Oncorhynchus mykiss (rainbow trout): 110521052 Help Entry 110521052         CDS       T07259                                  Name (RefSeq) afadin isoform X1   KO K05702   afadin Organism omy  Oncorhynchus mykiss (rainbow trout) Pathway omy04517   IgSF CAM signaling omy04519   Cadherin signaling omy04520   Adherens junction omy04530   Tight junction Brite KEGG Orthology (KO) [BR:omy00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04517 IgSF CAM signaling     110521052    04519 Cadherin signaling     110521052  09140 Cellular Processes   09144 Cellular community - eukaryotes    04520 Adherens junction     110521052    04530 Tight junction     110521052 SSDB OrthologParalogGFIT Motif Pfam:  AFDN RA DIL PDZ FHA PDZ_6 RA_2 PDZ_2 RA_3 RASSF8-10_RA Yop-YscD_cpl Motif Other DBs NCBI-GeneID:  110521052 NCBI-ProteinID:  XP_036831679 Ensembl:  ENSOMYG00000002789 LinkDB All DBs Position 4:complement(17629230..17746634) Genome browser AA seq 1863 aa AA seqDB search MSGSREEERRKLADIINHWNANRLDLFEISQPTEDLEFHGVMRFYFQDRVAGNFATKCIR VSSTATTQDVIETLAEKFRPDMRMLSSPKYSLYEVHVSGEERKLDLDEKPLVVQLNWNKD DREGRFVLKNENDIIPKKMQSNGPEREKEGVIQNFKRTLSKKEKKKEKKREKEAHIPDGD EQALNREDGENSRLAAEVYKDMPENSFTRTISNPEVVMKRRRQQKLEKRMQEFRSSDGRP DSGGTLRIYADSLKPNIPYKTILLSTTDMADFAVVEALEKYGLEKENPREYCIARHTDDK SGKEIVLDDTECPLQIFRDWPNDRGALVFQLKKRPPDYVPKKGRKPEDKGLRGKGMDGPL YGSLPPEKLPYLVELSPGRGNHYGYYTYQHLEDGSDSRDKPKLYRLQHSVTEVGSDTTDD GSIQLFGPGILPHHCKLMHTEGLVTVTPHSLEAETYVDGQRVTETTVLRSGATLQFGASH VFKFVDPSYDHSMGKGGPGPMMRGRHKSGSVSETTFDLQGDIHSGTALPASKSSGKLDME RSANGSERGMVKPMIRGEQQDGRSQDILSPELTLPASIEFRDNSEDAFLSAIINYTNSST VHFKLSPTYVLYMTCRYVMSSHYRPDVSPSERTHKVIAIVNKMVSMMEGVIQEIPEGAQK QKNIAGALAFWMANASELLNFIKQDKDLSRITLDAQDVLAHLVQMAFKYLVQCLQSDLNN YMPAFLDDPEEQNPQRPKIEDVLHTLTGAMSLLRRCRVNAALTIQLFSQLFHFINMWLFN KLAMEADSGLCSHYWGAILRQQLSHIEAWAEKQGLELAADCHLSRIVQATTLLTMDKYSM QDVQNIHNTCFKLNSLQLNALMTNYHCAPDEPYIPPELIDHVVAVAENTADELARSDGRE VQLEEDPDLQLPFLLPEDGYSCDVVRNIPNGFQEFLDPLCQRGFCRLTPHPRSPGTWTIH FEGADCDSHFFADNSDLQMRKEPEVVTVTLKKHNGMGLSIVAAKGAGQDKLGIYIKSVVK GGAAEVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTRTGSVVTLEVAKQGAIYHGLATL LNQPSPMMPRALQGGRDKNGKLRPKSEGFELYNNSVQNGSPESPQGDWQAYPEPKKLSGE ERLLKNRADHRSSPNVANQSQSPGGNTVYPGGPGTKITSVSTGNLCADDEPSPPRPEAYP IPTQTYPREYFTIPASKSTDRMGPAAGQLYTDDRGPPGSMEDHHNSSIAIQRMGHSQEEL CDLPGGYPPAPLRPEDLVHLQQQQREADYQRGSGEHWVNHHQVSSSVESSTSSQEHLNYS SNKTQSNHKSGPGRWKTPGPIAPHPGPVAQATRTDLPPPPPPPVHYQDFDSQPDLPLPPP PSASQQQAAAADRKKREEQQRWYEKEKARLEEERERKRREQERKLGQVRNPSMPVAHNNN NQHGGTLPPPTQHYQMPPPQSPMPMQQVPLPYFPPQGQQQAQQQQPPRPEKLSTLPRATT LPPQGNPMDTVIRELLPQQQPRTIERRDLQYITISKAALSSSDSLSPDPWKRDAREKLEK QQQLHIVDLLDREIQDLQAKPERTAEESDRLRKLMLEWQFQKRLQESKQSDEEDEEDDDE DVDSMMIMQRLEAEKRARLQDEERRRKQQLEEIRKREAEDRAKQEEERRWREEERARREV DEKRRQEEEYYTRLEEGRRRQHEEAERKLLTPDEPGLYRPPLPRDYQPQPPPPTASPATT ATNAPPPPPQRNASYLKTQVVSPDALYTAKFVSYNDEEEEDAAGFHSYTGNTTGVLGSEE GYKDLREKWTKGGQEQENTLTGEAPESMTFKERQRLFSQGKEVSNKVKASRKLMELENEL NTK NT