Oncorhynchus mykiss (rainbow trout): 110520827
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Entry
110520827 CDS
T07259
Symbol
chd2
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 2 isoform X1
KO
K20091
chromodomain-helicase-DNA-binding protein 2 [EC:5.6.2.-]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
omy03036
]
110520827 (chd2)
Chromosome and associated proteins [BR:
omy03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
110520827 (chd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
CHD1-like_C
Helicase_C
Chromo
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
110520827
NCBI-ProteinID:
XP_021453922
Ensembl:
ENSOMYG00000032649
LinkDB
All DBs
Position
1:complement(30303619..30336415)
Genome browser
AA seq
1825 aa
AA seq
DB search
MMKNKNKKQEDEGSTQSNASSNSASEESNHSGLESGSQSESEHGRERRRLHHSGESNSSS
ESGSQSGSESESQQASAEVKDRQPVKKKDNLSDVKKMWEEHPDVYGVRRSNRSRQEPARL
NIGAGGSSDSEGESPKRKASRQKKKENTWKSDESDDDDDDDEEEEDASSADSEQEEKKVR
SRRLPARRPKNKSSTVKKQQPPKGRKTRKQESSVEEDDDDDDDDDDDDDDEDTPKRQTRR
RVSAKVSYKEDQNDFETDSDDLIEMEGAEVEPEDDSETIEKIMDTRTGKKGACGASTTQY
AVEENGDPGADFDPEKDEGEIHYLIKWKGWSYIHNTWESIDSLTQQKVKGLKKLDNFKKK
NDELTAWLSKASPEDSEYYNCQQELTTDLNKQFHILERVIATKTGKTQGLSDFPSHSHKN
GASSNEPEYLCKWMGLPYSECSWEDGALLGKKFQHCIDGFINRNSSKTVPSKDCKVSEVL
KQRPRFVALKNQPSYIGDENLQLRDYQLDGLNWLAHSWCRCNSVILADEMGLGKTIQTIS
FLSYMFHQHQLYGPSLVVVPLSTLTSWQREFDTWAPDMNVVVYLGDVMSRKSIRDYEWVC
HQTKRIKFNALITTYEILLKDKGVLGNINWAFLGVDEAHRLKNDDSLLYKTLIEFRSNHR
LLITGTPLQNSLKELWSLLHFLMPDKFENWEDFESEHGKGTDNGYQSLHKVLEPFLLRRV
KKDVEKSLPAKVEQILRVDMSAVQKQYYKWILTRNFRALQKGTRGSSSGFLNIVMELKKC
TNHGFLIKQPEEECDTPQEHLQALVRGSGKLVLLDKLLTRLRDRGNRVLIFSQMVRMLDI
LAEYLALKRYPFQRLDGSIKGEIRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTV
VIFDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDIIERAKKKMVLDHLVIQR
MDTTGRTVLDNNSGNSNSNPFNKDELTAILKFGAEDLFKEAEGEETEPTEMDIDEILRLA
ETRESDQGSSATDELLSQFKVANFSNMEESAPEMVERMVPDWDDIIPEDQRRRLEEEQKQ
KEMEDIYMLPRSRSSNKRAQANDSDSDVGSKLKHRSSGSESETDDSGDDKKPKRRGRPRA
RKNNVEGFTDAEIRRFIKAYKKFGAPLERLEGIARDSELVDKSQADLKRLGELIHSSCVT
AVQEHEEHLRENPSEAKGPGKRRGINIKISGVQVNAKSIIQHEEEFEPLHKAVPANPTER
NQFQLTCRVKVPHFDVDWDLQDDTQLLLGVYEHGYGNWDLMKTDPDLKLADKILPDDPEK
KPQGKQLQARSDYLLKMLKKEADCKDVTKEEAKVKKRKPRVKKENKAPKDEQGNDISSPR
MSDNPSEEGEVRDDGTEKTPTKKRQKKKDNKENKEKHGTPKKEKDADKDKKRPKPKKEKA
KGAKGKKPQGPVHITAGSDPVPIGEEDDELDQENFSICKERMRPVKKALKQLDKPDEGLS
VQEQLQHTRTCLLKIGDRITECLKAYSDPEHVKTWRRNLWIFVSKFTEFGARKLHKLYKM
AQKKRSREEEKEHRKKGDDPSGRKKTFRAEASGSSRDSTGTQPSSKSHPGMPHPSPTSPH
GPHREGYNQSNKRHFGNDDRGDWQRDRKYNYPGNSNQPWQSERHHPYDAHRYKDHHYGDR
RPREDSYRSSSSSYRSGGSSSSPRKRPYDQYDSDREHRDRRAYYDRHPDSKRRRGDDFRP
PQDFRGSGGHPQDFRVRMPEHRGPPGPAGPEHFTRPYPDNKPPPLLDPRSPQAQKSPQDS
RSPTAERTAEQKAAAADLNWNNRKT
NT seq
5478 nt
NT seq
+upstream
nt +downstream
nt
atgatgaagaataagaataaaaagcaagaagatgaaggttcgactcaaagcaatgcatca
