Oncorhynchus mykiss (rainbow trout): 110521351
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Entry
110521351 CDS
T07259
Symbol
cdhr5b
Name
(RefSeq) cadherin-related family member 5 isoform X1
KO
K16505
cadherin-related family member 5
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
omy04515
]
110521351 (cdhr5b)
Cell adhesion molecules [BR:
omy04515
]
Cadherins
Cadherin related
110521351 (cdhr5b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
DUF6039
Motif
Other DBs
NCBI-GeneID:
110521351
NCBI-ProteinID:
XP_021454527
Ensembl:
ENSOMYG00000044274
UniProt:
A0A8C7UQ15
LinkDB
All DBs
Position
30:13236969..13250964
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AA seq
748 aa
AA seq
DB search
MEKKYPHFTLRTLLSFLLVFLLHRSTEAQQICSMPGATPPTIRENNVVGAVVTTITTEEG
VTLTIVSNPADSFGLNGNDLTAIKVLDYETKTSFTIDLLCKKGDQFLTLIVVVLIENVND
NPPVFAESQYTLNVDELSPVGKSVGAFEATDADKDRLYYSLVPDTEGFKLQENSPNILVQ
RVLDYDAVTSVTLILSAQDTPTSTPPSFTATATIHVIIMDIDNRPPWFQPCTETIVDMSK
ICLSSGYTGTVNLTEQEVGALPLLPGPVHAIDGDKGLNVPIMYTFPTGSESDIFQINQIT
GDITMLKAADIAGPLTLTVLALQTSNGDQFATTTVTIVVVKKSVNPPQFEKMEYEGFISA
DAGVDSMVLESKASNRPLKVQAKDTDYADGINPDVRYEVQGSTEFSITPQGFILMTKNVM
PGTVSMNLHAIDSSNAESTTASLKVEVMPGITTMAPTTTDMATTVMATTDMATTDMATTV
MATTDMATTDMATATHAAINSTTEGVLGAPGGYGPGDMAALGASLAVLLVISMVVIGLLV
FRIQKGKTDWRKLSEANIFRSSLGKGPGELKNGVQYTNEGFQNDGDTSSVGSKGPEEMDG
KRSIGNGVTSRAVEETVMKVSAPLYSNLLLDTSSLAGSDKADSEKEVKPILTKERRVEEG
YKSVWFKEDIDPNAKEEVVIIPDNGEREGDDDDDDDDEEEEGFREEEEEYDNSSPKTPKV
LFSDADMDDGRGVKFEASEKEKIQTSDL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggagaagaaatatccacactttactttgaggaccttgttgagctttctgcttgtgttt
ttgcttcacagatcaactgaagcgcaacagatatgctccatgcctggggcaacgcctccc
actattagagagaacaacgttgttggtgctgttgtgaccacaatcaccacagaggaagga
gtgaccctaactattgtcagtaatcctgcagactcttttggtctgaatggcaatgatctt
acagcgataaaagttttggactatgagactaaaacatctttcaccattgaccttctttgt
aaaaaaggtgaccaatttctcactctaatagtagtggtacttattgagaatgtgaatgac
aacccgccagtatttgcagaaagccagtacactctcaatgtcgatgagttgtcacctgta
ggcaaaagtgtcggtgcatttgaagcaacagatgcagataaggatcgactctattacagc
ctagtgccagatacagagggttttaaactgcaagaaaacagcccaaatatactagtgcaa
cgtgttcttgactatgacgcagtgacaagtgtgacacttatattatctgctcaggatacc
cccacatccacaccaccttcattcactgccacagccactatccatgtcatcatcatggac
attgacaaccgtccaccatggtttcagccctgcacagaaaccatagttgacatgtccaaa
atctgcctcagctctggatatacaggaacagtcaacttaacagagcaagaggttggtgca
ttgccattgctgccaggtccggtgcatgccattgatggtgacaaaggcttaaatgtgccg
ataatgtacacatttccaaccgggtctgaatctgacattttccagatcaatcagatcact
ggggacatcaccatgttgaaggcggcagatatagcgggtccactgaccttaacagttttg
gctttacagacatccaacggtgaccagttcgcgaccacaacggtcactatcgttgttgtg
aaaaagagtgtgaacccaccgcagtttgagaagatggagtatgagggcttcatctctgca
gacgcgggcgtagacagcatggttctggagagcaaagcctccaacaggccactcaaggtc
caggccaaggacacagactatgctgatggcatcaaccctgatgtgagatatgaggttcag
ggaagcactgaattctccattaccccgcaaggcttcatcctcatgactaaaaacgttatg
ccaggcactgtttccatgaatttgcatgccatcgactcatccaatgcagaatcaactaca
gcatctctcaaggtggaggtcatgccagggattacaaccatggccccaaccaccactgac
atggccaccactgttatggccaccactgacatggccaccactgacatggccaccactgtt
atggccaccactgacatggccaccactgacatggctactgccacccatgccgccatcaac
tccacaacagaaggggttcttggggccccaggtggatatggtcctggggacatggctgcc
ctgggtgcaagcctggctgtgttactggtgatctctatggtcgtcatcggcctgctcgtc
ttccgcatccagaagggcaagacagattggaggaagctgtcagaggccaacatcttccgt
agctctcttgggaaaggtcccggcgaactcaagaatggggtgcagtacaccaacgagggc
ttccagaatgacggagacactagcagtgtgggatccaaaggcccagaggagatggatggg
aagcggtccatcgggaatggagtgacctccagagctgtggaggagactgtcatgaaggtc
tcggctcccctgtactccaaccttctgcttgacaccagcagcctggcagggtctgataag
gccgacagcgagaaggaggtgaagcccattctgaccaaggagaggcgtgtggaggagggc
tacaagtcagtctggttcaaagaggacatcgaccccaatgccaaggaggaagtggtcatc
atacctgacaatggggagcgggaaggtgacgacgatgatgatgatgatgatgaggaagag
gaggggtttagagaggaggaagaagaatatgacaactcgtcaccaaagaccccaaaggtg
ttgttctctgatgctgatatggatgatggccgtggagtgaagtttgaggcttctgagaaa
gaaaagatccagacgtctgacctgtga
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