Oncorhynchus mykiss (rainbow trout): 110520934
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Entry
110520934 CDS
T07259
Name
(RefSeq) tropomyosin alpha-1 chain isoform X3
KO
K10373
tropomyosin 1
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy04260
Cardiac muscle contraction
omy04261
Adrenergic signaling in cardiomyocytes
omy04814
Motor proteins
omy04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
110520934
04820 Cytoskeleton in muscle cells
110520934
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
110520934
04261 Adrenergic signaling in cardiomyocytes
110520934
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
omy04812
]
110520934
04147 Exosome [BR:
omy04147
]
110520934
Cytoskeleton proteins [BR:
omy04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Tropomyosins
110520934
Exosome [BR:
omy04147
]
Exosomal proteins
Exosomal proteins of microglial cells
110520934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
Laminin_II
CLZ
TMF_DNA_bd
DUF3450
EzrA
DUF745
PUMA_CC
CENP-F_leu_zip
Crescentin
Lebercilin
GAS
Motif
Other DBs
NCBI-GeneID:
110520934
NCBI-ProteinID:
XP_021454063
Ensembl:
ENSOMYG00000043404
LinkDB
All DBs
Position
1:31323022..31343011
Genome browser
AA seq
284 aa
AA seq
DB search
MDAIKKKMQMLKLDKENALDRAEGAEGDKKAAEDKSKQLEDEISELEKKLRITEDERDKV
LDEFQAAEEKLLSAEEVATKAEADVASLNRRIQLVEEELDRAQERLTTALTKLEEAEKAA
DESERGMKVIENRASKDEEKMELQEIQLKEAKHIAEEADRKYEEVARKLVIIESDLERTE
ERAELSEGKCSELEEELKTVTNNLKSLEAQSEKYSHKEDKYEEEMKVLTDKLKEAETRAE
FAERSVTKLEKTIDDLEEKLAHAKEENLDMHQMLDQTLMELNNM
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggatgccatcaagaagaagatgcagatgcttaaactcgacaaggagaatgctttggac
agagctgagggagccgagggagacaagaaggcagcagaggacaagagcaaacagttagag
gatgaaataagtgagttggaaaagaaattgcggatcaccgaagatgagagagataaagtg
cttgatgaattccaagccgccgaggaaaaattgctgagcgccgaggaggtggccaccaag
gctgaggctgatgtcgcttcccttaacagacgtatccagctggttgaggaggagttggat
cgtgctcaggagcgtctgacaactgccctgaccaagctggaggaggctgagaaggcggct
gatgagtctgagagaggcatgaaggtcattgagaacagagcctccaaggatgaggagaag
atggagctgcaggagatccagctgaaggaggccaagcacatcgccgaggaggctgaccgc
aaatacgaggaggttgcccgtaagctggtcatcattgagagtgatctggagcgtacagag
gagcgcgctgaactttcagaaggcaaatgctctgagcttgaagaagagttgaaaactgtg
accaacaacctgaagtcactggaggcccagtctgagaagtactcacataaggaggacaag
tatgaggaggagatgaaggtcctcaccgacaagctgaaggaggctgagacacgtgctgag
ttcgctgagagatcagtaaccaagcttgagaagaccattgacgacttggaagagaaactg
gcacatgctaaagaggaaaaccttgatatgcaccagatgctggaccagactctaatggaa
ctaaataacatgtga
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