seq 5592 nt NT seq  +upstreamnt  +downstreamnt atgtcggggagcagggaggaggagcggcggaaactagctgacatcattaaccactggaac gccaaccggctcgacctgttcgagatcagccaacccaccgaggacttggagttccacggc gtgatgcgtttctacttccaggaccgcgtggcggggaactttgccaccaagtgcatccgc gtgtcctccacggccaccactcaggacgtcatcgagacgctggccgagaagttccggccc gacatgagaatgctctcctcgccaaaatactccctctacgaggtccacgtcagcggggaa gaacggaagctggacctggatgagaagccactggtggtgcagctcaactggaacaaagac gaccgcgagggacgcttcgtcctcaagaacgagaacgacatcatccccaagaagatgcag agcaacgggccggagagggagaaggagggagtaatccagaacttcaaacggacactgtcc aagaaagagaagaagaaggagaagaagagagagaaggaggctcacattccggacggagat gagcaagcactgaacagagaagatggagagaactccagactggcggcggaggtgtacaag gacatgccggagaacagcttcaccaggaccatctctaaccctgaggtggtgatgaagagg aggcggcagcagaaactggagaagaggatgcaggagttccgcagcagcgacggcaggccc gactcgggggggacgttgaggatctatgcagacagtctgaagcccaacattccttataag accatcctgctgtccacgacagacatggcagactttgctgtggtggaggccctggagaag tacggcctggagaaggagaacccccgggagtactgcatcgccaggcacacagatgacaag tctgggaaggagatcgtcctggacgatacggagtgtcctcttcagatcttcagagactgg cccaatgaccgaggagccctcgtgttccagctgaagaagagacctccagactacgtgcct aaaaagggccggaaaccagaggacaagggcctcagagggaagggcatggacgggcccctg tacggctctctacccccagagaaactgccttacctggtggagctcagcccagggagggga aatcactatggctactacacgtatcagcacctggaagacggctccgactccagggacaaa ccgaagctctaccgtctgcagcacagtgtcactgaggtgggctcagacacgacagacgac ggctccatccagctgtttggtccaggtatcctgccccaccactgcaaactgatgcacaca gagggtctggtgacagtgacgccacacagtctggaggctgagacctacgtggacggccag cgtgtcaccgagaccaccgtgctgcgaagcggagccacacttcagttcggcgcctcccac gtcttcaagtttgtcgaccccagctacgaccacagcatgggcaagggaggtcccggaccg atgatgagaggaaggcacaagtcagggagtgtttctgagacaacctttgacctgcaagga gacattcacagtgggacggccctccccgccagcaagagctcaggtaagctggatatggag cgttcagccaacggcagcgagagaggcatggtcaaacccatgatccgcggggagcagcag gacggcaggtcccaggacatcctgagcccagaactgacgctgccggccagcatcgagttc agggacaactccgaagatgcctttctgtcggctatcatcaactacaccaacagctccacg gtgcacttcaagctgtcccccacctatgtactgtatatgacctgtcgctacgtcatgtcc agccactaccggcccgacgtcagtccctcggaacgcactcacaaggtcatagccatcgtt aacaagatggtgagcatgatggaaggagtcatccaggagattcctgaaggggcccagaag cagaagaacattgcgggggccctggccttctggatggccaatgcctcagagctgctcaac ttcatcaaacaggacaaggacctgtcgcgcatcacactggacgcccaggacgtgctggca cacctcgtccagatggccttcaagtacctggtccagtgtctgcagtctgacctgaataat tacatgcctgcgtttttggatgacccagaggaacagaaccctcagaggcccaaaatagag gatgttctgcacaccctgacgggcgccatgtccttgctgcgccgttgccgtgtcaacgcg gcgctgaccatccagctgttctcgcagctcttccacttcatcaacatgtggctgttcaac aagctggcgatggaggccgactctgggctgtgttcacactactggggcgccatcctccgc cagcagctcagccacatcgaggcctgggcagagaaacagggcctggagctggccgccgac tgccacctcagtcgcatcgtacaggctacgactctcctcaccatggacaagtactccatg caggacgtgcagaacatccacaacacctgcttcaagctgaactccctgcagctcaacgcc ctcatgaccaactaccactgtgctcccgacgagccttacatcccccccgagctgatagac cacgtggttgccgtggcggagaacacggcagatgagctggcccgtagcgatggccgagag gtccagctggaggaggaccccgacctgcaactgcccttcctactgcccgaggacggctac tcctgcgacgtcgtgcgcaacattcccaacggattccaggagttcctggaccccctttgt