Oncorhynchus mykiss (rainbow trout): 110521142
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Entry
110521142 CDS
T07259
Symbol
neil1
Name
(RefSeq) endonuclease 8-like 1 isoform X1
KO
K10567
endonuclease VIII-like 1 [EC:3.2.2.-
4.2.99.18
]
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Pathway
omy03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
110521142 (neil1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
omy03400
]
110521142 (neil1)
Enzymes [BR:
omy01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
110521142 (neil1)
DNA repair and recombination proteins [BR:
omy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
110521142 (neil1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neil1-DNA_bind
Fapy_DNA_glyco
H2TH
Motif
Other DBs
NCBI-GeneID:
110521142
NCBI-ProteinID:
XP_036825267
LinkDB
All DBs
Position
30:complement(1155519..1167894)
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AA seq
387 aa
AA seq
DB search
MPEGPELHLASLFVNRMCGGVVFTGPVQKSEVSKNPEVSFSCPAYTIIATSRGKEVRLTL
TPQKSDSAQGRCRRGKTGQVNQVQTMDIVFRFGMSGFFRFTTEAELPKHSHLRFYTNEKP
CRVLSFVDTRRFGSWQPNGTWQLNRGPCIMFEYLSYRENVLSHLSDRAFDRPICEVLLNQ
KYFNGIGNYLRAEILFRLNIPPFVKARTVLEGLQTHLSDEDRKSVVKVEVTDTEVKEEVT
NTEVKEENTDREISDRAAVKEDESETPDLLRLCHTVPLEVIKLGGKGYDPEKMDYTDFKS
WLQCYCVKGMKSVRDHNGRTMWFKGDPGPMAPKDAKTKMIVKKEDDHDYKGGKKVKKARS
ESTVKPKYIKETVQEKEVPQRRAGRRK
NT seq
1164 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagggtccagagttacacttggccagtctgtttgtcaacaggatgtgtggggga
gtggtcttcaccggcccagtacaaaaatcagaggtcagtaagaaccctgaggtctccttc
tcctgcccggcctacaccatcatcgccacctccagaggcaaggaggtccgcctcactcta
accccccagaagagtgactctgcccaggggagatgcaggcgggggaagacaggtcaggtc
aaccaggtccagaccatggacatcgtcttccgtttcggaatgtctggattcttccgtttc
accacggaggcggagcttcctaaacattcccacctgcggttctacaccaatgagaagccc
tgtagggttctgagctttgtggacacacgccgctttggcagctggcaacccaacgggacc
tggcaactcaaccgagggccctgtatcatgtttgagtacctgagctacagggagaatgtc
ctttcccacctgtccgacagagcgttcgaccggcccatctgtgaggttctgttgaaccag
aagtactttaacggcattggcaactacctgagagctgagatcctctttagattaaacatc
cctccctttgtgaaggctcggacggttctggaaggacttcaaacacatctgtccgacgag
gaccggaagtcagttgttaaagtggaggtcacagacacagaagtcaaagaggaggtcacc
aacaccgaggtcaaagaggagaacaccgacagagaaatctcagacagagctgctgtgaag
gaggatgagagtgagactccagacctgctccgtctctgtcacacagtacctctggaggtc
atcaagttaggtggtaaaggttacgacccagagaaaatggactacactgactttaaatcg
tggctccagtgttactgtgtgaaggggatgaagtctgtaagagatcacaacggcagaact
atgtggttcaagggagatccaggtcccatggctcctaaagatgccaaaacaaagatgata
gtgaagaaagaggatgaccatgattataaagggggaaaaaaggtaaagaaggcccgctct
gagagcacggtgaagccaaaatacataaaggaaacggtgcaggaaaaggaagtccctcag
agacgggcaggaaggaggaagtaa
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