Oncorhynchus mykiss (rainbow trout): 110520523
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Entry
110520523 CDS
T07259
Name
(RefSeq) guanine nucleotide exchange factor DBS isoform X1
KO
K20685
guanine nucleotide exchange factor MCF2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520523
Membrane trafficking [BR:
omy04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
110520523
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
Spectrin_5
CRAL_TRIO_2
PH
SH3_1
SH3_2
Spectrin
hSH3
CRAL_TRIO
PH_10
CEP104-like_TOG
Spectrin_SESTD1
Motif
Other DBs
NCBI-GeneID:
110520523
NCBI-ProteinID:
XP_036830975
LinkDB
All DBs
Position
3:complement(72010695..72114513)
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AA seq
1188 aa
AA seq
DB search
MMLWMKTEEMALGTMLERLRLVIQNVDEIMQQENSPLCAIDITPDLRKKFAFLLGGRGQN
GSPIIVFPEFSAFGEIQEREFHNVLTYLTNVPSLSAAGVGFILVIDRRQDRWAAVKGTLL
RIAGSFPGNLQLVLVLRPTTLFQRTLSDILFKFNRDEFKMKVPVIMLSSVTELHSYIDQT
QLTTELGGTQEYCHEQWISHRTDMEGFALMVKRTAQILQSFGTELAETELPNDIQATANL
LRSHTDKKDKMKEDLHVALGQGSRLLESINEPVVRDPDHNRNQGELENLSTVQRLLSQLD
ETERACDEFWGTHQAKLEQCLQLRHFEHNFREMRCLLDQVAERLTAFSEVGINPAHADHI
FCDLNSHEARVLEVLDEAQALAREGDELIQSSHYAEDSIQPKCSELRAVSKELSSTLRAR
KDHLLRAMELHHNLERAAKWCGDGLYLLASQPVDKCQSHEGAESALQEMERYLDTAGQNK
LTDPSSIYSDYKTVLNQDFRDQIEKVFQKQVSVQEMFEKRMVSLKKLAAKQTRPVQPVAP
RPEAFIKSPLSSPAKRVLEKSCSEGDSVNGVSSGTVEGQLQSSRSTSLSEEDENLAILRK
HVMNELLETERGYVEELHCVLQGYASEMDNPAMASLMPAPLQNKKDVLFGNMPEIYTFHK
RTFLRELEEYQGCPELVGRCFLLRMTDLQIYEKYCQNKPRSESLWRQCSDCTFFQECQKK
LEHKLGLDSYLLKPVQRITKYQLLLKELLKYSKGCEGSEALQEALTSILGILKAVNDSMH
LIAITGYDGHLGDLGRLLMQGSFSVWTEHKKGHAKVKDMARFKPMQRHLFLHEKALLFCK
RREENGEGYEKAPSYSFKQSLSMSAVGITENAKGDNKKFEVWCNSREEVYIVQAPTTEVK
TTWVNEIRKVLTTQLEAYRDLPACLPEASQQRSSDGLFQFPPTAGEPVSLGSFRRGERSM
KVKKGEPSSPDANSSPITKDGAVTSPTSDRAAVAKKRFTLQGFSNFSKDLSPPDKKSVTL
PRMPLSLPGSPTSPGHKTKRHEIKSDPTPFGFKGWTKGSLSLDANEENDGYSSTEEPLTS
DPEDEGGKKLCAGKYTVVSDYEKCSTQDLSVKSGETVQLIKEGEDGQWFVKNLKTKQEGW
VAAANLYTLIGESTSCQSLTSSEGSGSGNLSTSSSCCETNTSSSDIKP
NT seq
3567 nt
NT seq
+upstream
nt +downstream
nt
atgatgctgtggatgaagacggaggagatggcccttggaacgatgctagaaagactcaga
ctggtcatccaaaatgttgatgagatcatgcagcaggagaacagccccctctgtgccatc
gacatcacccctgaccttaggaagaagtttgccttcctgttagggggccgagggcagaac
ggcagccccatcatcgtgttcccagagttctctgctttcggagagattcaagagagggag
ttccacaacgtgctcacttacttgaccaacgttcccagtctgtctgcagcaggagtgggt
ttcattctggtcattgaccgaaggcaggaccgatgggctgccgtcaaggggaccctgctc
cgcatcgcaggttcattcccagggaacctgcagttggttctggtattgaggcccaccaca
ttattccagaggactctatcagacatcctgttcaagttcaacagggatgagttcaagatg
aaggtgccggtgattatgttgagttctgtgactgagcttcactcctacatagaccagaca
caattgactactgagctgggaggaacgcaggagtactgccacgagcagtggatctcacac
cgtaccgacatggagggctttgctttgatggtgaagagaacagctcagatcctgcagtcg
tttgggacagagctagcagagactgaactacccaatgacatccaggctactgcaaactta
ctgagatcacacactgacaagaaagacaagatgaaggaggatctacatgtggctctagga
cagggcagcagactgttggagagtattaatgagccagtggtcagagatcccgatcacaac
