Oncorhynchus mykiss (rainbow trout): 110520743
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Entry
110520743 CDS
T07259
Symbol
taf2
Name
(RefSeq) transcription initiation factor TFIID subunit 2 isoform X1
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110520743 (taf2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
omy01002
]
110520743 (taf2)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
omy03021
]
110520743 (taf2)
03036 Chromosome and associated proteins [BR:
omy03036
]
110520743 (taf2)
Peptidases and inhibitors [BR:
omy01002
]
Metallo peptidases
Family M1
110520743 (taf2)
Transcription machinery [BR:
omy03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
110520743 (taf2)
Coactivators
SAGA/TFTC/STAGA complex
110520743 (taf2)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
110520743 (taf2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_TAF2_C
TAF2_3rd
Peptidase_M1
Peptidase_M1_N
IL2
SR-25
Motif
Other DBs
NCBI-GeneID:
110520743
NCBI-ProteinID:
XP_036791358
UniProt:
A0A8K9WSR5
LinkDB
All DBs
Position
2:complement(4170743..4223204)
Genome browser
AA seq
1217 aa
AA seq
DB search
MHEVKMNRKKDKGFESPRPFKLTHQVVCINNINFQRKSVIGFVELTIFPTVVNLNRIKLN
SKQCRIYRVRVNDLEAPFIYNDPTLEVCHHESKQRNLNYFSSAYTAAVSAVDPDAGHGEL
VIKVPSELWKQGDEMNVLKVYIEFSLDQPKGGLHFVVPDVEGSMAERGAHVFSFGYQNST
RFWFPCVDSYSELCTWKLEFTVDASMVAVSCGDLVETVYTHDMRKKTFHYVLPIPTAASN
ISLSVGPFEILVDPYMHEVTHFCLPQLLPLLKHSMSYLHEIFEFYEEILTCRYPYSCFKT
VFVDEAYVQVSSYASMSIFSTNLLHSAMIIDQTPLTRQCLAQALAQQFFGCFISRMSWAD
EWVLKGISGYIYGLYLKKTFGVNQYRHWIKEELDKMVEYELKMGGVLLHPTFGGGKDKDN
PTPHLHFSIKHPHTLSWKYYKMFQCKAHLVMRLIENRISMEFMLQVFNKLLSLASTASSQ
KYQSHMWSQMLVSTHSFLKSISNVSGKDIGPLIKQWVDQSAVVKFFGSFAFNRKRNVLEL
EIRQDYTSSGTQKYVGPIKVTVQELDGSFNHTLQIEENSLKHDIPCHSKSRRNKKKKIPL
MNGEEVDMDLSAMDADSPLLWIRIDPDMSILRKVEFEQADFMWQYQLRYERDVVAQEESI
LALEKFPTPASRLALTDILEQDQCFYKVRQGACFCLAKIANSMMSTWTGPPAMKSLFTRM
FCCKSCPNIVKTNTFISFQSYFLQKTMPVAMAQLRDIQNLCPKDVLNFILDLIKYNDNRK
NKFSDNYYRAELIDALTNSLTPAISISNEVRTVDNLNGDVRLILEEITRSLNMEKLLPSY
RNTITVSCLRAIRMLQKNGHIPSDPSLFKSYAEYGHFVDVRVAALEAVVDYTRVDRSSVE
LQWLLNMVQNDPAHYIRHKILSMLGKNPPFTKAAESPLCNEALVDQLWKLMNSGTSHDWR
LRCDAVNLYYTLFGLTRPSCLPLPELGLVLNLKEKKAVLNPTIKPEQGLDTTEMTGNTMG
VHIPVMGFTSSLDEGLITMETVSSVSMSSGVAPPPQGLKRKLDSVVGPLGSSSPEPGQVL
QEEDTSKKFKIRFNTVEEDEIDMESPHDSQAFIHHHLNILERPSTPGKEPPAVDQAVLSL
PVTPLPSSFGKESTSSSKHSGDHHHHHHHHEHKKKKKKKHKHKHKHKHESKDKERDSHAF
SNSPASGRSVRSPSMSD
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgcatgaagtcaagatgaacaggaagaaggacaagggatttgagagcccgcggcctttt
aaattgactcaccaggttgtctgcatcaacaacatcaacttccaaagaaagtctgtgatt
ggctttgtggagctgaccatcttcccaactgtggtcaacctgaaccggatcaaactcaac
agcaagcagtgcaggatctacagggtccgggtcaacgacctagaagcaccattcatttac
aatgaccctactctagaggtctgccaccacgagtccaagcagaggaacctgaactatttc
tccagtgcctacacagcagcagtcagtgctgtggacccagatgcaggacacggcgagctg
gtcatcaaagtcccctcggagctgtggaagcaaggagacgagatgaatgtgctgaaggtg
tacatagagttctctctggaccagcctaaaggaggccttcactttgtggtgcctgacgta
gaggggagcatggctgagagaggagcacacgtcttctccttcggataccagaactccacg
aggttctggttcccctgtgtggactcgtactctgagctgtgcacctggaagctggagttc
acagtggatgcctctatggtagctgtgtcctgtggggacttggtagagactgtctatacc
