Oncorhynchus mykiss (rainbow trout): 110520752
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Entry
110520752 CDS
T07259
Name
(RefSeq) DENN domain-containing protein 3 isoform X1
KO
K20162
DENN domain-containing protein 3
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520752
Membrane trafficking [BR:
omy04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
110520752
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Prp19
WDR55
Beta-prop_EML_2
WD40
WD40_2
Beta-prop_WDR75_1st
uDENN
dDENN
Beta-prop_LRRK2
DUF5074
Beta-prop_Vps41
Beta-prop_EML
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-GeneID:
110520752
NCBI-ProteinID:
XP_036821845
Ensembl:
ENSOMYG00000025947
LinkDB
All DBs
Position
3:3534519..3556267
Genome browser
AA seq
1284 aa
AA seq
DB search
MADHLPSGLLEACVVVGASGDKLKDVYQSLQQGNSTTDLLILDPEVLQVHVPPFVTKENA
DESGVPRTFSRVQCRRSFIKKKERLVVAPSGPGGAGSSEGATVTEDVSVPKDIDLMALPQ
LCFPGGLQVTNEPKEERFHFLVFTDVFGNQTHGVVVQCCRPFQEGSVFYQNGHWSSTRTA
KLYTAFAICVISKHPYYNALKDCLSCLLAQLRASRLSEERVKEFAAKLSLVPIPPPGQLH
VVFNLRPLMIVLPSREDKEHPAVDLDLHLPFLCFRSKQILQIITGILMEQRLVFFSADWA
RLTLVAECFMFYIHPLHWQHPYVPILSAQMLDFVMAPTAFLMGCHLNHFEEVAAETDDLI
LINIDDGTVSSSCSETVDLPDVPFVSAECFTKRRKGLQLQHDLEVCHQGAGTDVNEMRML
RRQWQQNLNWEIKKVTLELIVNMFRDVSGHLNYEHRVFNSEEFLKTRELADLPFYRKVLE
THIFHSFLKDRLNRKMDAFTRMEVNTRSETQKMKAMTDNPRRPTMQEMARKYSSDPEIRL
NKRLGMSLPNLGEERHLNLLRQTSLKKTIIPESAFKIPPKPVKIFKLPEFPPPMVHHHVQ
NYYGELMILLGKAISCVPPENSTLLARYFYLRGFMNTLCSKRLDALSDFQNLYKTDIEIF
PTDLVKALVDSLQKDEFSQVDRRPELKRLIFKVKTDNERVLVQDDDHVKKFQLPKTHMLQ
EDFVKRIQESGIVKDVATIHRLFEALTVGQQKQIDPEVFRVFYTFWKETEVEAQDVHLPA
EVMEHLDNNECVYKLSCSVKTNQGVGKIAMTQKRLFLLTDGRPGFIEITKFRDIKEVNIS
FSPFLLLRIPSLKIKCSLRKEVFEANLKSACDLWNLMVREMWAGRTMADDHKDPQYMQQA
LTNVLLMDAVVGCLQTQKAIFAASKLAYFDRVKHEVPVMVPKTTLETLKHKINPSLDLPA
PQTVHVLLYTPGEGKQTADFLLLYTPGQLSYSEADGDGNPKLWCALSGGRVVVFDAASWS
MQQNCVQVGSSQLNCMLGLDQDQVWIGSQDSIIYIIDTRSMSCNKQLTEHRHEVMDFALE
ESDKMRQTYSCSADGTVILWDLSTLKVKKQFQLTCDRLMSIQLFNGTLWCCARDGIVELR
KNGTPHRKMTLPEDLRSIPTEFSSLILFLERGQLWTSCSDSDELCLWHCEDLTKPFLRVR
LQNCTGVNCMIKVKNQIWVGCSGPSPDQCRMSGKIYIVDTESHSVEKELMAHTDSVQALC
SAEGRYVLSGSACQDGKIAIWKVE
NT seq
3855 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccatcttccctcagggctactggaagcgtgtgttgttgtcggagcctctggg
gataaactcaaggatgtctatcagtctctacagcagggcaacagcacaacagacctcctt
attttagacccagaggtcttgcaagtccacgtgcctccgtttgtgaccaaagagaatgca
gatgagtctggtgtccccagaaccttcagtcgagtccagtgcagacggtccttcatcaag
aagaaggagaggctagtggtggctcctagtggccctggaggggccgggagcagtgagggg
gccactgtcacggaggatgtcagcgtccccaaggacattgacctcatggccctgccccaa
ctctgctttccaggggggcttcaagtaacaaatgaaccaaaagaagagcgttttcacttt
ctagtcttcacggatgtgttcggtaaccaaacccatggagtggtggttcagtgttgtaga
ccatttcaggaagggtcagtgttctatcagaatggacactggtcgtccaccaggaccgct
aagctctacactgcttttgccatctgtgtcatatccaagcatccttattacaatgctctg
aaggactgtctgtcttgtttgctggcgcagcttagagcaagcaggttgtctgaagagagg
gtgaaggaatttgcagccaaactgtctctagtgcccattccaccccctggacaactacat
gtggtgttcaacctgagacccctgatgatcgtactgccttccagagaggataaggaacac
cccgctgtagacctggacctccatttgcccttcctgtgctttagatccaaacagatttta
cagatcatcactggtattctgatggagcagaggttagtgttcttctcagctgactgggcc
