Oncorhynchus mykiss (rainbow trout): 110520836
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Entry
110520836 CDS
T07259
Name
(RefSeq) uncharacterized protein LOC110520836 isoform X1
KO
K23283
RUN and SH3 domain-containing protein 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520836
Membrane trafficking [BR:
omy04131
]
SNARE
SNARE associated proteins
Others
110520836
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RUN
SH3_1
SH3_9
SH3_2
Motif
Other DBs
NCBI-GeneID:
110520836
NCBI-ProteinID:
XP_036823776
LinkDB
All DBs
Position
3:8772336..8800464
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AA seq
2029 aa
AA seq
DB search
MHSSSRTFAPPLRPRRIDTSRRTTTAAEPKPHGPVSQREDKNMNTSSSPRRATKATPESS
RTRVGVQPRAPLGQSRLGLQRNTAPLSTTKPKSVRAAAAVSKRAPLPALPHLDPNCNEPS
LPCLCCDGHSPQDNNSLFNHNHNNNNTISIRQQLKLQPPPPPPLLPQRQEGTGGKTKTQA
SPSQPQPQVLAPACPPNALELEKGTQVEENADVNKNTDVVIDNKKETEEEMDDKKETEEE
EENSVDVEVDDEEEGDDDDDDDTLVPSCCDCPPSLLDLSLTSSTSSSSTSISSCSDLESD
CADLSTSLSSSDHKWNADLSISQDHTHIHVPERYPASRSPPVLLLNPKPPSVSRCPSSPP
HACSPDEGYPSAPASPSSSDYLGVKGQTGLGSDVTKLGLLDFLESVGDFGKMERFSQVIQ
VARWDLEGDPQGDLLRDRLDHLDRLESVNRQVKLAHITRLHEKGLDLGDLGKEDLSDVLD
EMGNVDMSWKLYKGRGGSLGDSQEFSDAGVDLTAPSDCDEPLTSSPIELPPRPPKPPARY
ASVNSELHTYINISRDITPSVSVCTSPSSSPTFYTFRCEKALPPSPRSIPPPLLCQPIPY
FTLYKSSSLPFSLPSSTPPIPPPRRKHLARKEAQRLATLQAGCGKTPLSLSPPTSRLPPF
PPAPTISISNSTTPLAIPPPPSLPPPPSFHALDDEIRKLLVLAGLTQAELLKLSPELGVC
VGGLEEEGEGETHHTSRPGQTHDSGMRRKEEKAKEQYDIDGLAVDGWRDGGGRSEVERDR
ETDIFGGVKEGEKEESRDVFRTTSFTDMARRRKRNSGFGANVSLASDSYYSTGNTNTSNN
VNFETFKYSPVLSETPPPPPPRPLPPVPPTLPPLKVCTLLANSLRPERFDWLMAFSPDGE
TLTLPPPLEVRKSNEETLKKSTSGSTSGSGSKVMTFKELRNRSKHSSPAYQLITEPDPDP
TVITPDPDFLYNLKWRREKTDSDGIQWEYTSQAQATFLQPPPLTSLAAFREMFQKAEDAI
GHPELCPSQRIGCSASEGNLWRMDGQRKEEGEKRKEEVEEEEVEVRGTADGGRTWESRTT
VSSPPLSLAHSQPSSYFLHSVIPPYHPGYCGAHTRPVPRTQPHSHTEVQSMAPNPYTTQS
TAPNPYTTQSTAIGPNSYTNQSTTPNPYTNQSTTPNPYTTQSMAPNPYTTQSTAIGPNSY
TTQSTTPNPYTTQSTTPNPYTTQLSNPFATPYSHTDLNEDSHGTYSENDIDSGYSDYFKK
DGGLDSAHRFGKDFKSNIDSLYRYVNESKTKEKLEYGFVSESITDFDSLYCTTNVTQPHT
GSHTLVSNDTHTQGCTTPYKNVDAMMMAYAKTHTVGSLGRTDTHTHTHTSHPGQSRTSKD
LPPLPTWYLYHPKNCPIHRGAPPRLSPIGALDPPYRSGAPPPGLDASCLSSPLFPRSHTL
PALAAPLYYPFLYPPIPPRKTSDPPKLIQTPPLPPALTVRSVSFAGSVQRGEISWMGDDV
KAPLRGLGLSSLCLLEKRALVSAVSVAVEAILAQFSSSRTLVQKSASINKALSGDSSVNP
SLGRLVLQCLCPALRSLLSDGLKPHQSDLILGRRPNSAWGLVQASTRPGRNSGAQYRGPS
TQSLYSLQARIGELPQLRQNKHRFNAFLLGLLNIKLMDFWLSHLQSCSDVLVTFYQPSSF
MRLSLTSCQPLFEELLLLLQPLSLLTLNLDLLFQHHHLDPANHSPEIPSPPNQDLRFRLS
PRGSASQGSGSSYLESLSELDFGRAEPEATNHNASSSSLANSGVGGLVESLKPASLSVGP
AKVSGGLAETSPQLMWVQEKEIRELAPPNVEEASLSQQAGQVIQQGWGAVVRWGGKLGQN
LAELSLSAVQNQEGTSRDPPEPQTSTQARSDPPQVDGALAVPWGLGRLFGASNNSTIPTL
PTRRPSQWLSPGVSVLTRMVSSSSSANQRRALEPQQVEEVLEREMETWDNPRPLRSVRTL
CDHSGTGAELSFQKGEELVVLGCVDQDWIRCRQGDREGLVPIGYASLIL
NT seq
6090 nt
NT seq
+upstream
nt +downstream
nt
atgcactcctctagccgaaccttcgctccgcccttgaggcctcgtcgtatcgacacgagc
aggcggaccaccaccgcagcggaaccaaagccacacggccctgtttcccagagggaagac
aaaaacatgaacacctcttcctctcctcggcgcgccaccaaagcgacccctgagtcttcc
aggaccagggtgggggtccagcctcgtgcccccttgggtcagtccagattgggcttacag
