctgcatgacgcggtggaaaatgac
catctggatgtagtgcgggtgttgctgtcctacggggctgaccctactctgtccacctac
tccggccgcggtctgctcaagatgacccacagcaacagcatggagcgattcctcactgat
tattttgctgacctgcagggccactctgacgacccagagatccactgggaattctatggc
agtgctgtgtgtgagtccttagaggagggcagtgtgtgtaacatgctggcggatcctcca
ggaccagaggaagatgacggggacaggaaggagctctttgagtttgagttctccaaccaa
cccctcctcccctgctacaacatccaggtgtccttgtcgcaggggtccaggaactggctt
ctcctctcagatgttctccggaagctgcggatgtcggcccgttccttccgctcctccttc
ccccacatgaaggtggtgacgatggctgaggcagagttttaccgccaggcctccctctcc
cagctcttctcctgcccagacgagctggagggcttccagccagacagcaaggagctgctg
gacctggtggaggggagtgctgagctggccgctctgctgggatccaccctggagtgcctg
gatgaccgctgggacgaacccctggaggctaacgttaatgctaaggctaatgtcaatggg
aacattagggctatggctaatgctaaagctaagactaactctaagactaatggtaatgct
aattttaaagctaaggctaacgctaacaggaggttgttatccctgaccctgaactttgac
tcagatttctga
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integrated database retrieval system