Oncorhynchus mykiss (rainbow trout): 110521207
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Entry
110521207 CDS
T07259
Name
(RefSeq) DNA-binding protein RFX7
KO
K09175
DNA-binding protein RFX7
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110521207
Transcription factors [BR:
omy03000
]
Eukaryotic type
Other basic domains
RF-X
110521207
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFX_DNA_binding
RFX5_N
Pox_D5
DUF3602
WHD_Cdc6
Motif
Other DBs
NCBI-GeneID:
110521207
NCBI-ProteinID:
XP_036824317
UniProt:
A0A8K9XHP1
LinkDB
All DBs
Position
30:complement(6297233..6323060)
Genome browser
AA seq
1792 aa
AA seq
DB search
MADDDDQQQPGQLKPNSGLGSLPTLVPGLQGPEANALQYKIKNSICKSVQSKVDNILQDV
EKFTDIEKLYLYLKLPSGPNNGIDKRTENQRASTPGLCDQSGMSSSRTQQMYAFNWIRNH
LEEHPETSLPKQEVYDEYKSYCDSLAYHPLSAADFGKIMKNVFPNMKARRLGMRGKSKYC
YSGLRKKAFVHMPSLPNLDLQKSDDGCELMEPSSGQSPSAEDEMRSAACGLVCEWAQKVL
SRQFDAVEDLARFLLNSHYIGTKSMAALTVMTGAPTGLKTPTPTSAFVPTSEASSFQPQV
KTLASPSVDAKQQLQRKIQKKQQEQKLQSPLPGEAQGQNQARRTEASTPGPAIPCGSPAL
LSPQPTIGIVVAAVSSPITVQRSRQLMTSPSPVGSAEGKVLPTVNFQVVTHTQSLTHRQS
PKTPQNISASPVGDRLARHRYPQILPKPSATGAITLRSPPTLLITNSPMKTHHVVKMTAI
SLAPSNTLSTSSNSMVLRPASAGVGTTTTTTTFTTIAALEEVQQQGQSQGGPPAPATPQS
PAAWPGAPPSTPIPTVVPEAIITDNTPGCNSDKRSTIKQSPCGAKGPERATKYRAASEPS
LMVKCSPGPDRVTARTKSVSFSSTSPPAAATNAAIKWAGPQQDSNKSIIATTCHQESPLY
LTVAPSANQNTPNVSGMSSSSNGSSAVTLLSPKDSSFGVKSPRKRAGPGLDSSHVIPVKR
VFISQQPLSVTFDPKPWVPARPGTPARPESAPCRVTVKQHLMPTKILALSDSPVTNADIS
SLSSSQAVVSVKPQVSSLLVVKREDPSSRGLTLSTVSSHTSSTAAPDSTTTTVSEQQQHS
GASVSVMAVGAQHQSEASVSVMAVGAQHQSEASVSAMAVGAQHQSEASVSVMAVGAQHQS
EASVSAMAVGAQQQSEASVSVMAVGAQCQSEASVSVMAVGSQQQSEASVSVIGDIKSTMW
EESAAGQPEELQKQTFSQNIPADHTKQQALGSTMNQHQLPNIMSQTSDSSDQLSGLHQEM
VDFASSASQHGSTMDYFSFNDDDMTQDSIVEELVQMEEQMKLKGLQPLFSSCVDNISLQG
QPGGPQGSILNTHHQGDSSSFYQSAHSSTTPIQTPTPTPTPTPTPTPTEMTLGGHGLTRE
SPCCHHSMAPITPVEGPLGGRHTPISALSNCSSGIPPSPVECRNPFAFTPINSSMAGGYH
DASVVSVSSSPIKPMQRPMATHPDKAKLEWINNRYNSSGTEATGGVGAGPGSGLSISNHS
LGGLLPSYQDLVDDHFRKPHAFAVPGHSGQSFQSQSRLQDGEHFSPISPVQQQMTSVSTT
PTNTPTKQDERFAVPAPLDNKGGASSSGGGTFRCRSVSPAVRQRTFSGTGTTTQLVVSPF
SSPMTSSEILSFLSNSQSVGSNLHSMAQRSQSVPLNIMMQSVVEMELLPVEMQAIQGQNQ
SNANKITNVLLSKMDSGVDDTVRGLGINNFPSNYTARMNLTQMLETQSQSQATNGSFTTG
RGGGNTHQSHLQLQTVSSSPASFDLQQHGGYLTSAGGGGGGVSFSSGDNQAQSGPGENVD
LELQQIQGLQELQTQTQLQSQARLLQSPQLQGGLQLLQTQTQLQSQARLLQSPQLQGGLQ
LLQTQTQLQSQARLLQSPHPQLQLLQTQSQVLLQPTPTQQQQDDDAQQQLDFNNTVKDLL
GDDGLNVDAEGLNPSSQLVGQVASELNAAVVSDFTNDIRLTSDLSNSITDLNTLDANLLF
NPSNQQQEQYEDATLEELKNDPLFQQICSDTVNSSFDWLESKDQPTTVEMLG
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggccgatgatgatgatcaacaacaacctggtcagctgaagcccaactcgggattgggc
tctcttccaacgttagtaccaggactacagggccccgaggccaatgcgttgcagtacaaa
ataaagaattcaatttgcaaatctgtacaatcaaaagtggacaacatattgcaagatgtt
