Oncorhynchus mykiss (rainbow trout): 110520782
Help
Entry
110520782 CDS
T07259
Name
(RefSeq) ubiquitin-protein ligase E3A isoform X1
KO
K10587
ubiquitin-protein ligase E3 A [EC:
2.3.2.26
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
110520782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
omy04121
]
110520782
Enzymes [BR:
omy01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
110520782
Ubiquitin system [BR:
omy04121
]
Ubiquitin ligases (E3)
HECT type E3
110520782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
AZUL
Motif
Other DBs
NCBI-GeneID:
110520782
NCBI-ProteinID:
XP_036834954
LinkDB
All DBs
Position
1:1732789..1770434
Genome browser
AA seq
846 aa
AA seq
DB search
MKRAAAKHLIERYFRQLTEGCGNGACTNELCASCLGFQPLDHNAAAIRALELYKINTKLC
DLHPSAAFPDNSAEDTQPALLGDCHGKMTDNLFPPREDFREVRYLTEEKVYEILSICEGK
KDYSPLIRVIGRIFSNADGLVQSFRKDKEQHPNTKEQRKTHQAKDEDKDEDDKERTTAME
QESEASASMEGATGSTENRLGPVEVSVDIEAVRRVYNRLLSNEKMESAFLNALVYLTPNV
ELDLTYLDVYDTNPDYLNIFIIVMENSSLHSPEYLEMAMPLFCKCMSKLPLPALAKLTRL
WSQYSVEHIRRMMETFQQLITYTVISNEYVSDSLVNDDEGVVAATKCLKLVFYANVLGGD
LDTGHNEEEEEEPPSSELTLQELLGEERRNKNGPRVDPLEKELGVRTLDCRRPLIPFEEF
VNEPLNDVLEMDKDFTFFKVDSESKFSFQSCPFILNACTKSLGLYYDNRISMYSERRITA
LYSLVQGQQLNPYLRLKVRRDHIIDDALVRLEMIAMENPADLRKQLFVEFEGEQGVDEGG
VSKEFFQLVLEEMFNPDIGMFTYDESTKLFWFNPPSLENEAQFTLIGIVLGLAIYNNCIL
DVHFPMVVYRKLMGKKGTYLDLADSHPVQYQSLKELLDYEGDVEEDMMITFQISQTDLFG
DPITYDLKENGDKIPVSADNRKEFVSLYSDYILNKSVERQFKAFRRGFQMVTNESPLKCL
FRPEEVELLICGSRNLDFHALEETTEYDGGYNKDCRIIKDFWETVHSFGEEDKRLFLQFT
TGTDRAPVGGLGKLKMIIVKNGPDTDRLPTSHTCFNALLLPEYDTKEKLKERLLKAITYA
KGFGML
NT seq
2541 nt
NT seq
+upstream
nt +downstream
nt
atgaagagagcggctgcaaagcatctaattgagcgctactttcggcagttaacagagggc
tgtggaaatggggcctgcacgaatgagttgtgtgcttcgtgtcttggttttcaaccgctg
gatcacaacgcggcggccatcagagccttggagctctataaaattaacaccaaattatgt
gaccttcacccctccgctgccttccctgacaacagtgccgaggacacacaacctgcctta
ttgggcgactgccacgggaagatgacagacaacctgtttccccctagggaggacttcaga
gaggtgcgttacctgaccgaggagaaggtgtatgagatcctgagtatttgtgaggggaag
aaggactactctcctctgatccgagtcatcgggaggatcttctccaacgctgacgggctg
gtgcagagcttcaggaaagacaaggagcaacaccccaacaccaaggagcagcgtaagacc
caccaggccaaagatgaggacaaggacgaggacgacaaggagagaaccaccgccatggag
caggaatcagaggcctcggcgtccatggagggagcgacgggatcgacggagaacagactg
ggtcctgtggaggtctcagtggacatagaagctgtgaggagagtgtacaacagactcctc
tccaacgagaagatggaatcggccttcctcaacgccctggtctacctaactcccaatgta
gagctggatctaacctatctagacgtgtacgacaccaacccagactacctaaacatcttc
atcatcgtgatggagaacagcagcctccacagcccagagtacctggagatggccatgcct
ctgttctgtaagtgtatgagtaaactccctctgcctgccctggccaagctgacgcgcctg
tggtctcagtacagtgtagagcacatcagacgtatgatggagacctttcagcagctcatc
acctacacggtgatcagcaacgaatatgtcagcgacagtctggtaaacgacgacgagggc
gttgtggcggccaccaagtgtctgaagctggtgttctacgccaacgtgctgggaggtgac
ctcgatacgggccacaacgaagaggaggaggaggagcccccgtccagcgagctcaccctg
caggagctcttgggggaggagaggaggaacaagaacggtccccgggtcgatcctctggag
aaggagctgggcgtcaggaccctggactgcagacgacccctcatccccttcgaggagttt
gtcaacgagcctctgaacgacgttctagagatggacaaggacttcaccttcttcaaggtg
gactctgagagtaagttctccttccagagctgtcccttcatcctcaacgcctgcaccaag
agcctgggactgtactacgacaaccgcatcagcatgtacagcgagaggaggatcacagcg
ctctacagcctggtacaaggacagcagctcaacccatacctcaggctcaaagtacgccga
gaccacatcatcgacgacgccctcgtcaggttggagatgatcgccatggagaaccctgcg
gacctgaggaagcagctgtttgtagagtttgaaggagagcagggcgttgacgaagggggg
gtctctaaagagttcttccagctcgtcctggaggagatgttcaaccctgacattggcatg
tttacatatgacgagtccaccaagctgttctggttcaacccaccctctttggagaatgag
gcccagttcaccctgataggcatcgtcttgggcctggccatctacaacaactgtatcctg
gatgttcactttcccatggtggtctacaggaaactgatggggaagaaaggcacctatctg
gacctggcagactcacatccggttcagtaccagagtctgaaggagctgctggactatgag
ggggatgtggaggaggacatgatgatcaccttccagatctcacagacagacctgtttgga
gaccccatcacttacgacctgaaggaaaacggggacaagatacctgttagtgcggacaat
agaaaggagtttgtctctctgtatagtgattacatacttaataagagtgtggagcgccag
ttcaaagccttcaggaggggcttccagatggtcaccaacgagtcgcctctcaagtgttta
tttagacctgaggaagtggagctactgatctgtggaagcaggaatttagactttcacgca
cttgaagaaacaacagagtatgacggaggctacaacaaagactgtcgcattatcaaagac
ttctgggagacggtgcattcgtttggtgaggaggataagagactgttcctccagtttact
acggggactgacagagcacccgtaggaggcctgggcaagttaaagatgatcatcgtcaag
aacggccccgacacagacaggttacctacttctcacacgtgttttaatgccttgctgctc
cctgaatacgacacaaaggagaagctgaaggagagacttctcaaagccatcacttatgcc
aaaggatttggaatgctgtga
DBGET
integrated database retrieval system