cgcctcaccctggtggcagagtgtttcatgttctacatccaccccctccactggcagcac
ccctacgtgcccatcctctcagcccagatgctggacttcgtcatggcccccaccgccttc
ctcatgggctgccacctcaaccattttgaggaggtcgctgcggaaacagacgacctgatc
ttgattaatattgatgatggaacagtgtcttcttcctgctcagagactgtcgacctacca
gacgtccccttcgtttctgcagagtgttttaccaagcggaggaagggcctccagctacaa
catgatctagaggtgtgtcaccaaggggccggcacagacgttaatgagatgcgcatgctg
aggagacaatggcagcagaacctgaactgggaaataaagaaggttaccttggagctcatt
gtcaacatgttcagggatgtcagtggtcacctgaactatgaacaccgagtgtttaacagt
gaagagttcctgaagaccagagagctagctgaccttcccttttacagaaaggtcttggag
acacacatctttcattcattcctgaaggaccgcctcaataggaagatggatgctttcaca
cgcatggaagtcaacactcgctcagagacacagaaaatgaaggcgatgacagacaacccc
aggaggcccaccatgcaggaaatggccaggaagtatagcagcgacccagagatccgtctg
aacaagaggctggggatgagcctccccaacctgggagaggagcgccatctcaacctcctc
agacaaacctccctcaagaagaccattatccctgaaagtgccttcaagatcccgcccaag
cctgtgaagatcttcaagctgccagaatttcctcctcccatggtgcaccaccatgtccag
aactactatggagagttgatgatactactggggaaggccatctcctgtgttcctcctgag
aactccaccctcctggccaggtacttctacctgcgcggcttcatgaacacgctgtgttcc
aagcgtcttgacgccctcagtgacttccagaacctctacaagacggacatcgagatcttc
cccaccgacctggtaaaggcgctagtggactcgctgcagaaggacgagttctcccaggtg
gaccggcggccagagctcaagcggctcatcttcaaggtgaagacagacaacgagagggtg
ctggtccaagatgacgaccacgtgaagaagttccagctccctaagacccacatgctgcag
gaggactttgtgaagcgcatccaggagtctgggattgtgaaagacgtcgccaccatccat
agactgtttgaggccctcactgtggggcaacagaagcagattgacccagaggtgttccgt
gtgttctacaccttctggaaggagacggaggtggaggcccaggatgttcacctaccagct
gaggtcatggagcacctggacaacaacgagtgtgtctacaagctgtcctgctccgtcaaa
accaaccagggagtgggtaagatcgccatgacacagaagaggctgttcctgctcactgac
gggaggcctgggtttatcgagatcaccaagttcagagacataaaggaggtgaatatctcc
ttttctcctttcctgctgctgaggatcccgtctctgaagatcaagtgcagtctgaggaag
gaggtgtttgaggccaacctgaagtctgcgtgtgacctgtggaatctcatggtcagagag
atgtgggctgggaggacgatggcagacgaccacaaggatcctcagtacatgcagcaggct
ttgactaacgtcttgctcatggatgctgtggttggctgccttcagacccagaaggccata
tttgccgcctccaaactggcatactttgacagagtgaaacatgaagttcctgtgatggtt
ccaaagacaacattggagacgttgaaacacaagatcaatccatcactagacctcccagcc
ccacagactgtacatgtcttactctacacaccaggtgaggggaaacagacggctgacttt
ctgttactctacacaccaggccagttgagttactcggaggcagacggagatgggaacccc
aagctgtggtgtgccctcagtggtgggagggtggttgtgtttgatgcagccagctggtcc
atgcagcagaactgtgttcaagtgggatcctcccaactgaactgcatgctgggattggac
caggatcaagtatggattggctcccaggattccatcatttacataattgacactcgcagc
atgtcctgcaataagcagctgacagagcacaggcatgaggttatggactttgccctggag
gagagtgacaagatgagacagacatactcctgtagtgccgatggaacagtcattctgtgg
gacctctcaacgctaaaagtgaaaaagcagtttcaactgacctgtgataggcttatgtcc
attcagctcttcaatggaacactgtggtgctgtgccagagacggcatcgttgaactgagg
aagaacggaaccccacatcgtaagatgacacttcctgaggatctacggagcattcccact
gagttcagcagcctcatcctcttcttagagaggggccagttgtggacgagctgttctgat
tctgacgagctctgtctctggcactgtgaagacctgaccaagcctttcctgagggtgcgg
ctgcagaactgtacaggggtcaactgtatgatcaaggttaagaatcagatctgggttggc
tgcagcgggccgagccctgaccagtgcaggatgagtgggaagatctacatagtggacaca
gagagccacagtgtagagaaggagctgatggcccacacagacagtgtccaggcactgtgc
tctgcagagggccgctatgtactcagtggctccgcctgccaggatggcaaaatcgccatt
tggaaggttgagtag
DBGET
integrated database retrieval system