aggaaccagggtgaactggagaacctgtccaccgtacagagactgttgtcccagttggat
gagaccgagcgggcgtgtgatgagttctgggggacacaccaggccaagctggagcaatgt
ctgcagctccgccactttgaacacaacttcagagagatgagatgtctgctggaccaggtg
gcagagagattgacagctttctcagaggtgggaattaaccctgcccatgctgatcacatc
ttctgcgacctgaacagccacgaggcgagagtcttagaggtattggacgaagcccaggct
ttggcccgtgagggtgacgagttgatccagagctctcactacgctgaggactccatccag
cccaaatgcagcgagctccgagccgtgagcaaggaacttagttccaccctgagagcaagg
aaagatcacctactcagagctatggaactacaccacaatctggagagggctgctaagtgg
tgtggtgatggcctctacctgctggcctcccagcccgtggacaagtgtcagtcacatgaa
ggggcggagtcagcgctgcaggagatggagcgttacctagatacggcgggacagaacaaa
ctaactgatcctagctccatctacagtgattacaagacagtgctcaaccaggacttcagg
gaccaaatagagaaagtctttcagaaacaggtatccgtgcaggagatgtttgagaagagg
atggtcagtctgaagaagctggcagccaaacagaccaggccagtccagcctgtggcccca
aggcctgaagccttcatcaagtccccactctcctcgccagcaaagagagtgctggagaag
agttgctcagagggagactctgtgaatggggtcagcagtggaacagtggagggccagcta
cagagcagcagaagtacctcactgtcagaggaggacgagaacctggccatcctcagaaaa
catgtaatgaatgagctactggagacagaaagggggtacgtggaggaactgcactgtgtc
ctacagggctatgcctcagagatggacaatccagccatggccagcctcatgcccgctcct
ctgcagaacaagaaagatgtgctgtttggcaacatgccagagatctacaccttccacaag
aggacctttctgagggagttagaagagtaccaaggctgcccggaacttgtgggtcgttgt
tttctgctgaggatgacagacctgcagatctatgagaagtattgtcagaataaacctcgc
tctgagagcttgtggagacagtgctccgactgcaccttcttccaggaatgtcagaagaag
ctggaacataaactgggcttggattcctatctcctgaaaccggtccagaggatcaccaaa
taccagctcctgttgaaggagctgctaaagtacagtaagggctgtgaggggtcagaggcc
ctgcaggaggcgctcacctctatcctgggaatcttgaaggctgtcaatgactccatgcac
ctcattgctatcactggatacgatggtcacctgggtgacctgggccggctgctgatgcag
gggtcattcagcgtgtggacggaacacaagaaaggtcacgccaaggtcaaggacatggcc
cgcttcaagcctatgcagagacacctgttcctgcacgagaaagccctgctcttctgtaag
agacgggaggagaacggggaaggctatgagaaagccccctcctacagcttcaaacagtcc
cttagtatgagtgctgtgggcatcactgagaacgccaagggtgacaacaagaagtttgag
gtctggtgcaactcacgggaggaggtgtacattgtgcaggccccgacgactgaggtgaaa
acgacgtgggtgaacgagatccggaaggttctgacaacacagctggaggcctacagagat
ctccctgcatgtcttccagaagccagccaacagaggtcgtcagacggactgttccagttc
cctcctaccgctggagaacctgtcagcctcggttcatttagaagaggggagaggagcatg
aaggtgaagaagggagaacccagcagccccgacgctaactcctccccaataaccaaagac
ggggcagtgaccagtcctacctcagacagagcagcagtggctaaaaagcgttttaccttg
cagggcttcagcaacttcagtaaagacctctcacctcctgacaaaaaaagcgtaacttta
cccaggatgcctctctctctgccaggatctcccacaagccctggccataaaaccaaacgt
catgagataaagagtgatcccactccgttcggcttcaaaggatggaccaagggctctctc
tcattggacgccaatgaggagaatgatgggtactctagcactgaagagcccctaacctcc
gaccctgaggacgaggggggaaagaaactgtgtgcagggaagtacacagtggtgtctgac
tatgagaagtgcagcacccaggatctgtcagtcaagagtggtgaaacagttcaactgatc
aaggagggagaagatggccagtggtttgtgaagaatctgaagactaagcaggagggctgg
gtggctgctgccaacctttacaccctgattggagagtccacgtcctgccagtctctcacc
agctcagagggcagtggctcagggaacctcagcacttcatccagctgctgtgagaccaac
accagctcctctgacatcaagccctga
DBGET
integrated database retrieval system
