KEGG   Oncorhynchus mykiss (rainbow trout): 110520863
Entry
110520863         CDS       T07259                                 
Symbol
efna1b
Name
(RefSeq) ephrin-A1
  KO
K05462  ephrin-A
Organism
omy  Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010  MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:omy00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    110520863 (efna1b)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04052 Cytokines and neuropeptides [BR:omy04052]
    110520863 (efna1b)
   00536 Glycosaminoglycan binding proteins [BR:omy00536]
    110520863 (efna1b)
   00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:omy00537]
    110520863 (efna1b)
Cytokines and neuropeptides [BR:omy04052]
 Cytokines
  Growth factors (RTK binding)
   110520863 (efna1b)
Glycosaminoglycan binding proteins [BR:omy00536]
 Heparan sulfate / Heparin
  Axon guidance molecules
   110520863 (efna1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:omy00537]
 Others
  110520863 (efna1b)
SSDB
Motif
Pfam: Ephrin
Other DBs
NCBI-GeneID: 110520863
NCBI-ProteinID: XP_036823537
Ensembl: ENSOMYG00000000491
LinkDB
Position
3:8148407..8159396
AA seq 235 aa
MDLVWLVCLAVSFGTWFASAERHSVFWNSTNPNFLWDEYTVEVKINDYLDIICPHYTRGE
LPSQEAERYVLYMVEKEDYEVCKPHSFDQLRWECSRPFAAHAPERFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLKVDVVGPHGSGKAKADKDKDGAMEEVMDEGKGKMG
GGGGGVHNPSNRLPADDPTVLEPKVQKSVGSSGVQLVSLSVFFTLFPVLLSLLLY
NT seq 708 nt   +upstreamnt  +downstreamnt
atggatttggtgtggctggtgtgtttggctgtgagcttcggaacctggttcgcctctgca
gagagacatagcgtcttctggaatagcaccaacccaaatttcctatgggatgagtacaca
gtggaggtgaaaatcaacgactacttggacatcatctgtcctcactacacgcgcggggag
ctgccatcccaggaggccgagcggtacgtgctgtacatggtggagaaggaggactatgag
gtgtgtaagccccactccttcgaccagctgcgttgggaatgttcccggcccttcgctgcc
cacgcccccgagaggttctccgagaagttccagcgcttcacccccttcaccctgggcaag
gagttcagacagggagagagctactactatatctccaagccgctgcatcaccacggccag
gagtgtctgagactgaaggtggatgtggttggacctcatggttctgggaaggccaaggct
gacaaagacaaggatggagcgatggaggaagtgatggatgaaggaaagggaaagatgggg
ggaggaggaggaggagtgcacaacccctccaacaggcttccagccgatgaccctactgtg
ttggagcctaaggttcagaagagtgtgggtagttcaggtgttcagctggtctccctgtcg
gtcttcttcaccctgttccccgtcctactatccctgttattatattga

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