Oncorhynchus mykiss (rainbow trout): 110520558
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Entry
110520558 CDS
T07259
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X1
KO
K09364
POU domain transcription factor, class 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
110520558
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110520558
03021 Transcription machinery [BR:
omy03021
]
110520558
Transcription factors [BR:
omy03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
110520558
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
110520558
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
DUF3839
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
110520558
NCBI-ProteinID:
XP_036831021
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All DBs
Position
3:complement(73661996..73697362)
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AA seq
758 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNASGTSKCGMESQSEDGNTEIQTNGLDFQRQTVQTTSAIT
NAHTQALLQQSKSEDSGAIPTSVQQGVLPQAQLMLAGGQIAGLTLSPAQQQLLLQQAQAQ
LLAAAMQQQSASQQSSTTGASISASAATPITQLPLSQPIQITSIPSGSTHLPGQLSQLGY
PYEMATFSSYLPQLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQSPQGQQSLLQG
QSLLTQLPQSQANLLQAHPSITLSTQPATPTRTIAATPIQPLSHSQTSPPKRLATPSLEE
PSDLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCK
LKPLLEKWLNDAVYADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEK
RFLEQNQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSGGYSNTGTGSSPIK
TIFTPTIPLVASTASLVTSNTPTTLTVNPVMPLNSTSVSGLTFTGTTIGATTNTASVIST
APMVTAVTSSPSLSPSPTALQATAAETGGTQEHTVVTQAPSSLATTLGTGQVMVAGLGLS
AALQGAAQLPTSASFAAMAGLNQGLMASTQFTPGGALLSLAPGGLGGALNPAMLSNSTLA
TIQGLWSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNL
VSAGAAGGGALQVSADHQVTTATVPVPASTITSASRAQ
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatgcgtcaggaacgagtaaatgtggaatggagagtcagagtgaggacggcaacacagaa
atccaaacgaatggactggactttcagaggcagacggttcagaccacaagcgcaatcacc
aacgcacacacacaggctctcctccaacagtccaagtcagaagactcgggtgcaattccg
acctccgtccagcagggggtgctgcctcaggcccagctcatgctggctgggggacagata
gctggattgaccctgtctccagcgcagcagcagttgttgttgcaacaggcccaggcccag
ctcctagcagcagccatgcagcagcagtcagccagccagcagagcagcactacgggggcc
agcatctctgcctctgcagccacccctatcacacaactgcccctgtcccagcccatccag
atcacctctattccctctggttctacccatcttccaggccagctaagccagctgggatac
ccctatgagatggcgaccttcagcagttacctacctcagttacaacagctgcagcagcag
aacctgaccatgccccagtttgtcctggttcagcctggccaccacatcgctacccagctg
cagcctggccagttcatcatctcacagtcaccacagggccagcagagtctcctgcaaggc
cagagtcttctaactcaactacctcaaagccaagccaacctcctgcaggctcatcccagc
atcacgctctccacacagccagcgactccaacccgcacgatagcagccacgcccatccag
cctctgtcccacagccagacctcgccccctaaacgcctggccacgcccagtctggaggag
cccagtgacctggaggagctggaacagtttgccaagaccttcaaacagagacgcatcaaa
ctgggcttcacacagggagatgttggcctggctatgggcaagctgtacggtaacgacttc
agccagaccaccatctcccgctttgaggccttgaacttgagcttcaagaacatgtgcaag
ctgaagccactgctggagaagtggctcaacgatgcagtttatgcagacaatctgtcgtct
gaccaggccctgtccagccccagcgccctgggctcccctggcctgggtatggaggggctg
aaccgcagacgcaagaagaggaccagcatcgagaccaacatccgcttggccttagaaaag
agatttctggaacagaaccaaaaacctacctctgaggagatcaccatgatcgccgaccag
ctcaacatggagaaggaggtgatccgggtgtggttctgtaaccgccggcagaaagagaag
aggatcaacccccccagcggtggatatagcaacacagggacaggcagcagccccatcaaa
accatcttcacccctacgatccccctggtggccagtacggccagccttgtgaccagtaac
acaccgaccacactgactgtaaacccagtgatgcctctcaacagcaccagcgtatctggc
ctgaccttcacaggcacgaccataggagcaaccacaaacacggcgtctgtcatctccacg
gcacccatggttactgcggtgaccagctccccatcgctaagcccttcccccacggccctc
caggccacggcggcggagacgggcggaacccaggagcacacggtggtcacgcaggcaccg
tcgtccctagcgaccactctggggacgggtcaggtgatggtggctggactgggcctgtcg
gccgccctgcaaggcgccgcccagttacccaccagcgctagtttcgccgccatggccggg
cttaaccaaggacttatggcgtcaacgcagttcactcctgggggggccttgctgagcttg
gctccaggggggctgggaggggctctaaaccccgccatgttgagcaacagcaccctggcc
accatccaaggtctgtggagcgctctggcatcaggcggtgctctccccatcacctcgctg
gatgggagcggtaacctgctgttcgccaacacctccgccggcagcacccccaacctgatg
caacccctcttcctgaacccccagaacctgtccctgctcaccaccaaccctgtcaacctg
gtgtcagccggagctgctgggggaggggccctgcaggtctcagctgaccaccaggtcacc
acggcgactgtaccagttcccgcctccaccatcacctctgcctccagggcccagtga
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