gagaagtttacagacatcgagaaactctacctctaccttaagttgccttctggtcccaac
aatggcattgataaaaggactgagaatcagagagcctccactcctggactatgtgaccag
agtggcatgtcgtccagccgaacacagcagatgtacgctttcaactggatccgcaatcac
ctagaggagcaccctgagacatcactgcctaagcaagaggtgtacgacgagtacaagagc
tactgtgacagtcttgcctaccacccactgagtgctgcagactttggaaagatcatgaag
aacgtctttcccaacatgaaggctcgccgcctgggcatgagaggcaaatctaaatactgt
tatagtggactgaggaagaaagcttttgttcacatgccttctctgcccaacctggactta
caaaaatcagatgacgggtgtgagttaatggagccgtcgtcgggccagtctcccagtgcg
gaggatgagatgcgctcagcggcctgtggcttggtgtgtgagtgggctcagaaggtcctc
agcagacagtttgatgccgtggaggacttggctcgcttcctgctcaacagtcactacata
ggaaccaagtccatggctgccctcaccgtcatgactggggctcccacaggtctaaagacg
cccacgccaacctctgcgttcgtgcccacgtccgaggcctcgtccttccagccgcaggtg
aagacgctggcctctccctcggtagacgccaagcagcagctccagagaaagatccagaag
aaacagcaggagcagaagctccagtcccccctgcctggagaggcccagggacagaaccag
gccaggaggaccgaggccagcaccccagggccagctatcccttgtggaagtcctgctctg
ctctcaccacaacctaccattggtatagtggtggcagctgtctccagtcccatcacggtc
cagaggagcagacagctgatgacttcccctagcccagtgggatccgccgaggggaaggtc
ctgccaacggtcaacttccaggtggtcacccacacccagtctctgacccacaggcagtcc
ccgaagactccccaaaacatctcagccagccccgtgggcgaccgcctggccaggcacagg
tacccccagatcctccccaagccctcagccacgggggccatcaccctgcgttcgcccccc
accctgctcatcacaaacagccccatgaagacccaccacgttgtcaagatgaccgccatc
tccctggcccctagcaacactctcagtaccagcagtaacagtatggtcctcaggccagct
tcggccggggtgggaaccaccaccaccaccaccacctttaccaccatcgctgccctagag
gaggttcagcaacagggacagagccagggaggccccccagccccagccaccccccagtcc
cctgcagcatggcctggcgccccaccctccacccctattcccacagtggtccctgaggcc
atcatcactgataataccccgggctgtaactctgataaacggagcaccataaagcagtcc
ccctgtggggccaaaggtccagagagagccaccaagtaccgggcggccagcgaaccctcg
cttatggtcaaatgctcaccaggacctgacagagtgaccgctaggaccaaaagcgtctca
ttctcctccacctctcctccagctgctgccaccaatgcagcgatcaagtgggcggggcct
cagcaggacagcaataagagcatcatcgccaccacctgtcatcaagaaagtcctttgtat
ctgactgttgctccctcggccaatcaaaatactcctaacgtcagcggaatgtcctcctcg
tccaatggctcgtcggctgttaccttattgtcccctaaagactcctcgtttggggtcaag
agccccaggaagcgggccggccccgggctggattcctcccacgtcatccctgtgaagcgc
gtcttcatctcccagcagcctttgagtgtgacctttgaccccaaaccatgggttccagct
agacctggcactcctgccagacctgagagtgccccctgtcgagtgacagtgaaacaacac
ctaatgcccacgaagatcctggcgctgtccgactcgcctgtcacgaacgcagacatctcc
tccctctcttcctcgcaggctgtcgtcagtgtgaagccacaggtctcctcgttgctggta
gtgaaacgcgaagacccgtcctctcgaggactaacactaagcactgtcagcagtcacacc
agcagcactgcagcccctgatagcaccaccaccacagtgtctgagcagcagcaacactct
ggggcctctgtctctgtgatggcggtaggagcacagcatcaatctgaggcctctgtctct
gtgatggcggtaggagcacagcatcaatctgaagcctctgtttctgcgatggcggtagga
gcacagcatcaatctgaggcctctgtctctgtgatggcggtaggagcacagcatcaatct
gaggcctctgtctcagcgatggcggtaggagcacagcaacaatctgaggcctctgtctct
gtgatggcggtaggagcacagtgtcaatctgaggcctctgtctctgtgatggcggtagga
