Oncorhynchus mykiss (rainbow trout): 110520740
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Entry
110520740 CDS
T07259
Name
(RefSeq) protein SOGA3 isoform X1
KO
K27704
microtubule cross-linking factor
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110520740
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
110520740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SOGA
Fez1
ATG16
KxDL
Dcc1
TSC22
Halo_GVPC
Motif
Other DBs
NCBI-GeneID:
110520740
NCBI-ProteinID:
XP_036793872
LinkDB
All DBs
Position
2:11307174..11324807
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AA seq
854 aa
AA seq
DB search
MNPASGGAADSRSQLDNSNRKQQQQRASSPAGGKDIGSKETPKSSTPSKIITSKQCGGGR
GNRGSSPVSTATSKDRLSSSSKGAASAAGAAPVQSDGAEIHTLTRAAAAAGSGRGAAEER
SSPSEDSRCTDISCLKGDTTRVVSDQPCSSKSPKLKNNNPRGGGGEGEASSTATGNKKSS
GKSSVGCGPGFWREGCLQSELIQFHLNKSLKKGGGKMKAKTPSPPEPVTETAEPEDLSPE
AIVNEPEPVPEPDQLFQEEIEKLEDENDELKTEIEEMRAEMDEMRDTFYEEDACQLQDMR
RELERANKNCRILQYRLRKAERKRMRFAQTGEVDGELLRALEQDLKVAKDVSVRLHHELE
NVEEKRTKTEEENEKLRQKLIEVEVTKQALHNQLEKAKELSLKRRGGRDVQKEKRIPQTP
IEEDNEDLKCQLAFIKEEAILMRKKMAKIDKEKDRLEHELQKYRSFYGDVDSPGPKGEAG
GPATTRESELKLRLRLVEEEANILGRKIVELEVENRGLKAELEDMRDRDEVAGGSAEHGC
SREQGEELRELRQQLQLVEDEAELLRRNLQDAEEDNNKVTGELNKLKYKEGSRHGAGGGG
GGAGAAADRAKVEVLQEELKAARLQINELSGKVMQMQYENRVLLSNMQRYDLASHLGIRA
SPRESDAESDGGDDASTSSRFPPHRKREGPIGGESDSDEVRNIRCLTPTRTLYSPEGRFL
PRSLKDRQQMVDIRIEAERLGRTVDRLIADTSTIMAEARVYMVSNGELYEEEGSTVREHE
LLYRITAQMKAFRKELQGFIDRLDVPKPEDKEEEEPLSMFQPIILLILILVLFSSLSYAT
IFKLVFLFTLFFVL
NT seq
2565 nt
NT seq
+upstream
nt +downstream
nt
atgaaccctgcctcgggcggcgctgccgactcccgcagccagctagacaatagcaacaga
aagcagcagcaacagcgcgcttcctccccggctggcggcaaagacattggatctaaagag
acaccgaaaagcagcactccgtcaaagatcatcacgtcaaagcagtgcggaggagggaga
ggcaaccgcggcagctccccggtctcaacggctaccagcaaagacagactgtcttcttct
tctaaaggcgcggcaagcgcggcaggcgcggcccctgtccagtccgatggtgctgaaatc
catacgttgaccagggcggcggcggcggctgggagcggcagaggagcggcagaggagcgc
agtagtccgtctgaagactcgcgttgtactgatatatcgtgtttgaagggggatacgaca
cgggttgtttctgatcagccttgttcatccaaatctcctaaattgaagaacaataacccg
agaggagggggaggagaaggcgaggctagcagcacagcgaccggtaacaaaaagagctcc
ggcaagagcagtgtgggctgcggccctggcttctggagagagggatgtttgcagtcggag
ctgatccagtttcacctgaataaaagcttaaagaaaggaggaggaaagatgaaggcgaag
acaccgtctcccccggagccggtcacggaaacggcggaaccagaggatctctcccctgag
gccatcgttaacgagcccgaaccggtacctgagcccgaccagctatttcaggaggagata
gagaaactggaggatgaaaacgatgaactaaagactgagatagaggagatgagagcggag
atggacgagatgagagacacgttctacgaagaggacgcgtgccagctgcaggacatgcgt
cgcgagctggagcgagccaataagaactgccggattctccagtaccgtctgaggaaggcg
gagaggaagaggatgcggttcgctcagaccggagaggtagacggagagctactgagggcc
ctggagcaggacttgaaggtagcgaaggacgtgtcagtgcgtctgcaccatgagttggag
aatgtggaggagaaaaggacgaagacggaggaggagaacgagaaactaaggcaaaagctg
atagaggtggaggtgaccaaacaggccctgcacaaccaactggagaaggccaaggagctg
tcactgaagaggagaggaggcagggatgttcagaaggagaaaaggattccacagactcca
atagaggaggacaacgaagatctgaaatgccagctagcgttcatcaaggaggaagccatt
ttaatgaggaaaaaaatggctaaaattgacaaggagaaggaccggctggaacacgagctg
cagaagtaccgctctttctacggggatgtggacagccctgggcccaagggagaggctgga
ggaccagccaccacccgggagtcagagctgaaactgagactgagactggtggaggaggaa
gccaacatcctggggaggaagatcgtagagctggaggtggagaatagaggactgaaggct
gaactggaggacatgagagacagggatgaggtggcaggaggctcggctgagcatggctgc
agcagggagcagggagaggaactcagggagctgagacagcagctacagctggtggaggac
gaggcagagctacttaggaggaacctgcaggacgcagaggaggacaacaacaaggtgacg
ggggagctgaacaagctgaagtacaaggagggctccaggcacggcgccgggggtggagga
ggtggcgccggggcggctgcagaccgggccaaggtggaggtcctgcaggaggagctaaag
gctgccaggctgcagatcaacgagctgagtggcaaggtgatgcagatgcagtatgagaac
cgggtcctgctgtccaacatgcagcgctacgacctggcgtcacacctgggcatcagggcc
agcccccgggaaagtgacgcagagagtgacggaggagatgacgcctccacctcatcgcgc
ttcccaccccaccgtaaacgagaaggccccatcggaggggagagcgactcggatgaggtg
cgtaacatccggtgcctgaccccaacccgcaccctctactcccccgagggccgtttcctc
cctcgcagcctgaaggaccggcagcagatggtagacatccgtatagaagcagagcggctg
ggccggaccgtcgacaggctgatagcagacaccagcaccatcatggccgaggcccgggtc
tatatggtctccaacggggagctttacgaggaggaagggagcaccgtcagggagcacgag
ttgttgtacaggatcaccgctcagatgaaggccttcaggaaggagctgcagggttttata
gacagactggatgtccccaagccagaggacaaagaggaggaggaaccactgtccatgttt
cagcccatcattctgctcatcctcatcctcgtcctgttctcttcactctcctacgccacc
atcttcaaactcgtcttcctcttcactctcttcttcgtcctgtaa
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