catgacatgaggaagaagaccttccactacgtcctccccatccccaccgccgcctccaac
atctcactgtctgtcgggccctttgagatcctggtcgacccctacatgcatgaggtcacc
cacttctgtttaccccagctcctgcccctgttgaaacactccatgtcctacctgcatgag
atctttgagttctacgaggagatcctgacctgtcgctatccttactcctgcttcaagact
gtgtttgtggacgaggcctacgtccaggtgtcctcctacgcgtcgatgagcatcttcagt
actaatctgctccacagtgccatgatcatagaccagacccccctgaccagacagtgttta
gctcaggccctggcccagcagttctttggctgcttcatctccaggatgtcctgggctgat
gagtgggtgctgaaggggatctctggctacatctatggtctgtacctgaagaagaccttt
ggagtgaaccagtaccgccattggatcaaagaggaactggacaagatggtggagtacgag
ctgaagatgggaggagttctcttacacccgaccttcggcggaggaaaagacaaggacaac
cctacccctcacctccacttctccatcaagcaccctcacaccctgtcctggaagtactat
aagatgttccagtgtaaagcccacctggtcatgaggctcattgagaacaggatcagcatg
gagttcatgctgcaggtgttcaacaagttactaagcctggctagtacagcgtcctcgcag
aagtaccagtcacacatgtggagtcagatgctggtatccacccacagcttcctcaagtcc
atctccaacgtgtcggggaaggacataggacccctcatcaagcagtgggtggaccagagt
gcggtggtgaagttctttggcagttttgccttcaacaggaaacggaacgttctagaactg
gagattcgacaggactacacctcctctggaacacagaaatatgtgggacccatcaaggtg
acagtccaggagttggatgggtccttcaaccacacgctacagatcgaggagaacagcctg
aagcacgacatcccctgccactccaagagcagacgaaacaagaagaagaagatccctttg
atgaacggggaggaggttgacatggacctttctgctatggatgcggattctcccttgctg
tggatccggatcgatccggacatgtccatcctgcgtaaggtggagtttgagcaggcagac
ttcatgtggcagtaccagctcaggtacgagcgtgacgtcgtggcccaggaggagtctatt
ttagccctggagaagttccccacgccggcctcccgtctggccctcactgacatcctggaa
caggaccagtgtttctacaaggtccgccagggcgcctgcttctgcctcgccaagatcgcc
aactccatgatgagcacctggaccggtcctccagccatgaagtctctgttcaccagaatg
ttctgctgtaagagctgtccaaacatcgtcaagaccaacaccttcatcagcttccagagc
tacttcctacagaagaccatgcctgtagccatggctcagctcagagacatccagaacctc
tgtcccaaagacgtcctcaacttcatcctggacctcatcaagtacaacgacaacaggaag
aacaagttctccgacaactactaccgtgccgagctgattgacgccctcaccaactccctg
accccggccatcagcatcagtaacgaggtgcgcaccgtggacaacctcaacggagacgta
cgcctcatcctggaggagatcacacggtctcttaacatggagaaactactgcccagctac
cgcaacaccatcactgtcagttgtctcagagctatccggatgctccagaagaatggtcat
attcccagtgacccctctctgtttaaatcctatgcagaatacggacactttgtggatgtt
cgtgtggcagcgctggaagctgtggtggactacacaagagttgacaggagctccgtggaa
ctgcagtggctgctcaacatggtccagaatgacccggctcactacatcagacacaagatc
ctaagcatgctgggtaaaaaccctcccttcaccaaagcagccgagtctccactctgcaac
gaggctctggtcgaccagctgtggaaactcatgaactcaggtacgtctcatgactggcgg
ttgcggtgtgacgcggtgaatctgtactacactctgtttggtctgacgcgtccctcctgc
ctgcccctgcccgagctgggcctggtactcaacctcaaggagaagaaggccgtgctcaac
cccactatcaagcctgaacagggactagacaccacagagatgactggcaacaccatgggc
gttcatatccctgtcatgggcttcactagcagtctggatgagggcctgatcaccatggag
acagtgtccagcgtgtctatgtccagtggtgtggccccgccccctcagggtctgaagagg
aagttggacagtgtcgttggcccgctgggctcgtcctcaccggagccaggccaggtcctg
caggaagaggacaccagtaaaaaattcaagatcagattcaacaccgtggaggaagatgag
attgacatggagagtccccatgacagccaggcgttcatccaccaccacctcaacatcctg
gagaggccatccacaccaggtaaggaacctccagccgtggaccaggccgtcctctccctg
cctgtcacccccttaccttcttccttcggcaaagagtccacctcttcctccaaacacagc
ggtgaccaccaccatcaccaccaccaccacgagcacaagaagaagaagaagaagaagcac
aaacacaaacacaaacacaaacatgagagtaaagacaaggagagggactcccatgccttc
agtaacagccctgctagtggacgctccgtgaggtctccatccatgtctgactag
DBGET
integrated database retrieval system