tcacagcaacaatctgaggcctctgtctctgtgatcggggatataaagagcacaatgtgg
gaggagtcagctgcggggcagccggaagagctgcagaaacagaccttcagtcagaatata
ccagcagaccacaccaagcagcaggccctgggctccaccatgaaccaacaccaactccca
aacatcatgtcccagacctcagactcctctgatcagttatctggccttcaccaggagatg
gtggactttgcctcctcagcctcccagcacggctccaccatggactacttctcctttaac
gatgacgatatgacccaggacagcatagtggaggaactggttcagatggaggaacagatg
aagctgaagggcctccagccgttgttcagtagctgtgtggataatatctctctccaggga
cagcctgggggcccccaggggtccatcctcaacactcaccaccagggggatagttcctct
ttctaccagtctgcccatagcagcacaacccccatccagactcccaccccgactcccacc
ccgactccaaccccgacccccaccgagatgactctcggtgggcacgggctgaccagagag
agcccctgttgccatcacagcatggcccctatcacgcccgtggaggggcctctaggaggc
cgacacacccctataagcgctctgtctaactgttctagcggcattccgcccagccctgtg
gagtgcaggaacccgtttgccttcacccctatcaactccagcatggcagggggttaccac
gatgcctccgtggtgtctgtctcctccagtcccatcaagcccatgcagagacccatggcc
acgcacccagataaggctaaactggagtggatcaacaaccgctacaacagtagtggtact
gaagctactggaggagtcggagcagggccagggtctgggttatccatctctaaccacagc
cttggtggactcctgcctagttaccaggatctagtggatgaccatttccgtaagccgcac
gccttcgctgttccgggccacagtggccagtctttccagtctcagtccagactgcaggat
ggcgaacacttctctcccatctccccggtgcaacagcagatgaccagcgtgtcgaccacg
cccaccaacactccaaccaaacaggatgagagatttgctgtgcccgcccctttagacaac
aagggcggagcctcatcgtcggggggcgggacgttccgttgccgtagcgtcagccccgcc
gtgcgccagaggaccttcagcggcactggcacaaccactcaattggtcgtctcccctttc
agctcccccatgacctcctccgagatactcagcttcctgtccaatagccaatcggtgggc
agtaacctccacagcatggcccagcgcagccaatcggtgcccttaaacatcatgatgcag
agcgttgtggagatggagctgcttcctgtagagatgcaggccatccagggacagaaccag
agtaatgccaataagatcaccaacgtcctcttgagtaagatggactctggcgtggacgac
acagtcaggggcctgggcatcaacaacttcccctccaactacactgcccgcatgaacctc
acccagatgctggagacccagtctcagagccaggccaccaatgggagcttcacaaccgga
aggggaggaggtaacacccaccaatcccaccttcagctgcagaccgtcagctccagccct
gcctccttcgacctccagcagcatgggggctacctcaccagcgctggaggaggcgggggt
ggggtgagcttctcctctggagacaaccaagcacaatcaggtcctggtgagaatgtggat
ctggagctccagcagatccagggcctccaagagctccagacccagacccagctccaatcc
caggctagactgctccagagtccccagctccagggtgggctccagcttctccagacccag
acccagctccaatcccaggctagactgctccaaagcccccagctccagggtgggctccag
cttctccagacccagacccagctccaatcccaggctagactgctccagagtccccatccc
cagctccagcttctccagacccagtcccaggtactcctccagcccacccccacccagcag
cagcaggacgatgacgcccagcaacagctagacttcaacaacactgttaaagacctgtta
ggtgacgacggcctcaacgttgacgctgaaggcctcaaccccagctctcaactggtcggt
caggtggcgtcagagcttaatgccgccgtggtgtccgacttcaccaatgacatcaggttg
acctccgacctttccaacagcatcactgacctgaacacactggacgccaacctcctgttc
aatccgtccaatcagcagcaagaacagtacgaagacgccacactggaagagctgaagaac
gatcctctgtttcagcagatatgtagtgatactgtgaactcctcgttcgactggctagag
agcaaagaccagcctactaccgtagagatgttgggctaa
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integrated database retrieval system