cagagaggattctgtcggctaacccctcacccccgctcccctgggacctggaccatccac tttgaaggagccgactgcgacagccacttctttgcagacaactccgacctgcaaatgcgg aaggaaccggaagttgtgacggtcaccctgaagaagcacaatggcatgggcctcagcatt gtggctgccaagggtgctggacaggacaagctcgggatctacatcaagtctgttgtgaag ggaggtgcggctgaagtggacggtcgtctggctgcaggggaccagctgctgagtgtggac ggccgcagcctggtgggcctctcccaggagagggctgcagagttaatgacgaggacaggc tctgtggtgacactggaagtggccaaacagggtgctatttaccatggcctggccacactc ctcaaccagccttctcctatgatgcccagagcgttacaaggagggcgtgataagaacggt aaactgagaccaaagagtgaaggctttgaactgtacaacaactcagtccagaacggctct ccagagagcccccagggtgactggcaggcctacccagaaccaaagaagttgagcggggag gagagactactgaagaaccgggccgaccaccgctccagccccaacgtggccaaccagagt cagagtccaggaggaaataccgtctacccaggaggacctgggacaaagatcacctccgtc tccacgggcaacctgtgtgctgatgacgagccctctccacctcgtcccgaggcctaccca atccccactcagacctaccccagggaatacttcaccatcccagcctccaagtctacagac cggatgggcccggctgcggggcagttatacactgacgacaggggccctcctggctccatg gaagaccaccacaacagcagcatcgccatacagcggatgggccactctcaggaggagctg tgtgacctcccagggggctaccctccagcccccctgcgtcctgaggacctggtccacctg cagcagcagcagagagaggctgactaccagcggggcagtggggaacactgggtcaaccac caccaggtctcctcctccgtggagtcctccacctccagccaggagcacctcaactactcc tccaacaagacccagagcaaccacaagagtggcccaggacgctggaagacccctggcccc atcgccccgcacccaggccccgtggctcaggccacacgcacagacctcccaccccctcca ccgccccctgtacactaccaggactttgattcccagcccgacctgcccctacccccccct ccctcggcctcccagcagcaggcagcagccgccgaccgcaagaagcgagaggagcagcag cgctggtatgagaaggagaaggctcggttagaggaggagagggagaggaagaggagggaa caggagaggaagctgggacaggtccgtaacccatccatgcctgtagcccacaacaacaac aaccaacatgggggaacactcccccctcccacacagcactatcagatgccccctccccag tcccccatgccaatgcagcaggtgcccttgccctacttccccccccagggccaacagcag gcccagcagcagcagccccccaggcccgagaaactgtccactctgcccagagcgacgacc ctgccccctcagggtaacccaatggacacagtgatcagagagctgctcccccagcagcag ccccgcaccatcgagcgccgggacctacagtacatcaccatcagcaaggcggcgctgtcc tccagcgacagcctgtccccagacccctggaagagagacgcccgggagaagctggagaag cagcagcagctgcacatcgtagacctgctggacagggagatccaggacctgcaggctaag ccggagcgtacggccgaggagagcgaccggctcaggaagctgatgctggagtggcagttc cagaagagactgcaggagtccaagcagagtgatgaggaagatgaggaggatgacgacgag gacgtggactccatgatgatcatgcagcggctggaggcggagaagagagcaaggttgcag gatgaggagcggcggaggaagcagcagctggaggagatccgtaagcgcgaggcggaggac cgggccaagcaggaggaggagagacgctggagagaggaggagagggccagacgagaggtt gatgagaagaggaggcaggaggaggagtactacacacgtctggaggaagggcggcgccgg cagcacgaggaggccgagcgcaagctgctgacccctgacgagcctggtctgtacagacct cccctccccagggactaccagcctcagcccccccctcccactgcatcccccgcaaccact gccactaacgctccaccacccccgcctcagagaaacgcatcctacctcaaaacccaggtc gtctcccctgacgccttgtacactgccaagtttgtctcgtacaatgacgaggaggaggag gacgctgcaggatttcattcatacactggaaacacaaccggggttctaggatcagaagaa ggttacaaggacctgcgagagaagtggacaaaaggtggtcaagaacaggaaaacacttta actggagaagcgccagagagtatgaccttcaaggagcgccagcggctcttttcccaaggg aaggaggtgtctaacaaagtcaaggcctcacggaaactcatggagctggaaaatgaactc aatacaaagtag

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