Oncorhynchus mykiss (rainbow trout): 110520873
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Entry
110520873 CDS
T07259
Name
(RefSeq) sorting nexin-27 isoform X1
KO
K17936
sorting nexin-27
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
omy04131
]
110520873
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
omy04990
]
110520873
Membrane trafficking [BR:
omy04131
]
Protein recycling
Others
Others
110520873
Domain-containing proteins not elsewhere classified [BR:
omy04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
110520873
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
PDZ
RA
PDZ_6
SNX17-27-31_F1_FERM
RA_2
VirE3
SNX17-31_F2_FERM
SNX17_FERM_C
PDZ_2
USP7_C2
DarA_N
Motif
Other DBs
NCBI-GeneID:
110520873
NCBI-ProteinID:
XP_036823664
UniProt:
A0A8C7V0U4
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All DBs
Position
3:8436132..8457492
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AA seq
570 aa
AA seq
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MADVEGEGINSVAPPLVQPSSPNGSGVSPTQGTGSCQTVTTVTSGPRLVRIVKSDSGYGF
NVRGQVSEGGQLRSINGELYAPLQHVSAVLPGGAADRAGISKGDRILEVNSVNVEGATHK
QVVDLIRAGERELMLAVLSVPPQEADCLDPGDDGSAQSCYDYSDKQAVPISVPTYKHAEL
NQERFVMYNVYMAGRQLCSKRYREFAILNQNLKREFANYTFPKIPGKWPFSLSEQQLDAR
RRGLEEYLEKVCSVRVIGESDVMQEFLSDESDENYNGVSDVELRIAMPDKTTVTVRVRKN
CTTDQVYQAVVMTVGMDSITASYFALFEVINHSFVRKLAPNEFPHKLYVQNYTSAVPGTC
LTLRKWLFTTEEEILLNDNQLAVSYCFHQAVDDVKRGFIKAEEKSYQLQKLAEQKKMAMY
LSMLRGCEGYNEIIFPHCSCDSRRKGHVVTAISIHNFKLHACTEEGTLENQVIVFEWVEM
QHWDTDEEGMAFCFQYARAEKKPRWVKIFTPYFNYLHECVERVFCELKWRKEVEEEAVDK
DNKNCSKEEYLPAVETQKEWRHLGGEIITS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtcgagggagagggaattaattcggtggcacctccgttagttcagccatcc
tcccctaacggctccggtgtcagcccaacgcagggcaccggcagttgccaaacggtgact
accgttacgtcaggcccgcgactggtgcggatagtcaagtctgattcgggatatggcttc
aatgtccggggacaggttagcgaaggaggacaactacggagcatcaacggggaattgtat
gccccgctacagcatgttagtgctgttttaccaggcggtgcagcggacagagccggtatc
tcgaaaggagaccggattctggaagttaatagtgtgaacgtggagggggcgacccataag
caggtggtggatctgatccgtgcgggggagagggagctgatgctggccgtgctgtctgta
cctccccaggaggctgactgtctggaccctggagacgacggctcagcccagtcctgctac
gactacagcgacaaacaggccgtccccatctccgtccccacatacaaacacgctgaactc
aaccaggagaggtttgtgatgtataatgtgtacatggcaggcagacagctgtgctctaag
aggtacagggagtttgctatcctcaaccagaacctgaagagagagtttgccaactacacc
ttccccaaaatacctggcaaatggcctttttccctgtctgaacaacaactagacgctaga
cgcaggggactggaggaatacctggagaaagtgtgttcagtgagggtgattggggagagt
gatgtcatgcaggagtttctgtctgacgagtctgatgagaactataacggcgtatcagat
gtggagttgaggatagccatgcctgataaaaccaccgtcacagtccgagtccgcaagaac
tgtacaactgaccaggtctaccaggctgtggtcatgacagtaggaatggacagcataaca
gccagctactttgctctgtttgaggtcatcaaccactcctttgtgcgtaaactggctcct
aatgagttcccccacaagctgtatgttcagaactacacatctgctgtccctgggacctgc
ctcaccctgcgcaagtggctcttcaccaccgaggaggagatcctgctcaatgacaaccaa
ctggccgtcagctactgcttccaccaggcggtggatgatgtgaaaaggggatttatcaag
gcagaggagaagtcctaccagctacagaaattagcagaacagaagaagatggccatgtat
ctcagtatgttacggggctgtgaaggctacaatgagatcatcttcccacactgctcctgt
gactcccgacgcaaaggccacgtcgtcacagccatcagcatacacaactttaaactgcac
gcctgcacagaggagggaacactagagaaccaggtgattgtgtttgagtgggtggagatg
cagcactgggacactgatgaggagggcatggccttctgcttccagtacgccagggcagag
aagaaacctcgctgggtcaagatctttactccctacttcaactacctgcatgagtgcgtt
gagagagtcttctgtgaactcaagtggaggaaagaggtggaagaggaggctgtggataag
gacaataagaactgcagtaaagaagaatatcttccagctgttgagacacagaaggaatgg
aggcacctaggaggagagatcatcacctcctaa
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