agcaattcggcctcagaagaatcgaaccactctgggttggagtctgggagtcagtcggag
agtgagcacggcagggagaggagaagattgcaccactcaggagagtccaacagctcttct
gaatctgggagccagtccgggtctgagagtgaatcccagcaggcctcggcagaggtcaag
gacagacaaccagttaaaaagaaagacaatctgtcagatgtgaagaagatgtgggaagag
catccagatgtctatggggtcaggcgatcaaatcgcagtagacaagaacctgctcgtctc
aatattggagctgggggtagcagtgactccgaaggtgaaagtcctaaaagaaaagcatca
cgacagaagaagaaagaaaatacctggaaaagtgatgaatcggatgatgatgatgatgat
gatgaggaggaggaggatgccagcagtgcagacagtgagcaggaagagaaaaaagttaga
tccagacgacttcctgctagaagaccaaagaacaaatcatctacagtcaaaaaacagcag
cctccaaagggaaggaaaaccaggaaacaagagtcatctgtggaggaagatgatgacgac
gacgatgatgatgatgatgatgatgatgacgaagataccccaaagagacaaacccggcga
agggtgtctgctaaagtcagttacaaggaggaccaaaatgactttgagactgactctgac
gacctgatagagatggagggagctgaggtggagccggaagatgacagcgagaccattgag
aagatcatggataccaggacaggcaaaaaaggagcctgcggggcttccactacccagtat
gctgttgaggaaaatggggacccaggagccgactttgacccagagaaggatgagggagag
atccattacctgatcaagtggaaaggctggtcctacatccacaacacctgggagagcatc
gactccctcactcaacagaaggtcaagggactcaagaaactagataacttcaagaagaag
aacgatgagctcactgcttggttgagcaaagcatcccctgaggattcagaatattacaac
tgccagcaagagctaaccactgatttaaataagcagttccatattctggagagagtcatt
gcgactaaaaccgggaagacacagggtctctcggattttccttctcacagccacaagaat
ggtgcttcttccaatgagccagagtacctgtgtaagtggatgggcctgccttattcagag
tgcagctgggaggatggagctctgctggggaagaagttccagcactgtatagacggcttc
atcaacaggaactccagtaaaacagtcccctccaaagactgcaaagtgagtgaggtgttg
aaacagaggcccagatttgttgcactaaagaaccagccatcgtacattggggatgagaac
ctgcagctgagagattaccagttagatggactgaactggctggctcactcctggtgcagg
tgcaatagtgtgatcctggctgatgagatgggtctggggaaaaccatccagaccatctcg
ttcttgtcctacatgttccaccagcaccagctgtatgggccctccctggtggtggtaccc
ctatccaccctcacctcctggcagagagagtttgacacctgggcccccgatatgaacgtg
gtggtctacttgggagacgtgatgagcaggaaatcgatccgtgactatgagtgggtatgc
catcagacgaagagaataaagttcaatgcacttataaccacgtatgaaattctactgaaa
gacaagggggtgttggggaacataaactgggctttcttgggtgtggacgaagctcacagg
ctaaagaatgacgactccctgttgtacaaaaccctgatcgagttccggtccaaccacaga
cttcttatcacagggacaccactgcagaactctctcaaagagctgtggtcccttctgcac
ttcctcatgcctgacaagtttgaaaattgggaagattttgaaagtgagcatggtaaaggg
actgacaatggctaccagagccttcacaaagtccttgagcccttcctcctgaggcgtgta
aagaaggatgtggagaaatccctgcctgccaaggtagaacagatcctccgtgtggacatg
tctgctgtgcagaagcagtactacaagtggattctgaccaggaacttcagagccctgcag
aaaggcacccgaggcagctcctctggcttcctcaacatcgtcatggagctgaagaagtgc
actaaccatggtttcctcatcaaacagcctgaggaagagtgtgacactccacaggagcac
ctgcaggcgttggtgaggggcagtgggaagctggttcttctggacaagctactgaccaga
cttcgggacaggggcaacagagtcctcatcttctcccagatggtgcgcatgttggacatc
ctggctgagtacctggccctgaagcgctacccattccagcgcctggatggctccataaag
ggagaaatacgaaaacaagcacttgaccactttaatgctgaaggttctgaggacttctgt
ttcctgctgtccacaagagctggaggtttgggtatcaaccttgcctctgcagacactgtg
gtcatctttgactctgactggaaccctcagaatgacctgcaggctcaggccagggctcac
aggattggccagaagaagcaggtgaatatctatcgcttggtcacaaagggatctgtggag
