Oncorhynchus mykiss (rainbow trout): 110520618
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Entry
110520618 CDS
T07259
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1 isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110520618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110520618
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
110520618
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
110520618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_UBOX
fn3
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
zf-RING_2
TRIM_CC
zf-RING_5
Pur_ac_phosph_N
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
110520618
NCBI-ProteinID:
XP_036831139
UniProt:
A0A8K9X498
LinkDB
All DBs
Position
3:77418755..77478724
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILISHCSPNEPVQSISAFQCPTCR
YAITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERVAPDGTAMTSPSERVQ
CQFCEQDPPQDAVKTCVTCEVSYCDECLKATHPNKKPFTSHRLIEPMPDCHIRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPDCYLSERSEQEEADQ
EISTQTLDSNLSNLIKRNNELETLMGKLIQICQHVEGNASRQENKLLEECDLLMDVVQQR
RQIIATKINEGKAIRLRKLAQQIATCKQIIERSSSLITQADHTLREGDHARFLQTAKSIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLEGLDYLTAPNPPIIREELCTASY
DTITAHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYIFMVKAINQAGSRSSVPGKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETSSKKS
HNQDRFTSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDITFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCQD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagctgacctgcccaatctgtctggagctcttcgaggacccc
ttgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgcatcctgatctcc
cactgcagccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgccatcaccctcaaccagaggggcctagagggactgaagcgtaacgtcactttgcag
aacatcatcgaccgcttccagaaggcttccgtgagcgggcccaactcccccagcgagact
cgccgtgagcgggtcgccccggacggcacggccatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaagaccctccccaggatgccgtcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcttgaaggccacccaccccaataagaagcccttcaccagc
caccgtctgatcgagcccatgccggactgccacatcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagtagccgccctcagcgaccgctatgagaaa
ctcaagagaactccagactgctatctcagtgagaggagcgagcaagaggaagcagaccag
gagatatctacgcaaaccttggactccaacctcagcaatctgattaagaggaacaacgag
ttggaaactctgatgggcaagttgatccagatctgccaacatgtggaggggaatgcatca
agacaagagaacaagctcctggaagagtgtgacctcctgatggacgtggtacagcagaga
agacagatcatagccaccaagataaacgagggaaaggctatccgtctgagaaaactagcc
cagcagatcgccacctgcaagcagatcatcgagagatcgtcatccctcatcactcaggca
gatcacaccctgagggagggagaccacgcccgcttcctgcagacagccaaaagcatctgc
gagagagtgtccatggcgacagcatcctctcagatcctgataccagagatcaacctgaat
gacacctttgatacgtttgcgttggactttacaagggaaaagaaaatgctggaaggcttg
gattacctcacagcaccaaatcccccaataatccgggaggaattatgtacggcatcgtat
gacaccatcactgctcactggacatcagatgacgagttctgcgtggtctcctatgagctg
cagtatgccatcttcactggacaagccaatgtcgtcagtttgtgtaactcggctgacagt
tggatgattgtgcccaacatcaagcagaaccactacaccgtgcatggactccagtgtggc
accaagtacatcttcatggtcaaagctatcaaccaggcagggagtcgcagcagtgtgcct
gggaagctcaagaccaacagtcagccgttcaagttggacccaaagtctgctcacaagaag
ctgaaggtctcccacgacaacctgacggtggagcgagacgagacgtcgtccaagaagagc
cacaatcaggaccgcttcaccagccagggcagctacggcgtcactgggaatgtgtacatc
gacagcgggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacacgagtggatcggcaagaactcggcctcgtgggta
ttatctcgatgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgag
ccgtccccccacctgcgccgcgtgggggtgttgttggactacgacgccggttccctggcc
ttctacgatggcgccggctcacagcacctgtacacgttcgacatcaccttcgctcagcca
gtgtgtcccgtgttcaacgtgtggaacaagtgtctgactgttctcacggggctgcccatc
ccagaccacctcgaggggacagactgccaggattaa
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