Oncorhynchus mykiss (rainbow trout): 110520863
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Entry
110520863 CDS
T07259
Symbol
efna1b
Name
(RefSeq) ephrin-A1
KO
K05462
ephrin-A
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04010
MAPK signaling pathway
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
110520863 (efna1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
omy04052
]
110520863 (efna1b)
00536 Glycosaminoglycan binding proteins [BR:
omy00536
]
110520863 (efna1b)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
110520863 (efna1b)
Cytokines and neuropeptides [BR:
omy04052
]
Cytokines
Growth factors (RTK binding)
110520863 (efna1b)
Glycosaminoglycan binding proteins [BR:
omy00536
]
Heparan sulfate / Heparin
Axon guidance molecules
110520863 (efna1b)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
omy00537
]
Others
110520863 (efna1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ephrin
Motif
Other DBs
NCBI-GeneID:
110520863
NCBI-ProteinID:
XP_036823537
Ensembl:
ENSOMYG00000000491
LinkDB
All DBs
Position
3:8148407..8159396
Genome browser
AA seq
235 aa
AA seq
DB search
MDLVWLVCLAVSFGTWFASAERHSVFWNSTNPNFLWDEYTVEVKINDYLDIICPHYTRGE
LPSQEAERYVLYMVEKEDYEVCKPHSFDQLRWECSRPFAAHAPERFSEKFQRFTPFTLGK
EFRQGESYYYISKPLHHHGQECLRLKVDVVGPHGSGKAKADKDKDGAMEEVMDEGKGKMG
GGGGGVHNPSNRLPADDPTVLEPKVQKSVGSSGVQLVSLSVFFTLFPVLLSLLLY
NT seq
708 nt
NT seq
+upstream
nt +downstream
nt
atggatttggtgtggctggtgtgtttggctgtgagcttcggaacctggttcgcctctgca
gagagacatagcgtcttctggaatagcaccaacccaaatttcctatgggatgagtacaca
gtggaggtgaaaatcaacgactacttggacatcatctgtcctcactacacgcgcggggag
ctgccatcccaggaggccgagcggtacgtgctgtacatggtggagaaggaggactatgag
gtgtgtaagccccactccttcgaccagctgcgttgggaatgttcccggcccttcgctgcc
cacgcccccgagaggttctccgagaagttccagcgcttcacccccttcaccctgggcaag
gagttcagacagggagagagctactactatatctccaagccgctgcatcaccacggccag
gagtgtctgagactgaaggtggatgtggttggacctcatggttctgggaaggccaaggct
gacaaagacaaggatggagcgatggaggaagtgatggatgaaggaaagggaaagatgggg
ggaggaggaggaggagtgcacaacccctccaacaggcttccagccgatgaccctactgtg
ttggagcctaaggttcagaagagtgtgggtagttcaggtgttcagctggtctccctgtcg
gtcttcttcaccctgttccccgtcctactatccctgttattatattga
DBGET
integrated database retrieval system