gaagacattattgagagagccaagaagaagatggttttggaccatcttgtaattcagaga
atggacaccactggccgaactgtattggataacaactccggaaattcaaactccaaccca
ttcaataaagatgagctgactgccattctgaagtttggagctgaagatctgttcaaagag
gcagaaggggaggagactgaacctacggagatggatattgatgagatcttgcggttggct
gaaaccagagaaagtgaccagggatcaagtgccacagatgagcttctctctcagttcaag
gtggccaacttctccaacatggaggagagtgctccagagatggtggagcggatggtgcct
gactgggacgacatcatcccggaggaccagcggcggaggctggaggaggagcagaagcag
aaggagatggaggacatctacatgctgcctagaagcaggagctccaataagagggcccaa
gccaacgacagtgacagtgacgttggctccaagctgaagcaccgctcctcgggctccgag
agcgagacggacgacagcggcgatgacaagaagccaaagaggagaggcaggcccagagcc
cgcaagaacaacgtggagggttttactgatgcagagatccgcaggttcatcaaggcttat
aagaaatttggagctccgcttgaaaggctggagggcattgcccgggactcagagctggtg
gacaaatcccaggcagacctgaagagactgggcgagctgatccatagcagctgcgtgacg
gctgtccaagagcatgaagagcacctcagagagaatcccagtgaagccaaaggccctggg
aagcgcagaggtattaacatcaagatctcaggagtgcaggtcaatgccaagtccatcatt
cagcacgaggaggagtttgagccactgcacaaagctgtgccagctaatcctactgagaga
aaccaattccaactgacctgcagagtgaaggtgcctcactttgacgtggactgggatctg
caggatgacactcaactgttgctgggggtctatgagcatggctacggaaactgggatctg
atgaagaccgaccccgatctcaaactcgcagacaagattctcccagatgacccagagaag
aaacctcaagggaagcagttgcaggccagatcagactaccttctgaagatgctgaagaaa
gaagcggactgtaaagatgttactaaggaggaggccaaagtgaagaagaggaagcctcgg
gtgaagaaagagaacaaggcccctaaagatgaacagggcaatgacatctcctccccccgc
atgtcagacaacccctcagaggaaggggaggtgagggatgacgggactgaaaaaactccc
acaaagaagaggcagaagaaaaaggataacaaagagaacaaagaaaaacacggaactcct
aaaaaagagaaggacgcggacaaagacaaaaaacgtccaaagccaaaaaaagaaaaggca
aaaggagctaaagggaagaagccccaggggccggtccacattactgctgggagtgatcct
gttcccatcggagaggaggacgatgagctggaccaagagaacttcagcatatgtaaggag
cgcatgaggccggtgaagaaggccctaaaacagctggataagcctgacgagggcctgtct
gttcaggagcagctccaacacacacgcacctgcctgctgaagataggagaccgcatcact
gagtgccttaaagcctacagcgacccagagcatgtcaaaacatggcgtcggaacctctgg
atttttgtgtctaagttcacagaatttggagcgaggaagcttcacaagctgtacaagatg
gctcagaagaagcggtctcgggaggaggagaaggagcatagaaaaaagggggatgacccg
tcaggcaggaaaaagactttccgagcagaggcgtctggttccagtcgagactccaccggc
acccagccatcgtccaagtctcatccaggcatgccccacccctctccaacgtccccccat
ggtccccacagagaaggctacaaccagtccaacaagcgacactttggaaatgatgatcga
ggagattggcagcgagatcgtaaatacaactaccctggaaatagcaaccagccctggcaa
agcgagcggcatcatccatatgacgcccatcggtataaggaccatcactatggtgaccgt
cgtccgcgtgaagactcctaccgcagcagctctagtagttaccgtagtggcggcagcagc
agctcccctcggaagaggccgtatgaccagtatgacagcgaccgagaacacagggaccgt
cgtgcctattacgacagacatccagactcaaagcggagacgcggcgatgacttccgtcct
ccccaagatttcagggggagtggaggccatccccaagacttcagggtgaggatgccagag
catagggggcccccggggccagcagggccagaacacttcacccggccctatccagacaac
aaacccccccccctgctggacccacgctccccacaggcgcagaagtccccccaggactca
cgctcgccaactgcagagcggactgcagagcagaaagcagctgcggctgatttaaactgg
aacaacaggaagacatga
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integrated database retrieval system
