Oncorhynchus mykiss (rainbow trout): 110521482
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Entry
110521482 CDS
T07259
Name
(RefSeq) nuclear receptor ROR-beta
KO
K08533
RAR-related orphan receptor beta
Organism
omy
Oncorhynchus mykiss (rainbow trout)
Brite
KEGG Orthology (KO) [BR:
omy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
omy03000
]
110521482
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
omy03310
]
110521482
Transcription factors [BR:
omy03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
110521482
Nuclear receptors [BR:
omy03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
110521482
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
110521482
NCBI-ProteinID:
XP_021454733
Ensembl:
ENSOMYG00000000914
UniProt:
A0A060X1I6
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All DBs
Position
30:complement(18920767..18943534)
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AA seq
471 aa
AA seq
DB search
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAIYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQASQELTAAREEGGEVGGHS
RAYSRGSSAALSDLDDITLPDGLLCDLPLTPEGAEREFCNLEMMGGSGGSSSSSQSSPEQ
NRLDFGDSNHHIKHEYQLLHESGLFTHALLNPLPEGFSMLEIERITASVVKSHIETSQHG
SEELKRLIWSLYTPEETRSFQSRSAEVMWQQCAIHLTNAIQYVVEFAKRITGFLDLCQND
QVILLKAGCLDVLLIRMCRAYNPINNTILFDSKFASAQTFKALGCDDLVGAVFDLAKSLS
RMQLSEEEMALFSASVLLSPDRPWLTDRQQVQKLQEKVYLALQHCLHRGGSSEEKLAKMV
SKLPMMKSICNLHIDKLEFFRLLHPETAFNFPPLYREVFSSEITFPDSTMD
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgagagcacaaattgaagtaataccctgcaagatctgtggggacaagtcatcagggatc
cactatggtgtaatcacctgcgaaggctgcaagggcttcttccgacgcagccagcagaac
aatgctatatactcctgttcccggcagaggaactgtctgattgaccgcaccaaccggaat
cgctgccaacactgccggctgcagaagtgcctggccctaggcatgagccgtgatgcggtg
aagtttggccgcatgtccaaaaagcagagagacagcctgtatgctgaggtccagaagcac
caggcgtcccaggagttaactgccgcccgtgaggagggaggcgaggtcggaggtcacagc
cgggcatacagcagaggctccagtgccgctctcagcgaccttgatgacatcaccctgcca
gacggcctgctgtgtgacctgcccctgacaccagagggcgctgaaagagagttctgcaat
ctggaaatgatggggggaagcgggggtagcagctcctcctctcaaagctcacccgaacag
aacagactggacttcggagacagcaaccaccacatcaagcacgagtaccagctgctgcac
gagtccgggctgtttacacacgcactgctcaaccctctacccgagggattctccatgctc
gagattgaacgtataactgctagtgtggtaaagtctcacatagagaccagtcagcacggc
agtgaggagctgaagaggcttatctggtccctgtacacccctgaggagacacgcagcttc
cagagcaggtctgcggaggtcatgtggcagcagtgtgccatccacctcaccaatgccatc
cagtacgtggtggagtttgccaagcgcatcactggattcctggatctctgtcagaacgac
caggtcattcttctcaaagcaggatgtctggatgtgcttctgattcgcatgtgtcgcgcc
tacaaccccatcaacaacactattctgtttgatagcaagtttgctagcgcacagaccttc
aaagctcttggttgtgatgaccttgtgggtgctgtgtttgacctggccaagagcctgagt
cgtatgcagctctctgaagaggagatggctctgttcagtgcttctgttctcctgtcacca
gaccgaccatggttgacagacaggcaacaggtacagaagcttcaagagaaagtatatctg
gctctgcaacattgtctacacagaggtggctcatcagaggagaaactggcaaagatggtg
tccaagcttcccatgatgaagtccatctgtaatctacacattgacaagctcgagtttttc
cgtctgctccacccggagactgcattcaatttcccccctctgtaccgtgaggtgttcagc
agtgaaatcaccttcccagactccacaatggactaa
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