agaaacacagctcccctctctacgaccaaacccaaaagtgtccgtgcagcagcagctgtg
tcgaaacgcgcccctcttcctgctcttcctcatctggaccccaattgtaatgaacccagc
ctgccttgtctgtgttgcgacggccattccccccaggacaataacagtctgttcaaccac
aaccacaacaacaacaataccatctccatcagacagcagctgaagcttcagccccctcca
ccacctcccctgctaccccagagacaggaggggacagggggcaagaccaagacacaggcc
agcccctctcagccccagcctcaggtcctggccccagcctgcccccctaatgccctggaa
ctggagaaaggaacacaagttgaggagaatgcagatgttaacaagaacacagatgtggtc
atagacaacaagaaagaaacggaggaagagatggatgacaagaaagaaacagaggaggaa
gaggaaaacagtgttgatgttgaagttgatgatgaggaggagggagatgatgatgatgat
gacgacacgttggtcccatcgtgctgcgactgccctccctctctcctggatctctccctg
acctcctccacctcctcatcctccacttccatcagctcctgctccgatctggagtcagac
tgcgccgatctctccacctctctctcgtcctctgaccacaagtggaacgctgatctgtca
atttctcaggaccacactcacattcatgttcctgaacgctacccagcctcccgttccccc
cctgtcctgctcctcaaccccaaacccccttctgtctctcgttgcccttcctccccccca
cacgcctgctccccagacgagggctacccctccgcccccgcctccccctcctcctccgac
tacctgggggtcaaaggtcagacaggcttagggtcagatgtcaccaaactaggcctcctg
gacttcctggagtcagtgggagactttggaaagatggagcgctttagccaggtgattcag
gtggctcgctgggacctggagggggatcctcagggggatctactgagggatcgactggat
cacctggaccgactggagagtgtcaacaggcaggtgaagctggcccacatcaccaggctc
catgagaagggactggatctaggcgatctgggcaaggaggatctctctgatgttctggat
gagatggggaacgtggatatgtcttggaagctgtataagggccggggagggtctttggga
gattcccaggagttctctgatgctggagtggacctgacagcaccttcagactgtgacgag
cccctgacctcttcgcccatagagctcccaccgagaccccccaaaccccctgcccgctat
gccagcgtgaactctgaactccacacctacatcaacatcagccgtgacatcaccccctcc
gtctctgtctgcacctctccatcctcatcccccactttctacaccttcaggtgtgagaag
gccctccctccttccccacgctccatcccccctcctcttctctgtcagcccatcccttac
tttactctctacaaatcatcctctctcccattctccctcccctcctccactccccccatc
cctccccctcggaggaagcacctagcccgtaaggaggctcagcgtctcgccaccctccaa
gcaggatgcgggaagacccccctgtccctctcccctcccacctctcgcctccctcctttc
ccccctgcccccaccatttccatctccaactccaccaccccccttgccatccctcccccg
ccctctctcccccctcctccctctttccatgcgttggatgatgagatccgtaagctactg
gtgctagcaggactgacccaggctgagctcctcaaactcagcccagagctgggggtttgt
gtggggggactggaggaggagggagagggggagacccaccacacctccaggcctggacag
acacatgatagtgggatgaggagaaaagaggagaaggctaaggagcagtatgatatagat
gggttggctgtggatggatggagagatggaggagggaggtcagaggtggagagggataga
gagactgatatatttggaggagtaaaggagggagagaaagaggagagcagagatgtgttt
agaaccacgtctttcactgacatggcgagaaggaggaagagaaacagcgggtttggggct
aacgttagcctagcatctgactcctactacagcactggcaataccaacacctctaacaat
gttaacttcgagactttcaaatattcccctgtgctctcggaaacccctccccctcctcct
ccgcgtcccttaccccctgtcccccctaccctgccccccctcaaagtttgcacccttctc
gccaactctttacgccctgagcgatttgattggctcatggctttctcccccgatggtgaa
accctgaccctgcccccgcccttggaagttagaaaatccaatgaggaaaccctgaagaaa
tctacttccgggtcaacgtcagggtcgggttcaaaagtgatgaccttcaaggaactgcgt
aaccgtagcaaacacagctccccggcataccaactaataactgaaccggatcctgatcct
acagtcataacccctgaccctgacttcctctacaatctcaagtggaggagggaaaagacg
gacagcgacggaatccaatgggagtacacctcccaggcccaggccaccttcctgcaacca
cctcccctcacctcattggctgcttttagggaaatgttccagaaagcagaggatgctatt
ggacaccccgagttatgtccctcgcagcggattgggtgctcagccagtgaagggaacctg
tggaggatggatggacagagaaaagaggagggagaaaagaggaaagaagaggtagaggaa
gaagaggtggaggtgagaggaacagctgatggaggaagaacctgggagtcaagaactaca
gtgtcctcaccccctctctccctggcccactcccagccctcctcatatttcctccactct
gtaatccccccttaccacccaggatactgtggtgctcatacgagaccagtccccaggacc
caacctcatagccacactgaagtccagtccatggcccctaacccctacactacccagtcc
acggcccctaacccctacactacccagtccacagccataggtcctaactcctacactaac
cagtccacgacccctaacccctacactaaccagtccacgacccctaacccctacactacc
cagtccatggcccctaacccctacactacccagtccacagccataggccctaactcctac
actacccagtccacgacccctaacccctacactacccagtccacgacccctaacccctac
actacccagctatctaacccctttgctacaccatacagtcacacagatttaaatgaagac
agccatggaacttattctgagaatgatattgattctggatatagtgactattttaagaag
gatggaggcctagactctgcacatcgttttggaaaggacttcaagagcaacattgatagt
ttgtatcgttatgtgaatgagtccaagactaaagaaaagctggagtatggctttgtctct
gaatccatcactgactttgactccctctactgcaccactaacgtcacacagcctcacacc
ggctcacacacactcgtcagcaatgacacacacactcaaggctgcaccaccccatataaa
aacgttgacgcgatgatgatggcatatgccaaaacacacactgtcggttcccttggtcgc
actgacacacacacacacacacacacctctcaccctggccagagcagaacctctaaagat
ctccctcccctccctacctggtacctctaccaccccaaaaactgtcccatccacaggggt
gcccctccccgcctctcccccatcggggctctcgaccccccctatcgctctggggccccc
cctccgggcctggatgcgtcctgcctcagctcacccctgttcccccgctctcacaccctc
cctgccctggccgcccccctctactaccccttcctctacccccctatcccccccaggaaa
acctcagaccccccaaaactcatccagactccgccgctgccgcccgcactgacggttcgt
agcgtctcatttgccggctctgtacagagaggcgagatttcctggatgggcgatgacgtg
aaggcccctctgagaggcctagggctgtcctctctgtgcctgctggaaaaaagagctctg
gtcagtgcagtcagtgtggcagtggaggccattttggctcagttcagctcctcacggacc
ctggtgcagaagtctgcctccattaacaaggctctatcaggagacagcagtgtgaatccg
tctctgggccggctggtgctgcagtgtttgtgccccgccctgcggagcctgctctccgat
ggcctcaagccccaccagagtgatttgatcttgggcaggaggccaaactcagcctgggga
ctggtccaggcctccaccaggccaggtaggaactctggagcgcagtacagagggcccagc
actcagtccctgtacagcctccaggctagaataggagagctgccccagctccggcagaac
aaacacaggttcaacgccttcctcctcggcctcctcaacatcaagcttatggatttctgg
ctgtcccatctccagtcatgcagtgatgtgttggtgacgttctaccagccctcttccttc
atgcgtttgtcattgacttcctgccagcctctgtttgaggagctcctcctcctgctgcag
cccctcagtctcctgacccttaacctcgacctgctcttccagcaccaccacctggatcca
gccaatcacagcccagagatccccagcccacccaatcaggacctgaggttcaggctctcg
ccccgggggtccgcttcccaaggcagtggcagcagctatctcgagagcctatcagagctg
gactttgggagagcagaacccgaggcgaccaatcataatgcgagctcgtcgtccctggcc
aactcaggggtgggagggttggtggagtcactgaagccagcgagtctcagtgtggggcct
gcaaaggtctctgggggtcttgcggagacaagtcctcagctgatgtgggttcaggagaaa
gaaattagggagctagcacctcctaatgttgaggaggccagtctctcccaacaggcagga
caggtgatccagcagggatggggggctgtggtacgctgggggggcaagctgggccagaac
ctggctgaactcagcctgtctgcagtacagaaccaggaggggacatccagagacccccca
gagccccagaccagtacccaggccaggagtgaccctcctcaggtcgatggagcattggcg
gtcccctggggtttgggacggctgtttggagcctccaataactccacgatacccacactt
ccaaccagacgtccgtctcagtggttgtctccaggggtgtctgttctgacccggatggtg
agcagcagttccagcgctaaccagaggagggcgctggagccccagcaggtagaagaggtg
ttagagagagagatggagacatgggacaacccaagacccctcaggtcagtcagaacacta
tgcgaccactctggcacaggggcggagctaagcttccagaaaggggaggagttagtggtt
ttagggtgtgtcgatcaggactggattcgctgtcgtcagggagaccgagaggggctcgta
cccattggctacgcctcactgatcctgtga
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